DY270440

Overview
NameDY270440
Unique NameDY270440
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1082
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270440 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 6.528e-23
Identity = 67/185 (36.22%), Postives = 99/185 (53.51%), Query Frame = 2
Query:   35 MKTSFVVKLSFLILALATKAQ---LGTSESEPVLDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTSGE-CPLDVVQLSSPTERDHYVRLLPFDNST-VVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPRAKTLLNWFKLEKVSVSIYNLVHCPSVCDSCVKLCNKV 541
            MKT+  V L  L+ A  +K+    +  + + PVLD  G+++++ ++Y +L   +G  GG    G  +G+ CP  VVQ  S  +    V     D+   VVR STD+N+              VW + NY++S GKW++TT G+ G P   TL +WFK+EK  V  Y    CPSVCDSC  LC+ +
Sbjct:    1 MKTATAVVL--LLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLGYKFRFCPSVCDSCTTLCSDI 183          
BLAST of DY270440 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 8.822e-20
Identity = 65/193 (33.68%), Postives = 95/193 (49.22%), Query Frame = 2
Query:   35 MKTSFVVKLSFL----ILALATKAQLGTSES--EPVLDVYGNKVESNLEYKLLEVKNGTSGGFSIHGGTSGE---CPLDVVQLSSPTERDHYVRLLPFD-NSTVVRESTDLNL-----------IEPVWTVGNYNDSLGKWFLTTGGIIGHPRAKTLLNWFKLEKVSVS-IYNLVHCPSVCDSCVKLCNKVRI 547
            MK   ++ LSF     +LA A    L  ++S   PVLD+ G K+ +   Y ++ V     GG ++   T      CP  VVQ     + D  +   P +    VVR STDLN+              VW +  Y++S G++F+T GG+ G+P  +T+ +WFK+E+   S  Y LV CP+VC SC   C  V I
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGFYKLVFCPTVCGSCKVKCGDVGI 193          
The following BLAST results are available for this feature:
BLAST of DY270440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ASP_THECC6.528e-2336.2221 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU8.822e-2033.68Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270440 ID=DY270440; Name=DY270440; organism=Citrus clementina; type=EST; length=1082bp
CAGAAGTTAGCTTTTCTTCAAATAAATAAATAAAATGAAGACTTCATTCG
TAGTAAAACTCTCATTCCTTATCCTTGCCTTGGCCACAAAAGCTCAGTTG
GGCACCTCAGAATCTGAACCAGTCTTAGATGTCTATGGCAACAAGGTCGA
ATCCAACCTCGAGTATAAGCTTCTCGAAGTCAAAAATGGCACTAGTGGTG
GATTCAGTATACATGGAGGCACAAGTGGAGAGTGTCCGTTGGACGTTGTC
CAACTAAGTTCTCCTACGGAAAGGGATCATTATGTAAGATTATTACCGTT
TGACAATTCTACAGTTGTCCGGGAATCCACTGATCTCAACTTGATAGAAC
CAGTATGGACAGTTGGAAACTATAATGATTCATTAGGAAAATGGTTTCTA
ACAACCGGCGGAATCATCGGCCACCCAAGAGCTAAAACGTTGCTAAATTG
GTTTAAGCTTGAGAAAGTTAGTGTCAGTATATACAATCTTGTTCATTGTC
CATCTGTTTGCGATTCTTGCGTTAAACTCTGTAACAAAGTCCGCATCCTT
CCATGTGGACCGGGTTCGACGTCTAGTTCTGGTTCCTGATGATGATCACC
CTCTGCGGCTGGGGTTATTTCCGCCTCCCTAATCCCTCCTAGAATCTCTA
TGAATGAAATTACCTACTAAAATAATATATCTAAAATAATAACCAAGGCA
AGCCAATCATACACCCCCCCCCACCCCATTTATTATTTTTTTTCATCTTG
TTTTATATCTCTCCTATTAATTTCTCTTTTTTTATGTCTTTCGTGCGCCT
AAATCTCTCCCTCCTTCCCCCTGCACCTTTGCTTTTTCGTCCTCACCTCT
CTGCATCTCTCACTTTTGCTCTCCTTCCGCTCTTCCCTCTATCCTCCCCT
ACACATACCTCCCTTTGTCCACCCCCCCTTAACACCCCCCCTCTTCCCCA
ATACCTTCCCTTATTCTAGCCTTATCTGATTTAGCAGTCAATCCCTCTTT
CTCTCCTGCTACTTACTTTTGTTTTAGTAATGAACGTTATTTGTTGTACT
CGTGCACACGCCTCCTCTTCCTTCTCATCTAA
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