DY270572

Overview
NameDY270572
Unique NameDY270572
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY270572 vs. ExPASy Swiss-Prot
Match: USPAL_ARATH (Universal stress protein A-like protein OS=Arabidopsis thaliana GN=At3g01520 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 49/159 (30.82%), Postives = 72/159 (45.28%), Query Frame = 2 
Query:   59 KILVAVDEGEESMY---------ALTWCLTNVISPNSKDTLILXXXXXXXXXYTALDGTGYLFSTDIMSTMEQYHNDAADRLIEKAKNMCKDHVNDVEVETTVESGDPRDVICEMVQSLGVDVLVMGSHGYCWFEKAFLGSVTFHCALDVQCPVLIIKR 508
            K++VAV+      Y         A  W L  ++  N+ D  IL             D      S +    M Q +      L+E   N C  H   V  E  +++GDP+DVIC+ V+ +  D LV+GS G   F+K F+G+V+  C    +CPV+ IKR
Sbjct:    7 KVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNKAKGLHLLEFFVNKC--HEIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIKR 163
The following BLAST results are available for this feature:
BLAST of DY270572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
USPAL_ARATH3.486e-1230.82Universal stress protein A-like protein OS=Arabido... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP7YA13FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270572 ID=DY270572; Name=DY270572; organism=Citrus clementina; type=EST; length=706bp
CAGCCTTTTGATCATAGCAGAGATCATGTCAGTTGGTGACGCGGCGGCGA
AAGAGAGGAAGATCCTCGTGGCAGTTGATGAGGGTGAGGAGAGCATGTAT
GCTCTCACCTGGTGTCTCACAAATGTGATTTCTCCCAATTCCAAGGATAC
CCTCATCCTGCGCCCTGCTCGCGCCCCCAGAGCTGCTTACACTGCTTTGG
ATGGCACAGGGTATTTGTTTTCCACTGATATCATGTCGACGATGGAGCAG
TACCATAACGACGCTGCTGACCGTCTGATCGAGAAGGCCAAGAATATGTG
TAAAGATCATGTTAACGATGTTGAGGTGGAGACGACAGTTGAGTCCGGTG
ATCCCAGGGACGTGATTTGCGAGATGGTACAAAGCCTGGGTGTGGACGTG
TTAGTCATGGGTAGCCATGGCTACTGTTGGTTCGAAAAGGCCTTCTTGGG
GAGTGTGACCTTTCATTGTGCACTGGATGTGCAGTGTCCCGTCTTGATCA
TTAAAAGGCCCCTATCCCCTCTCATGGAAAGTAAATAATCTGCTTTTGTT
CTGAGACACTTTATGTTGTGTATTGAATGATCTTCCTTCTTAATTTTTCC
CTTTTTGTCGCGTTGTGATTGTGTGTACTTACCAATAAAATCTATCGACT
ATGATAAGTTTGTTTGTGAAGGTTTTTGGTAAAAAAAAAAGAACATATAT
ACCCGT
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