DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROMS (10 kDa chaperonin OS=Prochlorococcus marinus (strain AS9601) GN=groS PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.285e-12 Identity = 39/94 (41.49%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G ED + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNEDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNSC (10 kDa chaperonin OS=Synechococcus sp. (strain CC9605) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EVV VG R +D + ++ V G V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGV--GDNVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNS3 (10 kDa chaperonin OS=Synechococcus sp. (strain CC9311) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VKI EEKT GGI LP TA+ KPQ EVV VG G +D + ++ + G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKISESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKSNDDGSRQAPEVGI--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROMM (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9313) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 39/79 (49.37%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EVV VG R +D + ++ V G +V+YSKYAG Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVVQVGPGKRNDDGSRQAPEVGV--GDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM4 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9211) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV VK+ EEKT GGI LP TA+ KPQ EV VG R ED + ++ V G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFVKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNEDGSRQAPEVGV--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOCE (10 kDa chaperonin OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=groS PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.897e-12 Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKEG 1060 IKPLGDRV++K+ EE T GI LP +A+ KPQ +E+VAVG G + + VK G +V+ SKY+G F+G ++ LK+G Sbjct: 3 IKPLGDRVVIKMLESEETTKSGIVLPGSAKEKPQVAEIVAVGPGTVVDGKEVKMEVKVGDRVLTSKYSGTEVKFDGQEYTILKQG 87
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM9 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9312) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.090e-12 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G +D + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM2 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9215) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.090e-12 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G +D + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM0 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9301) GN=groS PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.090e-12 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G +D + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSASEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOTH (10 kDa chaperonin OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=groS PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.090e-12 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +I+PLGDRV+VK+ EE T GI LP +A+ KPQ +EVVAVG G + + VK G +VI SKYAG F+G ++ L++ Sbjct: 2 NIRPLGDRVVVKMVETEETTKSGIVLPGSAKEKPQVAEVVAVGPGTVVDGKEVKMEVKVGDKVIISKYAGTEVKFDGQEYTILRQ 86 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |