DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROMP (10 kDa chaperonin OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.648e-12 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G +D + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROM5 (10 kDa chaperonin OS=Prochlorococcus marinus (strain MIT 9515) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.648e-12 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDR+ +K+ EEKT GGI LP +A+ KPQ EV VG G +D + ++S+ G +V+YSKYAG G ++ L E Sbjct: 4 VSLTVSTVKPLGDRIFIKVSESEEKTAGGILLPDSAKEKPQVGEVAQVGPGKLNDDGSRQTPEVSI--GDKVLYSKYAGTDIKLGGDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOB8 (10 kDa chaperonin OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=groS PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 6.648e-12 Identity = 40/85 (47.06%), Postives = 55/85 (64.71%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +IKPLG+RV++K EEKT GI L TA+ +PQ +EVVAVG G N + + VK G +V+YSKYAG +G ++ LK+ Sbjct: 2 NIKPLGERVVIKKLEAEEKTKSGIVLTGTAKERPQEAEVVAVGPGAVVDGNRVAMEVKVGDKVLYSKYAGTEVKVDGEEYTILKQ 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_DESVM (10 kDa chaperonin OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=groS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 8.682e-12 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*L-DISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++KPL DRVLVK EEKT GG+F+P TA+ KP EVVA G G+ + L ++VK G V++SKYAG +G +H ++E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLFIPDTAKEKPSRGEVVAAGPGKVAEDGKLIAMTVKKGDTVLFSKYAGTEIKLDGVEHLVMRE 87
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PROMA (10 kDa chaperonin OS=Prochlorococcus marinus GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 +++ +++KPLGDRV +K+ EEKT GGI LP TA+ KPQ EV VG R +D + ++ V G +V+YSKYAG ++ L E Sbjct: 4 VSLSVSTVKPLGDRVFIKVSESEEKTAGGILLPDTAKEKPQVGEVAQVGPGKRNDDGSRQAPEVGV--GDKVLYSKYAGTDIKLGSDEYVLLSE 95
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_PELPB (10 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 37/86 (43.02%), Postives = 55/86 (63.95%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWK-N*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++KPL DRV+VK EEKT GG+++P T + KPQ EVVAVG G+ + L++ VK G++V+Y KY+G G + ++E Sbjct: 2 NLKPLSDRVIVKPAAAEEKTKGGLYIPDTGKEKPQYGEVVAVGAGKIADNGQLLEMQVKVGSKVLYGKYSGTEVSVEGEDYLIMRE 87
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LAWIP (10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE--DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++KPL DRVLVK EEKT GG+++P TA+ KP EVVAVG G+ D K + ++VK G V+++KYAG +G +H ++E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKL-IPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMRE 87
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LAWIN (10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE--DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++KPL DRVLVK EEKT GG+++P TA+ KP EVVAVG G+ D K + ++VK G V+++KYAG +G +H ++E Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAVGPGKHTDDGKL-IPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMRE 87
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOBO (10 kDa chaperonin OS=Clostridium botulinum GN=groS PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.134e-11 Identity = 38/84 (45.24%), Postives = 56/84 (66.67%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 IKPLGDRV++K EEKT GI LP +A+ KPQ +E+VAVG G +++ VK G +V++S+YAGN +G ++ L++ Sbjct: 3 IKPLGDRVVIKRLEAEEKTKSGIVLPGSAKEKPQEAEIVAVGPGGLVDGKEVNMEVKVGDRVLFSQYAGNEVKIDGEEYIILRQ 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_RUBXD (10 kDa chaperonin OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 2 Query: 809 KPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNG 1033 KPLG+R LVK+ EEKT GI LP TA+ KPQ +EV+AVG E DI VK G V+++KY+G NG Sbjct: 4 KPLGERALVKLVEREEKTASGIVLPDTAKEKPQTAEVIAVGDSE-------DIKVKEGDVVVFAKYSGTEISLNG 71 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |