DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 4.164e-14 Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*L-DISVKPGTQVIYSKYAG 1012 + + +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ EVVAVG G+ + + L + +K G +V+YSKYAG Sbjct: 4 VTLNVSTLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 7.103e-14 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ EVVAVG G+ +++ VK G +VI+SKYAG +G ++ L+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 7.103e-14 Identity = 41/84 (48.81%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ EVVAVG G+ +++ VK G +VI+SKYAG +G ++ L+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_ANASP (10 kDa chaperonin OS=Anabaena sp. (strain PCC 7120) GN=groS PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.212e-13 Identity = 39/79 (49.37%), Postives = 56/79 (70.89%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++KPLGDRV VK+ EEKT GG++LP TA+ KPQ EVVA+G R +D + ++ VK G +V+YSKYAG Sbjct: 4 VSLSVSTVKPLGDRVFVKVSASEEKTAGGLYLPDTAKEKPQVGEVVALGAGKRNDDGSRQ--ELEVKVGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CYAP8 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 8801) GN=groS PE=3 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.582e-13 Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ E+V VG R +D ++ + VK G +V+YSKYAG G + L E Sbjct: 4 ISINVSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQIGEIVTVGPGKRNDDGSRS--EPEVKVGDKVLYSKYAGTDIKLGGEDYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_NOSP7 (10 kDa chaperonin OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=groS PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.699e-13 Identity = 38/79 (48.10%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++KPL DRV VK+ EEKT GG++LP TA+ KPQ EVVA+G R ED + ++ +K G +V+YSKYAG Sbjct: 4 LSLSVSTVKPLSDRVFVKVNASEEKTAGGLYLPDTAKEKPQVGEVVALGPGKRNEDGSRQ--ELEIKVGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CYAP4 (10 kDa chaperonin OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=groS PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.604e-13 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ E+VAVG R +D + + VK G +V+YSKYAG Sbjct: 4 VSLSVSTVKPLGDRVFVKVSASEEKTAGGILLPDTAKEKPQVGEIVAVGPGKRNDDGSRQ--EPEVKIGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THETN (10 kDa chaperonin OS=Thermoanaerobacter tengcongensis GN=groS PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 6.013e-13 Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ EVVAVG G+ ++ VK G +VI+SKYAG +G ++ L+E Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGDRVIFSKYAGTEVKLDGEEYLLLRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNY3 (10 kDa chaperonin OS=Synechocystis sp. (strain PCC 6803) GN=groS PE=1 SV=3) HSP 1 Score: 75.8702 bits (185), Expect = 6.013e-13 Identity = 42/94 (44.68%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP A+ KPQ EVV VG R +D + + VK G +V+YSKYAG G + L E Sbjct: 4 ISINVSTVKPLGDRVFVKVSPAEEKTAGGILLPDNAKEKPQIGEVVQVGPGKRNDDGTYS--PVEVKVGDKVLYSKYAGTDIKLGGDDYVLLTE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THEVL (10 kDa chaperonin OS=Thermosynechococcus vulcanus GN=groS PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ EV AVG G ED + +D VK G +V+YSKYAG G + L E Sbjct: 4 VSLSVSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMD--VKVGDKVLYSKYAGTEVKLAGEDYVLLSE 95 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |