DY270422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_MOUSE (Serine palmitoyltransferase 1 OS=Mus musculus GN=Sptlc1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 3.291e-23 Identity = 61/140 (43.57%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+PP+ + + S H I+ +GKE VNFAS N+LGL + ++ + S+LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTAKEKEELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAAAFSSLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMKTEEAIIYSYGFSTVASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_HUMAN (Serine palmitoyltransferase 1 OS=Homo sapiens GN=SPTLC1 PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.299e-23 Identity = 59/140 (42.14%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPH-TIISGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H T+++GKE +NFAS N+LGL + ++ + ++LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKTVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_BOVIN (Serine palmitoyltransferase 1 OS=Bos taurus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 4.299e-23 Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H I+ +GKE +NFAS N+LGL + +L + ++LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTLKEKEELIEEWQPEPLVPPVSKDHPALNYNIVSGPPSHNIVVNGKECINFASFNFLGLLDNPRLKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_CRIGR (Serine palmitoyltransferase 1 OS=Cricetulus griseus GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 7.332e-23 Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+PP+ + + S H I+ +GKE VNFAS N+LGL + ++ + ++LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTAKEKEELIEEWQPEPLVPPVSKNHPALNYNIVSGPPTHNIVVNGKECVNFASFNFLGLLANPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEERLAKFMRTEEAIIYSYGFSTIASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_MACFA (Serine palmitoyltransferase 1 OS=Macaca fascicularis GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.633e-22 Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+PP+ ++ + S H I+ +GKE +NFAS N+LGL + ++ + ++LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPPVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_PONAB (Serine palmitoyltransferase 1 OS=Pongo abelii GN=SPTLC1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.359e-21 Identity = 58/140 (41.43%), Postives = 84/140 (60.00%), Query Frame = 3 Query: 507 KSYKPPKRP-LTKKEIDELCDEWVPESLIPPIIEEMQCEPPVLESAAGPHTII-SGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 K+YK +R LT KE +EL +EW PE L+P + ++ + S H I+ +GKE +NFAS N+LGL + ++ + ++LKKYGVG+CGP GF GT +VHLD + KF+ T E YS G AIP + ++ Sbjct: 42 KTYKLQERSDLTVKEKEELIEEWQPEPLVPLVPKDHPALNYNIVSGPPSHKIVVNGKECINFASFNFLGLLDNPRVKAAALASLKKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIASAIPAYSKR 181
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: SPTC1_DICDI (Serine palmitoyltransferase 1 OS=Dictyostelium discoideum GN=sptA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.294e-19 Identity = 55/140 (39.29%), Postives = 80/140 (57.14%), Query Frame = 3 Query: 501 SQKSYKPPKRP-LTKKEIDELCDEWVPESLIPPI--IEEMQCEPPVLESAAGPHTIISGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVF 911 +++ +KP + LTK E DEL EW P L P +E + +++ + G H I+ K+ +N A +NYLGL + ++ + +A++KYGVGSCGP GF GTI+VHLD + F+ TPE YS AIP F Sbjct: 41 TKRPFKPRQNDTLTKAEEDELIREWSPIPLTPKSNPLEVLNQTELIIQESEGTHVTINNKKYLNLARSNYLGLINNPEINKISENAIRKYGVGSCGPRGFYGTIDVHLDLEKKTASFMKTPEAVLYSSAYATISSAIPSF 180
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: LCB1_SCHPO (Serine palmitoyltransferase 1 OS=Schizosaccharomyces pombe GN=lcb1 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 3.897e-16 Identity = 46/131 (35.11%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 537 TKKEIDELCDEWVPESLIPPI--IEEMQCEP-PVLESAAGPHTIISGKEVVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 T+KEI+EL D+W PE L+ + +E+++ + PVLES +I G+ + NFAS N+L L ++ + E + L++ G+G+CGPPGF GT + HL ++ F+G Y+ IP F ++ Sbjct: 80 TEKEINELVDDWKPEPLVAELTDVEKLELKSIPVLESVHLHTKLIDGRPITNFASFNFLDLAENKHITECAVATLRECGLGACGPPGFYGTQDKHLRLEKDIASFIGVERAIVYAQSFQTISSVIPAFSKR 210
BLAST of DY270422 vs. ExPASy Swiss-Prot
Match: LCB1_YEAST (Serine palmitoyltransferase 1 OS=Saccharomyces cerevisiae GN=LCB1 PE=1 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 9.933e-12 Identity = 46/151 (30.46%), Postives = 68/151 (45.03%), Query Frame = 3 Query: 504 QKSYKPPKRPLTKKEIDELCDEWVPESLIPPIIEEMQC-----EPPVLESAAGPHTIISGKE-------VVNFASANYLGLKGHEKLPESCTSALKKYGVGSCGPPGFLGTINVHLDCGPEMPKFLGTPEFTPYS*GTFPQFGAIPVFRQK 920 +KS + K L+ +EID L ++W PE L+ P + Q P +E H I+ V N AS N+L L E + E + +K YGVG+CGP GF G +VH ++ +F GT Y +P F ++ Sbjct: 78 KKSLQAQKPNLSPQEIDALIEDWEPEPLVDPSATDEQSWRVAKTPVTMEMPIQNHITITRNNLQEKYTNVFNLASNNFLQLSATEPVKEVVKTTIKNYGVGACGPAGFYGNQDVHYTLEYDLAQFFGTQGSVLYGQDFCAAPSVLPAFTKR 228 The following BLAST results are available for this feature:
BLAST of DY270422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270422 ID=DY270422; Name=DY270422; organism=Citrus clementina; type=EST; length=1178bpback to top |