DY270387

Overview
NameDY270387
Unique NameDY270387
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1257
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOM_SOLTU (NAD-dependent malic enzyme 62 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 3.634e-84
Identity = 168/267 (62.92%), Postives = 191/267 (71.54%), Query Frame = 2
Query:   71 SNQIRASSSLIRRLKQQMSNPAVLIQTRSFTPSEGQRPVIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQ--NMGSWGIPDFKXXXXXXXXXXXXYVAAEG*NPHRVPFQEDSTLVQIKRDDFENPLKP---RGRHNHPYDG 856
            SNQ+R SS+L++RL Q+++       +R+FT +EG RP IVHKRSLDILHDPWFNKGTAFS TE          PPNVMS +QQI RFM DLKRLEVQARDGP+DP  LAKWRILNRLHDRNET+YYKVL+ NIEEYAPIVYTPTVGLVCQ YSGLFRRPRGMYFSAEDRGEM SMVYNWPA+QVDMIVVTDG++   +G  GI                YVAA G NP RV       ++ +  D+ EN LK     G  +H  DG
Sbjct:    5 SNQMRLSSTLLKRLHQRVAAAVNSSSSRNFTTTEGHRPTIVHKRSLDILHDPWFNKGTAFSFTERDRLHIRGLLPPNVMSFEQQIARFMADLKRLEVQARDGPSDPYVLAKWRILNRLHDRNETLYYKVLMENIEEYAPIVYTPTVGLVCQKYSGLFRRPRGMYFSAEDRGEMMSMVYNWPADQVDMIVVTDGSRILGLGDLGIQGI----GIAIGKLDLYVAAAGINPQRVL----PVMIDVGTDN-ENLLKDPLYLGLQDHRLDG 262          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOM_AMAHP (NAD-dependent malic enzyme 65 kDa isoform, mitochondrial OS=Amaranthus hypochondriacus PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 2.610e-74
Identity = 147/233 (63.09%), Postives = 171/233 (73.39%), Query Frame = 2
Query:   68 MSNQIRASSSLIRRLKQQMSNPAVLIQTRSFTPSEGQRPVIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQ--NMGSWGIPDFKXXXXXXXXXXXXYVAAEG*NPHRV 760
            + ++ R +SSLIRRLK Q++N +     RSF  SEG R  IV+KRSLDIL DPWFNKGTAFSMTE          PPNVM+T+QQIERF  DL+ LE+  +DGP+D   LAKWRILNRLHDRNETM++KVLI NIEEYAPIV TPTVGLVCQ +SGL+RRPRGMYFS++DRGEM SMVYNWPAEQVDMIVVTDG++   +G  G+                YVAA G NP RV
Sbjct:    4 LCSRSRLTSSLIRRLKDQIANVS---NHRSFATSEGHRLAIVNKRSLDILQDPWFNKGTAFSMTERDRLDLRGLLPPNVMTTEQQIERFTADLRVLELTTKDGPSDTYDLAKWRILNRLHDRNETMFFKVLIENIEEYAPIVSTPTVGLVCQKFSGLYRRPRGMYFSSDDRGEMMSMVYNWPAEQVDMIVVTDGSRILGLGDLGV----HGIGVAIGKLDLYVAAAGINPQRV 229          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAON_SOLTU (NAD-dependent malic enzyme 59 kDa isoform, mitochondrial OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 2.372e-59
Identity = 117/200 (58.50%), Postives = 137/200 (68.50%), Query Frame = 2
Query:  182 PVIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG-------SWGIPDFKXXXXXXXXXXXXYVAAEG*NPHRV 760
            P IVHKR  DILHDPWFNK T F MTE          PP V+S +QQ +RFM   + LE      P    +LAKWRILNRLHDRNET+YY+VLI NI+++API+YTPTVGLVCQNYSGLFRRPRGMYFSA+D+GEM SM++NWP+ QVDMIV+TDG++ +G         GIP  K            YVAA G NP RV
Sbjct:   25 PCIVHKRGADILHDPWFNKDTGFPMTERDRLGLRGLLPPRVISFEQQYDRFMESFRSLEKNTEGQPDSVVSLAKWRILNRLHDRNETLYYRVLIDNIKDFAPIIYTPTVGLVCQNYSGLFRRPRGMYFSAKDKGEMMSMIFNWPSTQVDMIVLTDGSRILGLGDLGVQGIGIPIGK---------LDMYVAAAGINPQRV 215          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOH_NEOFR (Malic enzyme, hydrogenosomal OS=Neocallimastix frontalis PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 9.392e-32
Identity = 75/172 (43.60%), Postives = 106/172 (61.63%), Query Frame = 2
Query:  158 FTPSE--GQRPVIVHKRS-LDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG 664
            F PSE   ++ VIV K++ LDIL+DP  NKG+AF+  E          PP   S + Q +R   +L ++        +DP  L K+  LN L +RNET+YYK+++ N  E API+YTP VG  CQ +  +F + RGMYFS  DRG+M ++  NWP + VD+IVVTDG++ +G
Sbjct:   29 FAPSEVYNKKQVIVTKKTGLDILNDPKLNKGSAFTADEKDRLGIRGLVPPRPQSLEAQYKRCKTNLDKI--------SDP--LEKFIYLNHLQNRNETLYYKMILENFVELAPIIYTPVVGEACQKFHKIFTQTRGMYFSTADRGQMSAVAANWPYDDVDVIVVTDGSRILG 190          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAON_HUMAN (NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens GN=ME3 PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 1.148e-29
Identity = 83/235 (35.32%), Postives = 119/235 (50.64%), Query Frame = 2
Query:  179 RPVIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG-------SWGIPDFKXXXXXXXXXXXXYVAAEG*NPHR---VPFQEDSTLVQIKRDDFENPLKPRGRHNHPYD 853
            RPV + KR  D+  +P  NKG AF++ E          PP  +S D Q+ R M   +  E Q  D       L K+ IL  L DRNE ++Y+VL +++E++ PIVYTPTVGL CQ+Y   FRRPRG++ +  D+G + +M+ +WP + +  +VVTDG + +G         GIP  K            Y A  G NP +   V     +   ++ RD     LK +  H   YD
Sbjct:   42 RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIM---RYYERQQSD-------LDKYIILMTLQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHLATMLNSWPEDNIKAVVVTDGERILGLGDLGCYGMGIPVGK---------LALYTACGGVNPQQCLPVLLDVGTNNEELLRDPLYIGLKHQRVHGKAYD 257          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAON_MOUSE (NADP-dependent malic enzyme, mitochondrial OS=Mus musculus GN=Me3 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.363e-29
Identity = 75/200 (37.50%), Postives = 114/200 (57.00%), Query Frame = 2
Query:   65 KMSNQIRASSSLIRRLKQQMSNPAVLIQTRSFTPSEGQRPVIVHKRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG 664
            ++++  R + S +RR  Q  S PA    ++S  P    RPV + KR  D+  +P  NKG AF++ E          PP  +S D Q+ R M   +  E Q  D       L K+ IL    DRNE ++Y+VL +++E++ PIVYTPTVGL CQ+Y   FRRPRG++ +  D+G + +M+ +WP + +  +VVTDG + +G
Sbjct:   10 RLTSVPRIACSSLRR--QAPSAPAQGCHSKSGPP----RPVPLKKRGYDVTRNPHLNKGMAFTLEERLQLGIHGLIPPCFLSQDVQLLRIM---RYYENQQSD-------LDKYIILMTHQDRNEKLFYRVLTSDVEKFMPIVYTPTVGLACQHYGLTFRRPRGLFITIHDKGHIATMLNSWPEDNIKAVVVTDGERILG 193          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOX_COLLI (NADP-dependent malic enzyme OS=Columba livia GN=ME1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.833e-27
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  197 KRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG-------SWGIPDFKXXXXXXXXXXXXYVAAEG*NPHR 757
            K+  ++L DP  NKG AF++ E          PP  +  D Q+   + + +RL           + L ++ +L  L DRNE ++YKVL ++IE + PIVYTPTVGL CQ+Y   FRRPRG++ +  DRG + +M+ +WP   +  IVVTDG + +G         GIP  K            Y A  G  PH+
Sbjct:    2 KKGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDAQVYSILKNFERLT----------SDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQHYGLAFRRPRGLFITIHDRGHIATMLQSWPESVIKAIVVTDGERILGLGDLGCYGMGIPVGK---------LALYTACGGVKPHQ 176          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 1.833e-27
Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  212 ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG 664
            +L DP  NKG AFS  E          PP V+S D Q+++ M +L++  V           L ++  +  L +RNE ++YK+LI N+EE  P+VYTPTVG  CQ Y  +FR+P+G+Y S +D+G++  ++ NWP   + +IVVTDG + +G
Sbjct:  103 LLRDPHHNKGLAFSEKERDAHYLRGLLPPAVVSQDLQVKKIMHNLRQYSVP----------LQRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRQPQGLYVSLKDKGKVLDVLRNWPERNIQVIVVTDGERILG 243          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOX_ANAPL (NADP-dependent malic enzyme OS=Anas platyrhynchos GN=ME1 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.127e-27
Identity = 62/156 (39.74%), Postives = 90/156 (57.69%), Query Frame = 2
Query:  197 KRSLDILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG 664
            KR  ++L DP  NKG AF++ E          PP  +  D Q+   + + +RL           + L ++ +L  L DRNE ++YKVL ++IE + PIVYTPTVGL CQ Y   FRRPRG++ +  DRG + +M+ +WP   +  IVVTDG + +G
Sbjct:    2 KRGYEVLRDPHLNKGMAFTLEERQQLNIHGLLPPCFLGQDVQVFSILKNFERLT----------SDLDRYILLMSLQDRNEKLFYKVLTSDIERFMPIVYTPTVGLACQQYGLAFRRPRGLFITIHDRGHIATMLKSWPESVIKAIVVTDGERILG 147          
BLAST of DY270387 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.084e-27
Identity = 59/151 (39.07%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  212 ILHDPWFNKGTAFSMTEXXXXXXXXXXPPNVMSTDQQIERFMVDLKRLEVQARDGPTDPNALAKWRILNRLHDRNETMYYKVLIANIEEYAPIVYTPTVGLVCQNYSGLFRRPRGMYFSAEDRGEMKSMVYNWPAEQVDMIVVTDGTQNMG 664
            +L DP  NKG AF+  E          PP V++ D Q+++ M ++++ EV           L +++ +  L +RNE ++YK+LI NIEE  PIVYTPTVG  CQ Y  +F+ P+G+Y S +D+G++  ++ NWP +++ +IVVTDG + +G
Sbjct:  111 LLRDPHHNKGLAFTEKERDAHYLRGLLPPVVVNHDLQVKKMMHNIRQYEVP----------LQRYQAMMDLQERNERLFYKLLIENIEELLPIVYTPTVGEACQKYGTIFKNPQGLYISLKDKGKVLEILKNWPQKKIQVIVVTDGERILG 251          
The following BLAST results are available for this feature:
BLAST of DY270387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
MAOM_SOLTU3.634e-8462.92NAD-dependent malic enzyme 62 kDa isoform, mitocho... [more]
MAOM_AMAHP2.610e-7463.09NAD-dependent malic enzyme 65 kDa isoform, mitocho... [more]
MAON_SOLTU2.372e-5958.50NAD-dependent malic enzyme 59 kDa isoform, mitocho... [more]
MAOH_NEOFR9.392e-3243.60Malic enzyme, hydrogenosomal OS=Neocallimastix fro... [more]
MAON_HUMAN1.148e-2935.32NADP-dependent malic enzyme, mitochondrial OS=Homo... [more]
MAON_MOUSE4.363e-2937.50NADP-dependent malic enzyme, mitochondrial OS=Mus ... [more]
MAOX_COLLI1.833e-2736.08NADP-dependent malic enzyme OS=Columba livia GN=ME... [more]
MAOC_ORYSJ1.833e-2739.74NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_ANAPL3.127e-2739.74NADP-dependent malic enzyme OS=Anas platyrhynchos ... [more]
MAOC_FLAPR4.084e-2739.07NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YH10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270387 ID=DY270387; Name=DY270387; organism=Citrus clementina; type=EST; length=1257bp
GGTTTTGAAGTTCTTACGGATTGCAGAGTTTGCAGTGATTGAGTTGCGCA
GCAAATCATAGATAAAAATGTCAAATCAGATCAGAGCATCGTCGTCTCTG
ATCAGACGGCTCAAACAACAAATGTCGAATCCAGCGGTGTTGATTCAGAC
AAGATCGTTTACTCCAAGTGAAGGACAACGTCCTGTTATTGTCCACAAGC
GTAGTCTTGACATTCTCCACGATCCTTGGTTTAATAAGGGAACAGCGTTT
TCCATGACAGAACGTGATCGCCTTGATCTTCGAGGACTGCTCCCTCCCAA
TGTTATGTCTACTGATCAACAAATTGAACGCTTCATGGTTGACTTGAAGA
GGCTTGAGGTGCAAGCAAGAGATGGACCGACTGATCCAAATGCTCTGGCC
AAGTGGCGAATACTTAATCGATTGCATGACAGAAATGAGACAATGTACTA
CAAGGTTTTAATTGCAAATATCGAGGAATATGCGCCAATCGTCTATACCC
CAACTGTAGGTCTTGTTTGTCAGAACTACAGTGGTTTGTTCAGAAGACCT
AGGGGCATGTATTTTAGCGCTGAAGATCGTGGAGAAATGAAGTCAATGGT
TTATAACTGGCCTGCTGAACAGGTTGATATGATTGTTGTTACCGATGGGA
CACAAAATATGGGGTCCTGGGGGATCCCGGACTTCAAGGCTAATGAAAAT
GCCAATTGGGAAAACCTGGAATTATACGTTGCGGCCGAAGGCTAAAATCC
CCACAGGGTACCTTTCCAAGAGGACTCCACTTTGGTACAAATCAAACGCG
ACGACTTTGAGAACCCCCTTAAACCACGGGGTCGACACAACCACCCCTAC
GATGGCAACAGATAAAACTTACACAAAGAAAAGGATAAGTACCCAACTAT
CACCCTCGGTCGCCGAATACCCCCCGTCTCCATATAACTAGTCTTCACAT
TGCTACTAAATCATGCATAGCAAACTTGGCTGAACAACAATGCGTCACTG
ACACAACACACACTCCCTTGGCAGAACGTCGTGCTAGCTGGGCACAGACA
GCGTATCGAATAAAATAGAAGATGAAGATAACAATGTTTGCAAAAAATAA
CATTCCGTTCATAAATGTAATACTACAACGAATTTTAGACTGCAAAACAT
CTTATGTCTCTTAACTCGTAAAACATTACTAACAAACGAAAAAAAAACAT
AATCATACCACCGCCCGCTCACCCTCCCAGAACCTCAACACCCCTCCGCA
ACGAAGT
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