DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_THEEB (10 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groS PE=3 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ VK+ EE+T GGI LP A+ KPQ EV AVG G ED + +D VK G +V+YSKYAG G + L E Sbjct: 4 VSLSVSTVKPLGDRIFVKVAESEERTAGGILLPDNAREKPQVGEVTAVGPGKLTEDGKRQPMD--VKVGDKVLYSKYAGTEVKLAGEDYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROMT (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL2A) GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EV VG R ED + ++SV G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSV--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM1 (10 kDa chaperonin OS=Prochlorococcus marinus (strain NATL1A) GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EV VG R ED + ++SV G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQSPEVSV--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_NATTJ (10 kDa chaperonin OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 40/83 (48.19%), Postives = 56/83 (67.47%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKH 1042 ++KPLGDR+++KI EEKT+ GI LP A+ KPQ EVVAVG G +D K ++ VK G +V+YSK+AGN +G ++ Sbjct: 2 NLKPLGDRIVIKILEAEEKTESGIVLPEKAKEKPQEGEVVAVGSGKTLDDGSK--VEPEVKAGDKVVYSKFAGNEVEVDGEEY 82
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_EXISA (10 kDa chaperonin OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=groS PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.340e-12 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE--DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +KPLGDRV++++ EEKT GGI LP TA+ KPQ +VVAVG G D K +D+ VK VIYSKYAG +G ++ ++E Sbjct: 2 LKPLGDRVIIEVVEKEEKTIGGIVLPDTAKEKPQQGKVVAVGTGRVTDEGKR-IDLDVKENDLVIYSKYAGTEVKHDGKEYLIVRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_TRIEI (10 kDa chaperonin OS=Trichodesmium erythraeum (strain IMS101) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.749e-12 Identity = 40/94 (42.55%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 + + +++KPLG+RV VK+ EEKT GGI LP +A+ KPQ EVV+ G R +D + ++ VK G +V+YSKYAG G ++ L E Sbjct: 4 VTLSVSTVKPLGERVFVKVSESEEKTAGGILLPDSAKEKPQVGEVVSAGPGKRNDDGTR--AEMEVKVGDKVLYSKYAGTDIKLGGDEYVLLAE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNPW (10 kDa chaperonin OS=Synechococcus sp. (strain WH7803) GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.749e-12 Identity = 42/94 (44.68%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EVV VG G ED + ++ V G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKANEDGSRQAPEVGV--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.749e-12 Identity = 36/84 (42.86%), Postives = 55/84 (65.48%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 IKPL DRV++K + EEKT+ G+++P TA+ KPQ V+AVG G +++SVK G +V+Y KYAG +G ++ ++E Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRE 89
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNS9 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9902) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.285e-12 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EVV VG G ED + ++ + G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKPNEDGSRQAPEVGI--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNPX (10 kDa chaperonin OS=Synechococcus sp. (strain WH8102) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.285e-12 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV +K+ EEKT GGI LP TA+ KPQ EVV VG R +D + ++ V G +V+YSKYAG G + L E Sbjct: 4 VSLSVSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGV--GDKVLYSKYAGTDIKLGGDEFVLLTE 95 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |