DY270332

Overview
NameDY270332
Unique NameDY270332
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1295
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.153e-30
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 3.153e-30
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 133.265 bits (334), Expect = 3.153e-30
Identity = 67/72 (93.06%), Postives = 68/72 (94.44%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 131.724 bits (330), Expect = 9.174e-30
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_DAUCA (ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 9.174e-30
Identity = 66/72 (91.67%), Postives = 68/72 (94.44%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3)

HSP 1 Score: 129.798 bits (325), Expect = 3.486e-29
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 4.553e-29
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GLT +KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLTISKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 5.947e-29
Identity = 65/72 (90.28%), Postives = 67/72 (93.06%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+F KLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3)

HSP 1 Score: 126.716 bits (317), Expect = 2.951e-28
Identity = 63/72 (87.50%), Postives = 66/72 (91.67%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+FTKL  RLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNI FTVWD  G D
Sbjct:    1 MGLSFTKLLGRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQD 72
[Close]
BLAST of DY270332 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3)

HSP 1 Score: 125.561 bits (314), Expect = 6.575e-28
Identity = 63/72 (87.50%), Postives = 67/72 (93.06%), Query Frame = 1 
Query:   88 LGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNIIFTVWDGCGHD 303
            +GL+FTKLFSRLFAKKEMRILMVGLDAAGKTTILY+LKLGEIVTTIPTIGFNVETVEY+ I FTVWD  G D
Sbjct:    1 MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTTIPTIGFNVETVEYQYISFTVWDVGGQD 72
The following BLAST results are available for this feature:
BLAST of DY270332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ARF_MAIZE3.153e-3093.06ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 S... [more]
ARF2_ORYSJ3.153e-3093.06ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ3.153e-3093.06ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
ARF_VIGUN9.174e-3091.67ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF1_DAUCA9.174e-3091.67ADP-ribosylation factor 1 OS=Daucus carota GN=ARF1... [more]
ARF2_ARATH3.486e-2990.28ADP-ribosylation factor 2 OS=Arabidopsis thaliana ... [more]
ARF1_SOLTU4.553e-2990.28ADP-ribosylation factor 1 OS=Solanum tuberosum PE=... [more]
ARF1_ARATH5.947e-2990.28ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_SALBA2.951e-2887.50ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 P... [more]
ARF1_CATRO6.575e-2887.50ADP-ribosylation factor 1 OS=Catharanthus roseus G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YE19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270332 ID=DY270332; Name=DY270332; organism=Citrus clementina; type=EST; length=1295bp
GTTGTTAAGCTCTTTAGCTTCGTCCTCCACACCCCCCCCCCTCCCCTCTC
TCTCTCGCGTTCTCTGAAGTGATCCCCAGCTGGAATATTGGGGCTGACTT
TCACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATGCGAATTCTA
ATGGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTACAAGCTCAA
GCTTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTAATGTGGAGA
CCGTTGAATATAAAAACATCATTTTCACTGTGTGGGATGGTTGTGGCCAT
GACAATACATCTTTTTTTGCGGTGGCATGTTCTCTGTTATTCTCACGGCC
CTATTTGTGTTCAGAACAAGGGAACGAATTAGCTGCCTCTAAAGCCTTAG
GAATTGGAATATGTATTTGTTGAACTTTCGAGGTGTTTATATAAAGTGTA
ATCGACTGAAAAGTGAGCCCCTACTCAAATCACAAACACCACCTATACAT
CTGCGCGGTATAATTAAGGCTAAAAAAATATGATTTAAGTTTACATATAA
ATCAAAGAAAGATATTGAAGTGTCATAGAGTGACAACACACGTAACCAAA
ATTATCTTTCTACACTTCCTACCTTCCTCCTTTCCCTTCACACCTCCCTT
CTTAACTACCCTACACCAAACAACTCCCCATATCCCTTAATCCCACCATA
TGCTCCCAAACTACCACCACAACCAATCACTCTGCTCTCACCGAATGCAG
TATTCATCGACTCTGGCTCGAGGTAGACTGATTGCGTTTCTTTCTTATAC
AACTAATCATGTATGACTCCAACAATCCAAAAACAATACATCTGCAGGTA
ATATTTGTAATTCACCCTACTACTTACAATATGTGAATCAAAACTCTAGT
CTGAAATACAGACAACAATACATCTTTCCATCTCCGTCATACCTGGTTCC
TCAATTTCGATTCTTAATTGTTTTTTCAGACTTCCCCTTCCCATCTACAT
ACTAACCTTCAGCTCCACTACATGAGATCTATACTATCTACTCGTTACTA
CGATTACTATATCATCTCCAGTATTATCTACCTTCTATTAAGATCTATAC
CCATTTATTAATACCCACCCAACACACAATCAATCCACTATTAACACCTT
CTATTAAAGTCCTTTCCTTACAAACGCTTATATATATTCTAATATCCTAA
CCTATACTCTCCTGCTATTATTCCATTACCTAATTCATATGTTTCGTCAG
GGAGCTCCGGTTCTTCCATTGTTATCCGTCTACTTTCTATCTTCC
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