DY263240
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: GGPP6_ARATH (Geranylgeranyl pyrophosphate synthetase 6, mitochondrial OS=Arabidopsis thaliana GN=GGPP6 PE=2 SV=2) HSP 1 Score: 181.03 bits (458), Expect = 9.105e-45 Identity = 104/253 (41.11%), Postives = 150/253 (59.29%), Query Frame = 3 Query: 267 QIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP----------NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHS-------TGVEKAMEVAEELRSKAKEEL 974 +++++MRY++L G KR P++C+ ACEL G A P ACA+EM+HAASLI DDLPCMDDD RRG+P+NH V+G +ILA +AL L + ++ T + E RVLR + E+ARAVG+ G+ AGQ DL GE +E + K + E +AV G + G D+EI+ L+ Y R VG+++QV+DD+L+ +T EE K G+ + GV+ A E A+ L +A+E L Sbjct: 66 EVHKAMRYTLLPGG-KRVRPMLCLVACELVGGQESTAMPAACAVEMIHAASLILDDLPCMDDDSLRRGKPTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSE-RVLRAVQEMARAVGTEGLVAGQAADLAGERMSFKNEDDELRYLELMHVHKTAVLVEAAAVVGAIMGGGSDEEIERLKSYARCVGLMFQVMDDVLD---ETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRLNREAQEHL 313
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_BACSU (Geranyltranstransferase OS=Bacillus subtilis GN=ispA PE=3 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 3.468e-36 Identity = 87/239 (36.40%), Postives = 134/239 (56.07%), Query Frame = 3 Query: 204 TTLITEIDQNLEKAITV-----KYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRR 890 T+ + + + +E ++V P+ + +SM YS+ A G KR P++ +A +G + P CA+EM+H SLIHDDLPCMDDD RRG+P+NH V+G A+LAGD L F+ I SH + E R LR++ E+ A G+ GM GQ D+E E V E + E+K ++ + G LA A +++I++LR + +G+ +Q+ DDIL+ + EEK +R Sbjct: 6 TSFLADRKKTIENQLSVYTEKLDMPDSLKKSMLYSLQAGG-KRLRPLIVLAVLNAYGKSEKDGIPVGCAVEMIHTYSLIHDDLPCMDDDDLRRGKPTNHKVFGEATAVLAGDGLLTESFKLITSHVSDEVSAEKR-LRLVNELISAAGTEGMVGGQVADMEAENRQVTLEELESIHERKTAKLLGFCVIAGAILADAPEEDIETLRTFSSHIGIGFQIRDDILDLEG----SEEKIGKR 238
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_BACST (Geranyltranstransferase OS=Bacillus stearothermophilus PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 7.231e-34 Identity = 83/221 (37.56%), Postives = 125/221 (56.56%), Query Frame = 3 Query: 213 ITEIDQNLEKAIT-----VKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNL-----VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILE 845 + E Q +E A++ ++ P ++ ++M YS+ A G KR P++ ++ G + P ACA+EM+H SLIHDDLP MD+D RRG+P+NH V+G +AILAGD L FQ I + P R LR+I +A+A G GM AGQ D+EGE +E++ K G+M + S G + GAD + + L + +G+ +Q+ DDIL+ Sbjct: 10 LNEQKQAVETALSRYIERLEGPAKLKKAMAYSLEAGG-KRIRPLLLLSTVRALGKDPAVGLPVACAIEMIHTYSLIHDDLPSMDNDDLRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVR-LRLIERLAKAAGPEGMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAAHLGLAFQIRDDILD 228
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_AQUAE (Geranyltranstransferase OS=Aquifex aeolicus GN=ispA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.508e-31 Identity = 83/245 (33.88%), Postives = 132/245 (53.88%), Query Frame = 3 Query: 219 EIDQNLEKAITVKYPEQIYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHSTGVEKAMEVAEELR 953 +I++ L + + + PE++ E+M+Y L KG KR P+ VA G N A +E++H SLIHDDLPCMD+D RRG P+ H +G +A+LAGDAL F+ + + +L + IA+ GS GM GQ LD++G +L E V KK G + E +CG +A ++++ + GR VG+L+Q+VDD L+ + E K + ++ ++ + ++ELR Sbjct: 10 KIEKRLNEILKPEGPEELIEAMKYYPLQKG-KRIRPLFTVAVASALGGNEDDAITVGSGIELIHNYSLIHDDLPCMDNDVWRRGLPTCHIKFGEAMALLAGDALLTYTFEVLSQRENYKTLSCEEILEINKIIAQKAGSNGMVGGQVLDIKGYEDLYE-VSVKKTGALFEACFMCGAVVA-KRREKLKEMESIGRKVGLLFQMVDDYLDKDGFYEKLGECLKEEIKKLYEELKEKEIFKESQELR 251
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_ECOLI (Geranyltranstransferase OS=Escherichia coli (strain K12) GN=ispA PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 2.253e-27 Identity = 87/249 (34.94%), Postives = 127/249 (51.00%), Query Frame = 3 Query: 270 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDE-IQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHST-----GVEKAMEVAEELRSKAKEELDRV 983 + E+M+Y L G KR P + A +FGV+ A A+E +HA SLIHDDLP MDDD RRG P+ H +G AILAGDAL L F + P + R+ +I+E+A A G GM GQ LDL+ E + +E + K G + + G AG + L +Y ++G+ +QV DDIL+ T KR+ + + ST G+E+A + A +L A++ L ++ Sbjct: 32 VVETMQYGALLGG-KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRI-SMISELASASGIAGMCGGQALDLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLAFQVQDDILDVVGDT-ATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQL 277
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_MICLU (Geranyltranstransferase OS=Micrococcus luteus GN=fps PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.943e-27 Identity = 79/212 (37.26%), Postives = 118/212 (55.66%), Query Frame = 3 Query: 237 EKAITVKYPEQ--IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP-----NLVEFVQEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAK 851 E + +P Q ++E++ YS L+ G KR P++ + + G N P ALEM+H SLIHDDLP MD+D RRG+ +NH + AILAGDAL FQ I++ L E + L +I ++ A GS GM GQ LD++GE N +E + K GE+ + V G + +D +I+ L G+ VG+++Q+ DDIL+ + Sbjct: 18 ESLLNKYHPAQSRLHEAINYS-LSAGGKRIRPLLVLTTLDSLGGNAHDGLPFGIALEMIHTYSLIHDDLPAMDNDDYRRGKLTNHKRFDEATAILAGDALLTDAFQCILN---TQLNAEIK-LSLINLLSTASGSNGMVYGQMLDMQGEHKTLTLNELERIHIHKTGELIRAAIVSAGIIMNFNDAQIEQLNIIGKNVGLMFQIKDDILDVE 224
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAP (Geranyltranstransferase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=ispA PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 5.019e-27 Identity = 86/245 (35.10%), Postives = 133/245 (54.29%), Query Frame = 3 Query: 270 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAGADDDEIQ-SLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHSTGVEKAMEVAEELRSKAKEELDRVK 986 ++ +M+YS L+ G KR + A E F VN A + A+E+VH+ SLIHDDLPC+D+D RRG+ S H YG + A+LAGDAL L F +I+S++ V + L++IAE + A+G +GM GQ LDLE E + E + K + CS F + E+ L ++ ++G+ +Q+ DDIL+ K + E KR + G++K+ +EL +A L+ +K Sbjct: 32 LFRAMKYSTLSGG-KRLRACLIYATGETFQVNIAALDVISAAVELVHSYSLIHDDLPCIDNDYFRRGKISCHIKYGENFALLAGDALQGLAF-NILSNSNMPGVHDSIRLKMIAEFSNAIGYSGMCIGQMLDLEKERKKINISELEKINLYKTAFLIRCSIRLAYFASNNFSKEVLFILDKFSVSIGLAFQIQDDILDLKNDIKKLESKRNKTKNTYPLLIGLKKSKIKIKELYKEAFFTLEILK 274
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_HAEIN (Geranyltranstransferase OS=Haemophilus influenzae GN=ispA PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 5.194e-24 Identity = 85/251 (33.86%), Postives = 129/251 (51.39%), Query Frame = 3 Query: 270 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEPNLV-----EFVQEKKFGEMSECSAVCGGFLAG---ADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHST-----GVEKAMEVAEELRSKAKEELDRV 983 + E+M+Y++L G KR P + A ++ G + A A+E +HA SLIHDDLP MDDD RRG P+ H + AILAGDAL F+ I++ TP + + L +I +A+ G GM GQ LDL E + E + K G + +A+ GF+ D QSL +Y A+G+ +QV DDIL+ + + + K+ + ST G+ A + A++L A EL+++ Sbjct: 33 LLEAMKYALLLGG-KRVRPFLVYATGQMLGAEKQTLDYAAAAIEAIHAYSLIHDDLPAMDDDNLRRGHPTCHIQFDEATAILAGDALQSFAFE-ILTKTPN--ISTEQKLALIQILAQGAGVQGMCLGQSLDLISEHKQISLSELELIHRNKTGALL-IAALKLGFICSPHFTDKRLEQSLTQYAEAIGLAFQVQDDILDIEGDS-AEIGKQVGADLDLDKSTYPKLLGLSGAKQKAQDLYQSALSELEKI 277
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: ISPA_BUCAI (Geranyltranstransferase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=ispA PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.974e-23 Identity = 77/245 (31.43%), Postives = 136/245 (55.51%), Query Frame = 3 Query: 270 IYESMRYSVLAKGTKRAPPVMCVAACELFGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDLEGEP---NL--VEFVQEKKFGEMSECSAVCGGFLAGADDDEIQS-LRRYGRAVGVLYQVVDDILEAKAQTPRDEEKRKRRGRAMWHSTGVEKAMEVAEELRSKAKEELDRVK 986 + ++M+YSV + G+KR + + ++F VN + A+E +H+ SLIHDDLPCMD+D RRG+ S H YG ++LAGDAL L F +I+S++ V + +++I+E++ ++GS+GM GQ LDLE E NL +E + K + + F + I S L + ++G+ +Q+ DDIL+ K + + + K+ + G++++ + ++L K+ L+ +K Sbjct: 32 LLKAMKYSVFS-GSKRLRSSLIYSTGDVFKVNITTLDVISTAIEFIHSYSLIHDDLPCMDNDNFRRGKISCHVKYGESTSLLAGDALQSLAF-NILSNSFMPNVSNLKRIKMISELSYSIGSSGMCMGQNLDLEAEKKDVNLSELEIINLYKTSFLMRSAVRLVYFSSNNFSKSILSILDLFSISIGLAFQIQDDILDFKKDSVKTDNKKIIKKHTYPLIIGLDESRKKIKQLHKKSFLALNSLK 274
BLAST of DY263240 vs. ExPASy Swiss-Prot
Match: CRTE_PANAN (Geranylgeranyl pyrophosphate synthetase OS=Pantoea ananas GN=crtE PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 5.743e-23 Identity = 76/230 (33.04%), Postives = 118/230 (51.30%), Query Frame = 3 Query: 210 LITEIDQNLEKAITVKYPEQIY-ESMRYSVLAKGTKRAPPVMCVAACEL-FGVNRIAAFPTACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVYGVDIAILAGDALFPLGFQHIVSHTPPHLVPEPRVLRVIAEIARAVGSTGMAAGQFLDL-EGE-PNLVEFV---QEKKFGEMSECSAVCGGFLAGADDDEIQSLRRYGRAVGVLYQVVDDILEAKAQTPRDEEK 878 L+ +ID+ L++ + V+ + +MR LA G + P ++ + A +L V+ ACA+EMVHAASLI DD+PCMDD RRG+P+ H+ YG +AILA AL F I L P + R ++E++ A+G G+ GQF DL EG+ P E + K + S +A A + L R+ +G +Q++DD+ + T +D + Sbjct: 19 LLADIDRRLDQLLPVEGERDVVGAAMREGALAPGKRIRPMLLLLTARDLGCAVSHDGLLDLACAVEMVHAASLILDDMPCMDDAKLRRGRPTIHSHYGEHVAILAAVALLSKAFGVIAD--ADGLTPLAK-NRAVSELSNAIGMQGLVQGQFKDLSEGDKPRSAEAILMTNHFKTSTLFCASMQMASIVANASSEARDCLHRFSLDLGQAFQLLDDLTDGMTDTGKDSNQ 245 The following BLAST results are available for this feature:
BLAST of DY263240 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY263240 ID=DY263240; Name=DY263240; organism=Citrus clementina; type=EST; length=990bpback to top |