DY263222

Overview
NameDY263222
Unique NameDY263222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1338
Libraries
Library NameType
CitNFLcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSJ (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica GN=HOX9 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 2.902e-18
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1 
Query:  793 LDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +D+GKYVRYTPEQVEALER+Y ECP+PSS RRQQL+++CPIL+N EPKQ K   QN   +  + K+
Sbjct:   25 MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQRKE 90
[Close]
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX9_ORYSI (Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. indica GN=HOX9 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.902e-18
Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = 1 
Query:  793 LDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +D+GKYVRYTPEQVEALER+Y ECP+PSS RRQQL+++CPIL+N EPKQ K   QN   +  + K+
Sbjct:   25 MDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQRKE 90
[Close]
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSJ (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. japonica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 4.951e-18
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1 
Query:  790 SLDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            ++D  KYVRYTPEQVEALERLY+ECP+PSS RRQQL++ECP L+N +PKQ K   QN   +  + K+
Sbjct:    7 AMDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKE 73
[Close]
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: HOX29_ORYSI (Homeobox-leucine zipper protein HOX29 OS=Oryza sativa subsp. indica GN=HOX29 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 6.466e-18
Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = 1 
Query:  793 LDNGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +D  KYVRYTPEQVEALERLY+ECP+PSS RRQQL++ECP L+N +PKQ K   QN   +  + K+
Sbjct:    1 MDASKYVRYTPEQVEALERLYYECPKPSSLRRQQLVRECPALANVDPKQIKVWFQNRRCREKQRKE 66
[Close]
BLAST of DY263222 vs. ExPASy Swiss-Prot
Match: REV_ARATH (Homeobox-leucine zipper protein REVOLUTA OS=Arabidopsis thaliana GN=REV PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.716e-16
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 1 
Query:  799 NGKYVRYTPEQVEALERLYHECPQPSSFRRQQLIKECPILSNFEPKQTKFGSQNEEAKRSRGKK 990
            +GKYVRYT EQVEALER+Y ECP+PSS RRQQLI+EC IL+N EPKQ K   QN   +  + K+
Sbjct:   23 SGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPKQIKVWFQNRRCRDKQRKE 86
The following BLAST results are available for this feature:
BLAST of DY263222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
HOX9_ORYSJ2.902e-1863.64Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
HOX9_ORYSI2.902e-1863.64Homeobox-leucine zipper protein HOX9 OS=Oryza sati... [more]
HOX29_ORYSJ4.951e-1861.19Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
HOX29_ORYSI6.466e-1862.12Homeobox-leucine zipper protein HOX29 OS=Oryza sat... [more]
REV_ARATH2.716e-1664.06Homeobox-leucine zipper protein REVOLUTA OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA11AF06RM1 CitNFL Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY263222 ID=DY263222; Name=DY263222; organism=Citrus clementina; type=EST; length=1338bp
TCGATGAACCATCGAATCACTGGAAACGTCTGGTTCCAAGCGTTTTTATG
TTTTTGGGGGGTTTTCCTTCTGGAGTCGGAGAACCGGCTGAGTGGAATCG
GTGATTGAAACAAGACAACTCTTTGGCGCGAAACGTTTCGTCGGGGCTGC
TTGTTTTTTCGTGCTTTGGAAAACGCTGGAAATGTTTTTCTGAAACAGAT
CGTTGGGTATTGAGAGCTCTGATCTCGAAAGATTTATGCTTTATTGTGTT
TGGGGCTGTCTCATAGTAACAAAACAAGAATAACTGCGTACAAAATCAGG
ATATTCTTGTCTCTTGTCGGTTATCTCTATCCTTAAATCACTCAGTTAGC
ATTAAACAATACATGAGTTTGAAAATCTTACACTTAATTTATGGTATATA
TGCATTTTGGTTAAATCCCATTTGTGTTTGTTCGGTGCTTTTGAGCTTTG
CAGTGTCTGGATGAAGTATAAGTGCTGCAGTTTAGTTTAGTATAGTTTGT
GCTTGGCTTTTTGGTATTTTGAAGAGTACTTAGTGTTTCAGATTGTGTTT
CAAAGAAGATAAAGCACTTGAATAAGAGCTTCCAAAGCTTGTAAACTTGT
GGTTGGGTTTAGTATTTGGTAGATAATGTTTGTTTGAGGTTCACATTTGG
GTTTTTAATGCTTTAGATTTCAAAGAGAATAATTGAAATCGTGACAACAG
AAGAGCGGCTGCTTGTTGTCTGTGTGACCTTGTGAAGTTTGGTGGTGAAA
TTGAAGATGGCAATGTCCTGCAAGGATGGTAAGACTGGGAGCTTGGATAA
CGGCAAGTATGTAAGATACACACCTGAGCAGGTTGAGGCTCTTGAGAGGC
TCTATCATGAATGCCCCCAACCCAGTTCATTTCGCCGCCAACAGCTAATT
AAGGAGTGCCCAATTCTCTCTAACTTTGAGCCAAAGCAAACAAAATTTGG
GTCCCAAAACGAAGAAGCCAAGAGAAGCAGAGGGAAAAAACTTCCCGTCT
TTAACTGGGGAAATAAAACCTGAAAGCGATAAACAAGCTTTTGTAGGAGG
AAAATGAAAGGTTGCAAAACCCGGGGCCACGCTGGGGTAAGAAAAGGGAA
ACTTTCCCCAAAATACCAAAAAACACACCTTTGGCCCCAAAAATCAAACC
GGGGAATGGTGGGGGGACCGGGGGGCACCCCCTTTTAACCCTCCCATCCT
TCCCGGGGGAGGGCTTACCCGGGGGGGGGTTTTGTTTCCTTTTGGAAAAA
AAAATTTATTAAAAAATTTTTTTTTTTAAAGGGCCCCCCGGGAAAATCGG
CGTTGTGTGAGAGGGGGGGCCTCACAAAAACCCTCCGG
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