DY263235
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 4.261e-22 Identity = 49/90 (54.44%), Postives = 60/90 (66.67%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 T LS LF G ICGACFEL+C D +WC PG +I++TATNFC PN+ D GG CNPP HF L + F K+A ++AG +PV YRR Sbjct: 75 TVGLSETLFERGQICGACFELRCVDDLRWCIPGT-SIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRR 163
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.114e-21 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 +A LS LFN G CGAC E++C +WC G+P++++TAT+FCPPN SD GGWCN P+ H +L+ F +A+ RA ++P+ YRR Sbjct: 65 SAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRR 154
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 6.152e-21 Identity = 42/90 (46.67%), Postives = 60/90 (66.67%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TA +S ALF G CG C+E++C WC G+P +++TAT+FC PN D GGWCN P+ HF+++ FL++A+ +A IVPV +RR Sbjct: 69 TAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRR 158
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 1.371e-20 Identity = 50/90 (55.56%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TAALSTALFN+G CGAC+E+ C +PQ C G +I ITAT+ CPP A WC P HFDL++PMF+K+AQ +A +VPV YRR Sbjct: 81 TAALSTALFNSGASCGACYEIMCSPNPQGCLSG--SIKITATDLCPPGSA-------WCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRR 161
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP18_ORYSJ (Expansin-A18 OS=Oryza sativa subsp. japonica GN=EXPA18 PE=2 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 6.802e-20 Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 N AALST LFNNG CG C+ + C D P C G AI +T TNFCPPN+ P GGWCN RPHFD++ P + + Y AGIVP+ Y++ Sbjct: 57 NNAALSTPLFNNGASCGQCYLIICNYDKAPSGCRMGT-AITVTGTNFCPPNYDLPY--GGWCNTTRPHFDMSQPAWENIGIYSAGIVPILYQQ 146
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.515e-19 Identity = 45/93 (48.39%), Postives = 59/93 (63.44%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCGGD--PQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 N AALST LFN+G CG C+ + C P WC G AI +T TN+CPPN+ P GGWCN RPHFD++ P + + Y AGI+P+ Y++ Sbjct: 57 NNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGK-AITVTGTNYCPPNYDLPY--GGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQ 146
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.283e-18 Identity = 47/94 (50.00%), Postives = 62/94 (65.96%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKCG--GDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQY-RAGIVPVSYRR 275 +TAALS LF +G CG C++++C DP+WC G A+ +TATNFCP N +N GWCN PR HFD++ P F ++A+ GIVPV YRR Sbjct: 61 HTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRG-AAVTVTATNFCPTN-----NNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRR 148
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.124e-14 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 3 Query: 3 NTAALSTALFNNGLICGACFELKC--GGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 N AALST LFN+G CG C+ + C G P WC G AI +T TN+ GGWCN RP+FD++ P + + Y AGIVP+ Y++ Sbjct: 57 NNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGK-AITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQ 137
BLAST of DY263235 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 4.419e-11 Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 3 Query: 6 TAALSTALFNNGLICGACFELKCGGDPQWCNPGNPAILITATNFCPPNFAQPSDNGGWCNPPRPHFDLAMPMFLKLAQYRAGIVPVSYRR 275 TAA+S ALF+NG CGAC+ELK GD +++TATN PP NG HFDL MP FL +A+ + G+VPVSYR+ Sbjct: 116 TAAVSPALFDNGAGCGACYELK--GD------SGKTVVVTATNQAPPPV-----NG----MKGEHFDLTMPAFLSIAEEKLGVVPVSYRK 188 The following BLAST results are available for this feature:
BLAST of DY263235 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263235 ID=DY263235; Name=DY263235; organism=Citrus clementina; type=EST; length=1325bpback to top |