DY263235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.724e-26 Identity = 54/91 (59.34%), Postives = 67/91 (73.63%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 +TAALST LFN+G CG CF++ C P C G + +TATN CPPN+ Q S+ GGWCNPPR HFD+A P F+KLA +RAGI+PV+YRR Sbjct: 71 STAALSTTLFNDGYGCGQCFQITCSKSPH-CYSGKSTV-VTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLAYWRAGIIPVAYRR 159
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 3.724e-26 Identity = 53/93 (56.99%), Postives = 67/93 (72.04%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 + AALS ALFN+G CG C+ + C PQWC G A+ +TATN CPPN+A PSD GGWCNPPRPHFD++ P + ++ Y+AGIVPV Y+R Sbjct: 62 DNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGT-AVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQR 153
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 3.724e-26 Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 3 Query: 9 AALSTALFNNGLICGACFELKCGGDP--QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 AALSTALFN+G CG C+ + C D +WC P A+ +TATN CPPN+A PSD GGWCNPPR HFD++ P + ++ YRAGIVPV YRR Sbjct: 63 AALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRG-AVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRR 152
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 6.352e-26 Identity = 52/93 (55.91%), Postives = 69/93 (74.19%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 NTAALS+ALFN+G CG C+++ C +P+WC G + IT TN CPPN+A S++GGWCNPPR HFD+A P +L++ Y+AGIVPV Y+R Sbjct: 66 NTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGR-TVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQR 157
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 1.083e-25 Identity = 49/92 (53.26%), Postives = 71/92 (77.17%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCG-GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 NTAALS+ALFN+G CG C+++ C + +WC G ++ ITATN CPP++++PS++GGWCNPPR HFD+A P + ++ YR GIVPV+++R Sbjct: 58 NTAALSSALFNDGAACGECYQITCDQSNSKWCKAGT-SVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQR 148
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 3.152e-25 Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 3 Query: 9 AALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 AALSTALFN G CG C+ + C P+WC G A+ ITATN CPPN+A +D+GGWCNPPRPHFD++ P + + YRAGIVPV Y++ Sbjct: 63 AALSTALFNGGASCGQCYLIMCDASKTPEWCKAGT-AVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQ 152
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 5.377e-25 Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 NTAALST LFN+G CG C+ + C D ++C G ++ ITATN CPPN+A P+D GGWCNPPR HFD+A P +LK+ Y GIVPV Y+R Sbjct: 68 NTAALSTVLFNDGASCGQCYRIMCDYQADRRFCISGT-SVTITATNLCPPNYALPNDAGGWCNPPRQHFDMAEPAWLKIGVYVGGIVPVMYQR 159
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 9.172e-25 Identity = 54/90 (60.00%), Postives = 66/90 (73.33%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TAALSTALF+ GL CGACFEL C DPQWC G +I++TATNFCPP GG C+PP HFDL+ P++ K+A Y++GI+PV YRR Sbjct: 73 TAALSTALFDQGLSCGACFELMCVNDPQWCIKGR-SIVVTATNFCPP--------GGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRR 153
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.121e-22 Identity = 46/92 (50.00%), Postives = 64/92 (69.57%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGDP-QWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 NT ALS+AL+ +G CGAC+ + C +WC G ++ +TATN+CPPN+++ D GGWCNPPR HFD++ P + +A Y +GIVPV Y R Sbjct: 61 NTTALSSALYGDGASCGACYLVTCDASATRWCKNGT-SVTVTATNYCPPNYSESGDAGGWCNPPRRHFDMSQPAWEAIAVYSSGIVPVRYAR 151
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 1.121e-22 Identity = 48/90 (53.33%), Postives = 63/90 (70.00%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 T LSTALF G CG C+E+KC D ++C PG +I++TATNFC PNF P+D GG CNPP HF L + F K+A ++AG++P+ YRR Sbjct: 67 TVGLSTALFERGAACGGCYEVKCVDDLKYCLPGT-SIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRR 155 The following BLAST results are available for this feature:
BLAST of DY263235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263235 ID=DY263235; Name=DY263235; organism=Citrus clementina; type=EST; length=1325bpback to top |