DY263235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP23_ORYSJ (Expansin-A23 OS=Oryza sativa subsp. japonica GN=EXPA23.1 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.047e-28 Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 9 AALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 AALSTALFN+G CG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+R Sbjct: 75 AALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWNLPSDNGGWCNPPRPHFDMAQPAWEKIGVYSAGIIPVIYQR 164
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.367e-28 Identity = 57/91 (62.64%), Postives = 68/91 (74.73%), Query Frame = 3 Query: 9 AALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 AALSTALFN+G CG C+++ C PQWC PG + ITATNFCPPN+ PSDNGGWCNPPRPHFD+A P + K+ Y AGI+PV Y+R Sbjct: 70 AALSTALFNDGASCGQCYKIACDRKRAPQWCKPG-VTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQR 159
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.786e-28 Identity = 55/90 (61.11%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 T A+ST LF G CGAC+E+KC P C G +++TATN CPPN Q +DNGGWCNPPR HFDL+MP FL++AQ +AGIVP+SYRR Sbjct: 77 TVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQEKAGIVPISYRR 166
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 5.196e-28 Identity = 58/91 (63.74%), Postives = 67/91 (73.63%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGG-DPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TAALSTALFN G CGACF + C QWC PG +I +TATNFCPPN+A D GGWCNPPR HFD++ P + +A YRAGIVPV+YRR Sbjct: 60 TAALSTALFNGGASCGACFTIACDTRKTQWCKPGT-SITVTATNFCPPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRR 149
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 6.786e-28 Identity = 53/90 (58.89%), Postives = 70/90 (77.78%), Query Frame = 3 Query: 9 AALSTALFNNGLICGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 AALS+ALFN+G +CGAC+ + C +WC PG +I ITATN CPPN+A PS++GGWCNPPR HFD++ P + +A Y+AGIVPV+Y+R Sbjct: 64 AALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKR 153
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP25_ORYSJ (Expansin-A25 OS=Oryza sativa subsp. japonica GN=EXPA25 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.368e-27 Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 NTAALS+ LFN+G CG C+ + C PQWC G A+ ITATN CPPN+A PS++GGWCNPPRPHFD+A P +L++ Y+AGI+PV Y++ Sbjct: 61 NTAALSSVLFNDGWSCGQCYLIMCDAAATPQWCRAG-AAVTITATNLCPPNWALPSNSGGWCNPPRPHFDMAEPAWLQIGIYKAGIIPVLYQQ 152
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 9.799e-27 Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 N AALS+ALFN+G +CGAC+ + C WC PG +I ITATN CPPN+A+ SD GGWCNPPR HFD++ P + +A Y+AGIVPV+++R Sbjct: 57 NNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGT-SITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKR 147
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.672e-26 Identity = 54/92 (58.70%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TAALSTALFN+G CG C+ + C D +WC G +++ITATNFCPPNFA P++NGGWCNPP HFD+A P + K+ YR GIVPV ++R Sbjct: 61 TAALSTALFNDGASCGECYRITCDHAADSRWCLKG-ASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQR 151
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.851e-26 Identity = 54/93 (58.06%), Postives = 69/93 (74.19%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGG--WCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 +TAALST LF +G CG C++++C G C G+PAI +TATN CPPN+A+ D GG WCNPPR HFDL+ P F+++A +RAGIVPV YRR Sbjct: 71 DTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRR 162
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP21_ORYSJ (Expansin-A21 OS=Oryza sativa subsp. japonica GN=EXPA21 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 2.851e-26 Identity = 55/97 (56.70%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGG----DPQWCNP--GNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 +TAALS +F +GL CGACFEL+CGG D + C P +I++TAT+ CP N A P D GGWCNPP HFDL+ P FL++A++++GIVPVSYRR Sbjct: 64 DTAALSAVMFGDGLSCGACFELRCGGGGGGDRRGCLPPAAGKSIVVTATDLCPANHALPGDRGGWCNPPLHHFDLSQPAFLRIARFQSGIVPVSYRR 160 The following BLAST results are available for this feature:
BLAST of DY263235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263235 ID=DY263235; Name=DY263235; organism=Citrus clementina; type=EST; length=1325bpback to top |