DY263359
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP260_ARATH (Pentatricopeptide repeat-containing protein At3g28660 OS=Arabidopsis thaliana GN=PCMP-E80 PE=2 SV=1) HSP 1 Score: 49.6766 bits (117), Expect = 6.502e-13 Identity = 28/90 (31.11%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 289 DQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLE-NNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAG 555 +++ I + TF+ LI AC++ G+ IH + NG+ ++G ++T ++++Y DA KVFDE V W+ L+ G V G Sbjct: 108 EEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCG 197 HSP 2 Score: 46.2098 bits (108), Expect = 6.502e-13 Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 530 CLEVLSLPGKRGLKTHALLIKNGFVDYSI-LRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE-GIYPN 808 C +V +L +G H + K +++ + + T+L+DMY KCG I+ A VF++ R++ W ++I G+A +A C + RE GI P+ Sbjct: 228 CAQVGALA--QGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPD 320
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP203_ARATH (Pentatricopeptide repeat-containing protein At2g46050, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E39 PE=2 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 8.408e-13 Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 2 Query: 557 KRGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 ++G + HA+L K + + T+L++MY K + AR F+ R++V W +MI GFA N EA+ M+ E + P+ Sbjct: 258 EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPD 341 HSP 2 Score: 46.9802 bits (110), Expect = 8.408e-13 Identity = 25/85 (29.41%), Postives = 42/85 (49.41%), Query Frame = 1 Query: 301 IPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAG 555 + ++ +F LI C + ++ G +H + GLE++ F T LV Y CG +A +VF+ + WNAL+ V+ G Sbjct: 138 VSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNG 222
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP259_ARATH (Putative pentatricopeptide repeat-containing protein At3g28640 OS=Arabidopsis thaliana GN=PCMP-E79 PE=3 SV=1) HSP 1 Score: 48.1358 bits (113), Expect = 8.444e-13 Identity = 30/95 (31.58%), Postives = 52/95 (54.74%), Query Frame = 2 Query: 530 CLEVLSLPGKRGLKTHALLIKNGFVDYSI-LRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIRE-GIYPN 808 C +V +L +G H + K +++ + + T+L+DMY KCG I+ A VF + R++ W ++I G+A +A+ C + RE GI P+ Sbjct: 228 CAQVGALA--QGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPD 320 HSP 2 Score: 47.3654 bits (111), Expect = 8.444e-13 Identity = 27/90 (30.00%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 289 DQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLE-NNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAG 555 +++ I + TF+ LI AC++ G+ IH + NG+ ++ ++T ++++Y DA KVFDE V W+ L+ G V G Sbjct: 108 EEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCG 197
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP370_ARATH (Putative pentatricopeptide repeat-containing protein At5g08490 OS=Arabidopsis thaliana GN=PCMP-E32 PE=3 SV=1) HSP 1 Score: 49.2914 bits (116), Expect = 9.332e-13 Identity = 28/83 (33.73%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 563 GLKTHALLIKNGFVDYSILRTSLIDMYFKCGKI-KLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 G H+ +IK G +++ +L+ MY K G I A FD D+D+V W ++IAGF+ N + +A M++E PN Sbjct: 141 GKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPN 223 HSP 2 Score: 36.965 bits (84), Expect = 9.332e-13 Identity = 20/85 (23.53%), Postives = 35/85 (41.18%), Query Frame = 1 Query: 298 GIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIA 552 G + F ++ AC L GR +H + G + ++ MY C +D +K+F + S WN +L G ++ Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVS 100 HSP 3 Score: 28.4906 bits (62), Expect = 9.332e-13 Identity = 12/34 (35.29%), Postives = 21/34 (61.76%), Query Frame = 1 Query: 853 ARRLGQEVHAYVLKNERYSEELFVRSSLVDMYCK 954 A R G+++H+YV++ +FV +SLV Y + Sbjct: 242 ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLR 275
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.039e-12 Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 2 Query: 530 CLEVLSLPGKRGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 C+E+ SL K G + H +K G ++ LIDMY KCG + ARR+FD D+RD+V W ++I G+A + EAL + M GI PN Sbjct: 483 CVEISSL--KLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPN 573
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP111_ARATH (Putative pentatricopeptide repeat-containing protein At1g69350, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 1.407e-12 Identity = 26/74 (35.14%), Postives = 39/74 (52.70%), Query Frame = 2 Query: 563 GLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWM 784 G + H +I+ D ++ SLIDMY K G + A VF++ R +V W SM+ GF+ N EA+ +M Sbjct: 424 GKQIHGHVIRTDVSD-EFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYM 496 HSP 2 Score: 45.8246 bits (107), Expect = 1.407e-12 Identity = 32/113 (28.32%), Postives = 52/113 (46.02%), Query Frame = 1 Query: 229 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENN-GFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALL-----RGAVI 549 I + R ++AL M + GI N+ T +++++C + EG+ +H L+ N L LV++Y CG D E V S ++ WN+L+ RG VI Sbjct: 275 ISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVI 387 HSP 3 Score: 46.9802 bits (110), Expect = 8.750e-12 Identity = 29/95 (30.53%), Postives = 48/95 (50.53%), Query Frame = 1 Query: 322 FNALITACVRTRS-LVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALL-----RGAVIAGKKRFEDTCVVD 588 F +++ AC +R L G +H I G++++ + T L+ MY G+ DAEKVFD + W+ L+ G V+ + F+ C+VD Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFK--CMVD 195 HSP 4 Score: 45.0542 bits (105), Expect = 8.750e-12 Identity = 24/78 (30.77%), Postives = 39/78 (50.00%), Query Frame = 2 Query: 575 HALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 H + + F L SL+ MY KCG + + R+F++ ++ V W +MI+ + +AL MI+ GI PN Sbjct: 225 HGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP184_ARATH (Pentatricopeptide repeat-containing protein At2g34400 OS=Arabidopsis thaliana GN=PCMP-E23 PE=2 SV=2) HSP 1 Score: 49.6766 bits (117), Expect = 1.416e-12 Identity = 25/102 (24.51%), Postives = 49/102 (48.04%), Query Frame = 1 Query: 229 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALL 534 I ++ K+A+ + M+++G + T +++ AC L GRL+ + + FL +KL+ MY CG + A +VF++ + W A++ Sbjct: 205 ISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMI 306 HSP 2 Score: 45.0542 bits (105), Expect = 1.416e-12 Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 2 Query: 530 CLEVLSLPGKRGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEAL 766 C V +L + ++THA + Y + T L+DMY KCG+++ A RVF+ ++ W +MI +AH EAL Sbjct: 344 CGSVGALELGKQIETHASELSLQHNIY--VATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEAL 420
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP355_ARATH (Pentatricopeptide repeat-containing protein At4g38010 OS=Arabidopsis thaliana GN=PCMP-E45 PE=2 SV=1) HSP 1 Score: 50.0618 bits (118), Expect = 1.844e-12 Identity = 45/165 (27.27%), Postives = 62/165 (37.58%), Query Frame = 2 Query: 563 GLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWM-IREGIYPNXXXXXXXXXXXXXXXXXD*DKRFMLMC*KMRDIQRSCLFGLAWLICIVSVEI*ILLWRVFNETEERNEILWTALKSGLGPKG 1054 G H L++K + +LIDMY KC ++ A RVF E + +D V W SMI+G H EA+D M GI P+ D R++ I+ G A + +FN +N W AL GL G Sbjct: 223 GKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVD-HGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHG 386 HSP 2 Score: 44.2838 bits (103), Expect = 1.844e-12 Identity = 24/86 (27.91%), Postives = 39/86 (45.35%), Query Frame = 1 Query: 298 GIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAG 555 G ++ TF + AC + + EG+ IH + G ++ +++ LV Y CG +A KVF E V W ++ G G Sbjct: 101 GFSPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTG 186
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PPR62_ARATH (Pentatricopeptide repeat-containing protein At1g28690, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2 SV=2) HSP 1 Score: 62.003 bits (149), Expect = 1.848e-12 Identity = 33/82 (40.24%), Postives = 48/82 (58.54%), Query Frame = 2 Query: 563 GLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 G + HA ++K+G + + +SL+DMY KCG I ARRVFD+ ++++ W SMI G+ N EAL+ M I PN Sbjct: 292 GQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPN 373 HSP 2 Score: 32.3426 bits (72), Expect = 1.848e-12 Identity = 18/77 (23.38%), Postives = 39/77 (50.65%), Query Frame = 1 Query: 328 ALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRGAVIAGK 558 AL+ V++ L R + ++ + N T ++ Y + G EDAE++F+ + + + +NA++ G +G+ Sbjct: 180 ALVDTYVKSGKLESARTVFETMK----DENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGE 252
BLAST of DY263359 vs. ExPASy Swiss-Prot
Match: PP121_ARATH (Pentatricopeptide repeat-containing protein At1g74600, chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2 SV=1) HSP 1 Score: 48.521 bits (114), Expect = 2.364e-12 Identity = 30/104 (28.85%), Postives = 49/104 (47.12%), Query Frame = 1 Query: 229 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRG 540 I F L+EA+ + M G + +T A++T C SL G+ IH + G++ L + LV MY+ CGS + A +V+D ++L+ G Sbjct: 523 ISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISG 626 HSP 2 Score: 45.4394 bits (106), Expect = 2.364e-12 Identity = 28/98 (28.57%), Postives = 45/98 (45.92%), Query Frame = 2 Query: 515 ILGMLCLEVLSLPGKRGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREGIYPN 808 I +L LS G + HA + K G + +SL+ MY K G I + F + + D++ W ++IA +A + EAL M +G P+ Sbjct: 655 ISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752 HSP 3 Score: 51.2174 bits (121), Expect = 2.600e-11 Identity = 30/90 (33.33%), Postives = 49/90 (54.44%), Query Frame = 2 Query: 527 LCLEVLSLPGKRGLKTHALLIKNGFVDYSILRTSLIDMYFKCGKIKLARRVFDETDDRDIVVWGSMIAGFAHNRLRWEALDCARWMIREG 796 +C SLP RG + H ++ G L ++L++MY KCG +KLAR+V+D + D V S+I+G++ + L + R M+ G Sbjct: 560 VCSSHPSLP--RGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSG 647 HSP 4 Score: 33.4982 bits (75), Expect = 2.600e-11 Identity = 23/104 (22.12%), Postives = 51/104 (49.04%), Query Frame = 1 Query: 229 IQRFARQNKLKEALVILDYMDQQGIPVNVTTFNALITACVRTRSLVEGRLIHTHIRINGLENNGFLRTKLVKMYTSCGSFEDAEKVFDESSSESVYPWNALLRG 540 I F++ K +A+ + M Q+G+ + + +L++ L G+ +H + +GL + + + L +Y+ CGS E++ K+F + W +++ G Sbjct: 425 ITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISG 525 HSP 5 Score: 25.0238 bits (53), Expect = 2.600e-11 Identity = 15/31 (48.39%), Postives = 19/31 (61.29%), Query Frame = 1 Query: 862 LGQEVHAYVLKNERYSEELFVRSSLVDMYCK 954 LG +VHAY+ K +E V SSL+ MY K Sbjct: 670 LGAQVHAYITKIGLCTEP-SVGSSLLTMYSK 699 The following BLAST results are available for this feature:
BLAST of DY263359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 87
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Sequences
The
following sequences are available for this feature:
EST sequence >DY263359 ID=DY263359; Name=DY263359; organism=Citrus clementina; type=EST; length=1312bpback to top |