DY263224
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOPS (10 kDa chaperonin OS=Clostridium perfringens (strain SM101 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 SIKPLGDRV++K EE T GI + TA+ +PQ +EVVAVG G ++ VK G +V+YSKYAG F G ++ L++ Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIIDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQ 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOPE (10 kDa chaperonin OS=Clostridium perfringens GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 SIKPLGDRV++K EE T GI + TA+ +PQ +EVVAVG G ++ VK G +V+YSKYAG F G ++ L++ Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQ 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_CLOP1 (10 kDa chaperonin OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 39/85 (45.88%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 803 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGEDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 SIKPLGDRV++K EE T GI + TA+ +PQ +EVVAVG G ++ VK G +V+YSKYAG F G ++ L++ Sbjct: 2 SIKPLGDRVVIKRLEAEETTKSGIIVTGTAKERPQEAEVVAVGPGAIVDGKRTEMEVKIGDKVLYSKYAGTEVKFEGEEYTILRQ 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_BACTR (10 kDa chaperonin OS=Bacillus thermoglucosidasius GN=groS PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.481e-11 Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE--DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 IKPLGDRV+++I EEKT GI LP TA+ KPQ +VVAVG+G D+ + + V+ G ++I+SKYAG ++G ++ L+E Sbjct: 2 IKPLGDRVVIEIVETEEKTASGIVLPDTAKEKPQEGKVVAVGKGRVLDNGQR-VAPEVEVGDRIIFSKYAGTEVKYDGKEYLILRE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LACRJ (10 kDa chaperonin OS=Lactobacillus reuteri (strain JCM 1112) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.934e-11 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPK 1039 +KPLGDRV++K +T EEKT GGI L S + KP +V+AVG G E+ K L +VK G +V++ KYAGN +NG K Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQK--LAPAVKEGDRVLFDKYAGNEVEYNGEK 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LACRD (10 kDa chaperonin OS=Lactobacillus reuteri (strain DSM 20016) GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.934e-11 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRG---EDSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPK 1039 +KPLGDRV++K +T EEKT GGI L S + KP +V+AVG G E+ K L +VK G +V++ KYAGN +NG K Sbjct: 2 LKPLGDRVVLKAETEEEKTVGGIVLASNVKEKPTTGKVIAVGEGRTLENGQK--LAPAVKEGDRVLFDKYAGNEVEYNGEK 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LACAC (10 kDa chaperonin OS=Lactobacillus acidophilus GN=groS PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.934e-11 Identity = 41/85 (48.24%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE-DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++P+GDRV+VK+K EEKT GGI L S A+ KP EVVAVG G S + L + VK G V+Y KY+G + G K+ L E Sbjct: 2 LQPIGDRVIVKVKEEEEKTVGGIVLASNAKQKPTEGEVVAVGEGAYTSNGDKLPMVVKKGDVVLYDKYSGTNVEYEGEKYLVLHE 86
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNP6 (10 kDa chaperonin OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.526e-11 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++ PLGDRV VK+ EEKT GGI LP A+ KPQ E+VAVG R +D + VK G +V+YSKYAG Sbjct: 4 VSLSVSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQ--APEVKIGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_SYNE7 (10 kDa chaperonin OS=Synechococcus elongatus (strain PCC 7942) GN=groS PE=3 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.526e-11 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 785 MAVQYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVG---RGEDSWKN*LDISVKPGTQVIYSKYAG 1012 +++ +++ PLGDRV VK+ EEKT GGI LP A+ KPQ E+VAVG R +D + VK G +V+YSKYAG Sbjct: 4 VSLSVSTVTPLGDRVFVKVAEAEEKTAGGIILPDNAKEKPQVGEIVAVGPGKRNDDGSRQ--APEVKIGDKVLYSKYAG 80
BLAST of DY263224 vs. ExPASy Swiss-Prot
Match: CH10_LACHE (10 kDa chaperonin OS=Lactobacillus helveticus GN=groS PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 2.526e-11 Identity = 40/85 (47.06%), Postives = 53/85 (62.35%), Query Frame = 2 Query: 806 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQASEVVAVGRGE-DSWKN*LDISVKPGTQVIYSKYAGN*FGFNGPKHPKLKE 1057 ++P+GDRV+VK+K EEKT GGI L S A+ KP EVVAVG G S + +SVK G V+Y +Y+G + G K+ L E Sbjct: 2 LQPIGDRVIVKVKDEEEKTVGGIVLASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKGDVVLYDRYSGTNVEYEGEKYLVLHE 86 The following BLAST results are available for this feature:
BLAST of DY263224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263224 ID=DY263224; Name=DY263224; organism=Citrus clementina; type=EST; length=1301bpback to top |