DY270412

Overview
NameDY270412
Unique NameDY270412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1245
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15333 contig Ccv1_Contig15333:229..1473. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAH2_FLALI (Carbonic anhydrase 2 (Fragment) OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 1.092e-76
Identity = 132/166 (79.52%), Postives = 146/166 (87.95%), Query Frame = 2
Query:   59 NPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEGS 556
            NP LYG LAKGQSPKFLVFACSDSRVCPSHIL+FQP EAF+VRNIANMVPPYD  K+SGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPD+GT ASDFIE+WVK+   AKSKVK  CN+L F + C  CEKEAVNVSLGNLLTYPFVR+++V   L+ +G+
Sbjct:    1 NPTLYGELAKGQSPKFLVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPYDTIKHSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTPASDFIEQWVKLGLPAKSKVKANCNNLEFADLCTKCEKEAVNVSLGNLLTYPFVRDALVNKKLSLKGA 166          

HSP 2 Score: 36.1946 bits (82), Expect = 1.092e-76
Identity = 13/17 (76.47%), Postives = 16/17 (94.12%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELWD 596
            LKGAHYDF+NG F+LW+
Sbjct:  163 LKGAHYDFVNGAFDLWN 179          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHC_SPIOL (Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 265.003 bits (676), Expect = 6.957e-73
Identity = 126/168 (75.00%), Postives = 144/168 (85.71%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            ++KNP LYG L+KGQ+PKF+VFACSDSRVCPSH+L+FQP EAFMVRNIANMVP +D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS PD G T +DFIE+WVKIC  AK KV  E  + +F EQC +CEKEAVNVSLGNLLTYPFVR+ +VK TLA +G
Sbjct:  127 YEKNPALYGELSKGQAPKFMVFACSDSRVCPSHVLDFQPGEAFMVRNIANMVPVFDKDKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPDAGPTTTDFIEDWVKICLPAKHKVLAEHGNATFAEQCTHCEKEAVNVSLGNLLTYPFVRDGLVKKTLALQG 294          

HSP 2 Score: 31.9574 bits (71), Expect = 6.957e-73
Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            L+G +YDF+NG FELW
Sbjct:  292 LQGGYYDFVNGSFELW 307          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAH2_ARATH (Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA2 PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 7.608e-72
Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            ++ NP LYG LAKGQSPK++VFACSDSRVCPSH+L+F P +AF+VRNIANMVPP+D+ KY+G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKSKV  E    +FE+QC  CE+EAVNVSL NLLTYPFVRE VVK TLA +G
Sbjct:   67 YETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFHPGDAFVVRNIANMVPPFDKVKYAGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVLAESESSAFEDQCGRCEREAVNVSLANLLTYPFVREGVVKGTLALKG 234          

HSP 2 Score: 34.2686 bits (77), Expect = 7.608e-72
Identity = 12/17 (70.59%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELWD 596
            LKG +YDF+NG FELW+
Sbjct:  232 LKGGYYDFVNGSFELWE 248          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHC_TOBAC (Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 9.902e-72
Identity = 125/168 (74.40%), Postives = 144/168 (85.71%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            ++KNP LYG L+KGQSPKF+VFACSDSRVCPSH+LNFQP EAF+VRNIANMVP YD+ +YSG GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS+P +G+ ++ FIE+WVKI   AK+KV+ E  D  F +QC  CEKEAVNVSLGNLLTYPFVRE +VK TLA +G
Sbjct:  129 YEKNPALYGELSKGQSPKFMVFACSDSRVCPSHVLNFQPGEAFVVRNIANMVPAYDKTRYSGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSLPADGSESTAFIEDWVKIGLPAKAKVQGEHVDKCFADQCTACEKEAVNVSLGNLLTYPFVREGLVKKTLALKG 296          

HSP 2 Score: 35.039 bits (79), Expect = 9.902e-72
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG HYDF+NG FELW
Sbjct:  294 LKGGHYDFVNGGFELW 309          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHC_ARATH (Carbonic anhydrase, chloroplastic OS=Arabidopsis thaliana GN=CA1 PE=1 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 1.291e-71
Identity = 124/168 (73.81%), Postives = 143/168 (85.12%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            ++ NP LYG LAKGQSPK++VFACSDSRVCPSH+L+FQP +AF+VRNIANMVPP+D+ KY G GAAIEYAVLHLKVENIVVIGHS CGGIKGLMS P +G  ++DFIE+WVKIC  AKSKV  E  D +FE+QC  CE+EAVNVSL NLLTYPFVRE +VK TLA +G
Sbjct:  144 YETNPALYGELAKGQSPKYMVFACSDSRVCPSHVLDFQPGDAFVVRNIANMVPPFDKVKYGGVGAAIEYAVLHLKVENIVVIGHSACGGIKGLMSFPLDGNNSTDFIEDWVKICLPAKSKVISELGDSAFEDQCGRCEREAVNVSLANLLTYPFVREGLVKGTLALKG 311          

HSP 2 Score: 30.8018 bits (68), Expect = 1.291e-71
Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG +YDF+ G FELW
Sbjct:  309 LKGGYYDFVKGAFELW 324          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAH1_FLALI (Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 5.315e-70
Identity = 119/168 (70.83%), Postives = 138/168 (82.14%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            F  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQP EAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLA +G
Sbjct:  138 FVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVQCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 305          

HSP 2 Score: 35.4242 bits (80), Expect = 5.315e-70
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG HYDF+NG FELW
Sbjct:  303 LKGGHYDFVNGTFELW 318          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHX_FLABR (Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1)

HSP 1 Score: 250.751 bits (639), Expect = 1.179e-69
Identity = 119/168 (70.83%), Postives = 138/168 (82.14%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            F  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQP EAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLA +G
Sbjct:  138 FVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 305          

HSP 2 Score: 35.4242 bits (80), Expect = 1.179e-69
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG HYDF+NG FELW
Sbjct:  303 LKGGHYDFVNGTFELW 318          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHX_FLAPR (Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 1.537e-69
Identity = 119/168 (70.83%), Postives = 138/168 (82.14%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            F  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQP EAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +  NTLA +G
Sbjct:  137 FVTNPVLYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNNTLALKG 304          

HSP 2 Score: 35.4242 bits (80), Expect = 1.537e-69
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG HYDF+NG FELW
Sbjct:  302 LKGGHYDFVNGTFELW 317          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHX_FLABI (Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2)

HSP 1 Score: 248.44 bits (633), Expect = 5.798e-69
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEG 553
            F  NP LY  LAKGQSPKF+VFACSDSRVCPSH+L+FQP EAF+VRN+ANMVPP+D+ KYSG GAA+EYAVLHLKV+ I VIGHS CGGIKGLM+ PD G  ++DFIE+WVK+C  AKSKV  E N    ++QC  CEKEAVNVSLGNLLTYPFVR+ +   TLA +G
Sbjct:  138 FVTNPALYDELAKGQSPKFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPFDKTKYSGVGAAVEYAVLHLKVQEIFVIGHSRCGGIKGLMTFPDEGPHSTDFIEDWVKVCLPAKSKVVAEHNGTHLDDQCVLCEKEAVNVSLGNLLTYPFVRDGLRNKTLALKG 305          

HSP 2 Score: 35.4242 bits (80), Expect = 5.798e-69
Identity = 13/16 (81.25%), Postives = 14/16 (87.50%), Query Frame = 3
Query:  546 LKGAHYDFLNGKFELW 593
            LKG HYDF+NG FELW
Sbjct:  303 LKGGHYDFVNGTFELW 318          
BLAST of DY270412 vs. ExPASy Swiss-Prot
Match: CAHC_PEA (Carbonic anhydrase, chloroplastic OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 1.369e-67
Identity = 129/191 (67.54%), Postives = 148/191 (77.49%), Query Frame = 2
Query:   50 FKKNPDLYGALAKGQSPKFLVFACSDSRVCPSHILNFQPREAFMVRNIANMVPPYDQKKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDNGTTASDFIEEWVKICSSAKSKVKKECNDLSFEEQCKNCEKEAVNVSLGNLLTYPFVRESVVKNTLAAEGSTL*FPQWKI*TLG---SLTSTF 613
            + KNP LYG LAKGQSP F+VFACSDSRVCPSH+L+FQP EAF+VRN+AN+VPPYDQ KY+G GAAIEYAVLHLKV NIVVIGHS CGGIKGL+S P +GT ++DFIEEWVKI   AK+KVK +  D  F E C +CEKEAVN SLGNLLTYPFVRE +V  TLA +G    F +      G    L+STF
Sbjct:  136 YDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQAKYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGTYSTDFIEEWVKIGLPAKAKVKAQHGDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTF 326          
The following BLAST results are available for this feature:
BLAST of DY270412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CAH2_FLALI1.092e-7679.52Carbonic anhydrase 2 (Fragment) OS=Flaveria linear... [more]
CAHC_SPIOL6.957e-7375.00Carbonic anhydrase, chloroplastic OS=Spinacia oler... [more]
CAH2_ARATH7.608e-7273.21Carbonic anhydrase 2 OS=Arabidopsis thaliana GN=CA... [more]
CAHC_TOBAC9.902e-7274.40Carbonic anhydrase, chloroplastic OS=Nicotiana tab... [more]
CAHC_ARATH1.291e-7173.81Carbonic anhydrase, chloroplastic OS=Arabidopsis t... [more]
CAH1_FLALI5.315e-7070.83Carbonic anhydrase 1 OS=Flaveria linearis PE=2 SV=... [more]
CAHX_FLABR1.179e-6970.83Carbonic anhydrase OS=Flaveria brownii PE=2 SV=1[more]
CAHX_FLAPR1.537e-6970.83Carbonic anhydrase OS=Flaveria pringlei PE=2 SV=1[more]
CAHX_FLABI5.798e-6970.24Carbonic anhydrase OS=Flaveria bidentis PE=2 SV=2[more]
CAHC_PEA1.369e-6767.54Carbonic anhydrase, chloroplastic OS=Pisum sativum... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YI13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270412 ID=DY270412; Name=DY270412; organism=Citrus clementina; type=EST; length=1245bp
GAAATTGTTCAGCCGATGGACGTGATCACTGATGCTTTGCCTTGTTTTTT
TCAAGAAGAATCCTGATTTGTACGGTGCACTGGCCAAAGGCCAAAGCCCC
AAGTTTCTGGTATTTGCATGCTCAGACTCTCGAGTATGTCCATCCCATAT
CCTCAATTTTCAACCAAGAGAGGCGTTTATGGTTCGAAACATTGCCAATA
TGGTCCCTCCATATGACCAGAAAAAATACTCTGGAGCAGGTGCAGCCATT
GAATATGCGGTGCTACATCTGAAGGTGGAGAATATTGTAGTCATTGGACA
CAGTTGCTGTGGTGGTATAAAGGGGCTCATGTCTATCCCTGATAATGGGA
CCACTGCGAGTGATTTCATAGAAGAGTGGGTCAAAATCTGTTCATCTGCC
AAGTCCAAGGTGAAAAAAGAATGCAATGATTTGAGTTTTGAGGAGCAATG
CAAGAACTGTGAAAAGGAGGCTGTGAATGTGTCCCTTGGAAACCTATTGA
CATACCCATTTGTGAGAGAGAGCGTGGTGAAGAACACCCTGGCCGCTGAA
GGGAGCACATTATGATTTCCTCAATGGAAAATTTGAACTTTGGGATCCTT
GACCTCCACATTTTACCTTCTGTACCTGGTCTGAGCCCTTGATGCATAAT
ACCCGGTTGCCCCAGCCTCCATGAATTTTCACAATTAAAGCCCATACTTG
AACTGTGCCTTTGTACTTGTGCCTTCTCCTCCTGAACACCAACACCACTT
CTCACCCTCTGGTATTTGGCCCAAATAATCCAACCGAGGGTTCCTATAAT
AACAAATTGAAAAGGAAAATTTCCCCTCCCGTAACACAAAAAACAAACAA
AAAAAATCAAACACATACTTGTGGGTAATAATCCTAGAACTACTAAAAAC
AAAATTCCTCCCCTTTTCCCCCCCACCACCCCCGAATCCACCCCTCCTAC
CCCCCCCAAAACCTACACCAATCACCCCCACTCAATATCCCCACTCAATA
ACTCCCTCTTCGACCTCCCCACCTACCCCCCACACTCCTCCCCTAACCTT
TTACTCCACCCAACAACCCTCTATATCCCATCGCCTCCCTCCTCATCAAT
CATCATACTACTACCCTCCACCATCATCCAACCTCCCTCCCCTCACCCCC
TTACATCTCTTTCCACTGCCCCCTCCCCCATTCCCTTATCACTATCATAC
TCTTAACTACTCATCTTCCCATTACCACTACTACGTTCTACATAC
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