DY263184

Overview
NameDY263184
Unique NameDY263184
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1214
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG21_PICAN (Autophagy-related protein 21 OS=Pichia angusta GN=ATG21 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.181e-23
Identity = 79/250 (31.60%), Postives = 120/250 (48.00%), Query Frame = 1
Query:  283 LISVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLA--NPRGLCCL-----------SHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKITVL--------LCLQTSNG 969
            L S+S+NQDY C AAG    +++YNC+PF E F++    GG  +VEMLF  +++A+VG GD       K+ I +  +   I E  F + +  VK++R R+VVVL  +I+VY    +KLLH IE  A  + R +C L              SS  + A  G     V  +   +  I +I  H S +                 +GT++R+F      ++ E RRG   A+I+ L        LC  ++ G
Sbjct:    3 LRSISFNQDYTCLAAGFDAAYKVYNCDPFGECFQK-ADDGGANLVEMLFSTSLIAVVGIGDKPANTMRKLKIINTKRKAVICELTFPTAILYVKMNRKRLVVVLVDQIFVYDVSCMKLLHSIEASAGLDDRIICDLCADDESVLVFQQSGSSDELAANAGT---VVVFDALQIQPINVIECHRSPLQRIAVSKDGRLLATASVKGTIVRVFRVADGRKVHEFRRGSYTAQISCLSFNVDATVLCCSSNTG 248          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_EMENI (Autophagy-related protein 18 OS=Emericella nidulans GN=atg18 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.014e-23
Identity = 84/271 (31.00%), Postives = 126/271 (46.49%), Query Frame = 1
Query:  292 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRG---------------LCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKI--------TVLLCLQTS 963
            V++NQDY   A  TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +VKL+R R+V+VLE +IY+Y    +KLL+ IET  NP G               LC LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+     +L + RRG   ++I        + LLC+ +S
Sbjct:    6 VTFNQDYSYLAVATSKGFRIFTTDPFAKSY--ETKDGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVKLNRKRLVIVLEDQIYLYDIQTMKLLYTIETSPNPNGKVSVQLNEPSLTPTALCALSPSSENCYLAYPLPQKAAPSSFNPPAHAPPGNTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLIATASDKGTIIRVFSVPDGHKLYQFRRGSIPSRIFSMSFNTTSTLLCVSSS 267          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_COCIM (Autophagy-related protein 18 OS=Coccidioides immitis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.014e-23
Identity = 73/256 (28.52%), Postives = 126/256 (49.22%), Query Frame = 1
Query:  292 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKI--------TVLLCLQTS 963
            V++NQDY   A GTS GFRI+  +PF +++  + K G   I+EMLF  +++A++         P ++ I +  +   I E  F + V +++L+R R+V+VLE +IY+Y    +KL++ IET  NP  +C L+  S    LA P  Q+                       G+V I + + L  + ++ AH S ++                +GT+IR+F+     +L + RRG   ++I        + LLC+ ++
Sbjct:    6 VTFNQDYSYLAVGTSKGFRIFTTDPFGKSY--ETKEGNIAILEMLFSTSLVAVI-------LSPRRLQIMNTKRQSVICELTFPTTVLAIRLNRKRLVIVLEDQIYIYDIQTMKLVYTIETSPNPNAICALAPSSDNCYLAYPLPQKAPPPSFSPPSHGPPSNTHIPPTSGEVLIFDAYKLEAVNVVEAHKSPLSFLALNSEGTLLATASDKGTIIRVFSVPAAHKLYQFRRGSMPSRIYSMSFNITSTLLCVSSA 252          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_ASPFU (Autophagy-related protein 18 OS=Aspergillus fumigatus GN=atg18 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.014e-23
Identity = 81/263 (30.80%), Postives = 126/263 (47.91%), Query Frame = 1
Query:  292 VSWNQDYGCFAAG-------TSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQR-----------------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKI--------TVLLCLQTS 963
            V++NQDY   A G       TS GFRI+  +PF +++  + K G   I+EMLF  +++AL+         P ++ I +  +   I E  F + V +V+L+R R+V+VLE +IY+Y    +KLL+ I+T  NP  +C LS  S    LA P  Q+                       G+V I +   L  I +I AH S +AC               +GT+IR+F+     +L + RRG   ++I        + LLC+ +S
Sbjct:    6 VTFNQDYSYLAVGSVSPPSATSKGFRIFTTDPFAKSY--ETKEGNIAIIEMLFSTSLVALI-------LSPRRLQITNTKRQSTICELTFPTTVLAVRLNRKRLVIVLEDQIYLYDIQTMKLLYTIQTSPNPNAICALSPSSDNCYLAYPLPQKAPPSSFNPPSHTPPGTTHVSPTSGEVLIFDTLKLEAINVIEAHRSPLACITLNSDGTLLATASDKGTIIRVFSVPDGHKLYQFRRGSMPSRIFSMSFNTTSTLLCVSSS 259          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: WIPI4_RAT (WD repeat domain phosphoinositide-interacting protein 4 OS=Rattus norvegicus GN=Wdr45 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.631e-23
Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 1
Query:  289 SVSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKS-GGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDD------HQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRI 747
            S+ +NQD  CF      G RIYN EP  E    D +  G   +VEML R N+LALVG G + ++    V+IWDD       + + + EF F   V +V++  D+IV+VL ++IYVYSF D  + L + +T  NP+GLC L       +L  PG + G +++
Sbjct:   11 SLHFNQDQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVGLVEMLHRSNLLALVGGGSSPKFSEISVLIWDDAREGKDSKDKLVLEFTFTKPVLAVRMRHDKIVIVLRNRIYVYSFPDNPRKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQL 171          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: HSV2_EMENI (SVP1-like protein 2 OS=Emericella nidulans GN=hsv2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.631e-23
Identity = 69/186 (37.10%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  421 MLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVD-LKLLHQIETLANPRGLCCLSHHSSTSVLACPGLQRGQVRIEHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKITVLLCLQTSNGWL 975
            ML + N LALVG G   ++P  K++IWDD + + +    FR+ V  V+LS+ RIVV L + I+ + F    K L   ET  NP GL CL       VLA PG   GQV++       + +I AH + +                  GTL+RIF T  C ++ E+RRGVD A I   L +  SN  L
Sbjct:    1 MLGQSNYLALVGGGRQPKFPQNKLVIWDDAKQKVVITLEFRTSVLGVRLSKSRIVVALLNSIHTFVFSSPPKKLAVFETTDNPLGLACLGQ----KVLAFPGRSPGQVQLVELETGNVSIIPAHSTPLRAMALSPDGEVLATASEAGTLVRIFATSNCAKMAELRRGVDHA-IIFSLAISPSNNLL 181          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_KLULA (Autophagy-related protein 18 OS=Kluyveromyces lactis GN=ATG18 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 2.631e-23
Identity = 54/143 (37.76%), Postives = 90/143 (62.94%), Query Frame = 1
Query:  292 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 720
            +++NQ+  C + GTS GF+I+NCEPF   ++ +   GG  IVEMLF  ++LA+VG GDN    P ++ + +  +   I E  F + + SVK+++ R+ V+L+ +IY+Y   +++LLH IET  N +G+  +S +S  + L  P
Sbjct:   10 INFNQNGSCISMGTSQGFKIFNCEPFGRFYQDE--EGGCGIVEMLFSTSLLAVVGMGDNPAMSPRRLRMLNTKRHSVICEVTFPTTILSVKMNKSRLAVLLQEQIYIYDISNMRLLHTIETSMNAQGIMSMSPNSENNYLVYP 150          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_SCLS1 (Autophagy-related protein 18 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=atg18 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.488e-23
Identity = 77/257 (29.96%), Postives = 125/257 (48.64%), Query Frame = 1
Query:  292 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP--------GLQR---------------GQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKI--------TVLLCLQTSN 966
            V++NQDY C A GT+ GFRIY+ +PF + F  D ++    I+EMLF  +++A+       +  P  ++I +  +   I E  F S V +V+L+R R  V+LE +IY+Y   ++ LL+ I T ANP  +C LS  S    LA P        G +R               G+V I +   L  + ++ AH + ++C                GT+IR+F+     +L + RRG   + I        + LLC+ +++
Sbjct:    4 VTFNQDYTCLAVGTAKGFRIYHTDPFSKIFTGDNEN--VTIIEMLFSTSLVAI-------KQSPRHIVIQNTKRGTVICELTFPSAVLAVRLNRKRFAVLLEEEIYLYDIQNMGLLYTISTSANPNAICALSASSENCYLAYPLPKPREETGDKRPAHAPPLSPYVAPTSGEVLIFDAKSLKAVNVVEAHRAPLSCIALNNDGTLLATASETGTIIRVFSVPDGQKLYQFRRGTYPSTIFSLSFNMSSTLLCVSSNS 251          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_PICPA (Autophagy-related protein 18 OS=Pichia pastoris GN=ATG18 PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.488e-23
Identity = 72/255 (28.24%), Postives = 117/255 (45.88%), Query Frame = 1
Query:  295 SWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP-------------------------------------GLQRGQVRI-EHFGLNMIKLINAHDSHIACFXXXXXXXXXXXXXXRGTLIRIFNTVGCTRLQEVRRGVDRAKITVL 945
            ++NQD  C + G   G++I+N EPF +     L      IVEMLF  +++A+VG G+     P K+ +++  +   I E  F + + +VK++R+R+VV+LE  IY+Y    +++LH IET +NP GL  LS  +  ++LA P                                      L+ G V I     L  I +I AH + ++                +GT++R+F+     +L + RRG    KI  L
Sbjct:   26 NFNQDSTCVSVGYQSGYKIFNVEPFTKCL--SLADTSIGIVEMLFSSSLVAIVGLGELPDSSPRKLKVFNTKRRSIICELTFPTSILAVKMNRERMVVLLEDTIYIYDINTMRILHTIETPSNPEGLIALSSSTENNILAYPSPPKLPNRQETSTKGTTNDNDRSHLENIPENVNANSSNLRNGDVIIFNSHTLQPISVIEAHKAQLSAIALSSDGTLLATASNKGTIVRVFDVETGVKLYQFRRGTYPTKIYCL 278          
BLAST of DY263184 vs. ExPASy Swiss-Prot
Match: ATG18_ASHGO (Autophagy-related protein 18 OS=Ashbya gossypii GN=ATG18 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 7.655e-23
Identity = 56/143 (39.16%), Postives = 88/143 (61.54%), Query Frame = 1
Query:  292 VSWNQDYGCFAAGTSCGFRIYNCEPFKETFRRDLKSGGFRIVEMLFRCNILALVGAGDNSQYPPTKVIIWDDHQSRCIGEFAFRSDVRSVKLSRDRIVVVLEHKIYVYSFVDLKLLHQIETLANPRGLCCLSHHSSTSVLACP 720
            +++NQ   C + GTS G +I+NC+PF   +  +   GG  IVEMLF  ++LA+VG GDN    P ++ I +  +   I E  F + + +VK++R R+VV+L+ +IY+Y    ++LL+ IET +NPRGL  +S     + LA P
Sbjct:   12 INFNQTGTCISMGTSEGLKIFNCDPFGRFYSDE--DGGCGIVEMLFSTSLLAVVGIGDNPSMSPRRLRILNTKRHSVICEVTFPTTILAVKMNRSRLVVLLQEQIYIYDINSMRLLYTIETSSNPRGLISMSPSLENNYLAYP 152          
The following BLAST results are available for this feature:
BLAST of DY263184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
ATG21_PICAN1.181e-2331.60Autophagy-related protein 21 OS=Pichia angusta GN=... [more]
ATG18_EMENI2.014e-2331.00Autophagy-related protein 18 OS=Emericella nidulan... [more]
ATG18_COCIM2.014e-2328.52Autophagy-related protein 18 OS=Coccidioides immit... [more]
ATG18_ASPFU2.014e-2330.80Autophagy-related protein 18 OS=Aspergillus fumiga... [more]
WIPI4_RAT2.631e-2338.51WD repeat domain phosphoinositide-interacting prot... [more]
HSV2_EMENI2.631e-2337.10SVP1-like protein 2 OS=Emericella nidulans GN=hsv2... [more]
ATG18_KLULA2.631e-2337.76Autophagy-related protein 18 OS=Kluyveromyces lact... [more]
ATG18_SCLS14.488e-2329.96Autophagy-related protein 18 OS=Sclerotinia sclero... [more]
ATG18_PICPA4.488e-2328.24Autophagy-related protein 18 OS=Pichia pastoris GN... [more]
ATG18_ASHGO7.655e-2339.16Autophagy-related protein 18 OS=Ashbya gossypii GN... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11AB11RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263184 ID=DY263184; Name=DY263184; organism=Citrus clementina; type=EST; length=1214bp
AGCGAAAGAGAAAATTTGATCTGATGATCATTAATTTGATTTCTCATATC
ACAGCATCAAGGGGGTGCCACTGAAATTATTCACAATCGAGAAGATTTTC
ATCTTTGATTGCTGCTGCTGCTGCTGACCGTTTCTTCGTCCCACATGACT
TCAACTGTTTCGACATCTCGAGAAATTCTTCCACCGGGCCCCTTTGGATC
CCCCAATGCTGGCGCTTCGGCTTCGGCTTCGGCTTCATTTGGCCACCCGC
AAACGGCGTTCAGTGATGTTGATGAAATTGAGTTGATCTCTGTGTCTTGG
AACCAGGACTATGGTTGTTTTGCCGCTGGAACTAGTTGTGGGTTTCGAAT
TTATAATTGTGAGCCGTTTAAGGAAACTTTTAGACGTGATTTGAAAAGTG
GTGGGTTTAGGATTGTTGAGATGTTGTTTCGTTGTAATATATTGGCACTC
GTTGGTGCTGGGGATAATTCTCAGTATCCTCCTACTAAAGTTATTATTTG
GGATGATCATCAGAGCAGGTGCATTGGTGAGTTTGCGTTTAGGTCTGATG
TTCGCTCTGTGAAATTGAGTAGGGATCGAATTGTGGTTGTTCTTGAGCAT
AAGATATATGTTTATAGTTTTGTTGATCTCAAGTTGCTTCATCAGATTGA
GACTCTTGCGAATCCGAGGGGGCTTTGTTGTCTTTCTCATCATTCGAGTA
CTTCTGTGTTGGCTTGCCCGGGTCTCCAACGTGGACAGGTTCGCATTGAG
CACTTTGGGCTCAATATGATAAAGCTAATAAATGCTCATGATTCTCATAT
TGCGTGCTTTACCCTCACATTGGATGGCCTGCTTCTTGCTACTGCTAGTA
CCAGGGGCACTTTGATAAGAATTTTCAACACGGTGGGATGTACTCGCTTG
CAAGAGGTTCGAAGAGGTGTTGACAGAGCAAAGATTACAGTATTGCTCTG
TCTCCAAACGTCCAATGGTTGGCTGTGGCAAGTGACAAAGGGACTGTTCA
TATATTCAGTCTTCAGGGTTAAAAGTGGTGGGCAAGGACTCCTCCTCCCT
CTCTTTCTATTCCTTTCTCAAAATAAAAAAACTTCCTAACCATTTCTTCT
TTCCTTTGAACCTTTTTTTTTTCTCCAGAACACGGGGGCCCAAACCTGGG
TTCATCCTTTTTCTTTTTTTTGAAAGAGAAGTTTTCTACAAAAAAATTTT
TTACCCCAAAAAAT
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