DY270583

Overview
NameDY270583
Unique NameDY270583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1127
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.842e-77
Identity = 141/200 (70.50%), Postives = 164/200 (82.00%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFIN 700
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK AK EDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LAQAFQLD   +KDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 2.842e-77
Identity = 141/200 (70.50%), Postives = 164/200 (82.00%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFIN 700
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK AK EDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LAQAFQLD   +KDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 3.712e-77
Identity = 141/200 (70.50%), Postives = 164/200 (82.00%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFIN 700
            YDPSPLQD CVAI++PK+GVFVNGKFCKDPK AK EDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LAQAFQLD   +KDL+ KF N
Sbjct:   22 YDPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 221          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.848e-77
Identity = 148/231 (64.07%), Postives = 177/231 (76.62%), Query Frame = 2
Query:    8 ISTSC*LITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFIN 700
            +S S  LIT+ A+  +I FA           YDPSPLQD CVAI++ K+GVFVNGKFCKDPK AK EDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVL  GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LAQAFQLD   +KDL+ KF N
Sbjct:    3 VSKSLILITLSAL--VISFA---------EAYDPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKFRN 222          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 285.804 bits (730), Expect = 3.143e-76
Identity = 148/230 (64.35%), Postives = 174/230 (75.65%), Query Frame = 2
Query:   11 STSC*LITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFIN 700
            S S  LIT+ A+  +I FA            DPSPLQD CVAI + K+GVFVNGKFCKDPK AK EDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRA+EIL+++EGTL+VGFV+S+Q NN L +KVLN GD FVFPIG+IHFQ NIGKT AVA++ L+SQ  G ITIAD VFG+ PPINPD LAQAFQLD   +KDL+ KF N
Sbjct:    4 SKSLILITLSAL--VISFAEAN---------DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKFKN 222          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 276.944 bits (707), Expect = 1.460e-73
Identity = 136/220 (61.82%), Postives = 168/220 (76.36%), Query Frame = 2
Query:   35 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK    +DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   +K+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 1.907e-73
Identity = 136/220 (61.82%), Postives = 168/220 (76.36%), Query Frame = 2
Query:   35 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            M+  Q L+ FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDPK    +DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ N+GK  AVA++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   +K+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 3.252e-73
Identity = 136/220 (61.82%), Postives = 168/220 (76.36%), Query Frame = 2
Query:   35 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            M+  Q LI FA+          YDPSPLQD CVAI++ K GVFVNG+FCKDP+    +DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR SEIL+++EGTL+VGFV+S+Q NN L +KVL+ GD FVFPIG+IHFQ NIGK  A+A++ L+SQ  G ITIA+ VFG+NPPI P+ LA+AFQLD   +K+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 6.781e-71
Identity = 132/202 (65.35%), Postives = 159/202 (78.71%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKFINGH 706
            YDPSPLQD CVA+++   GVFVNGKFCKDPK  K EDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRA+EIL+V+EGTL VGFVTS+Q NN L SKVL  GD FVFPIG+IHFQ N+G+TNAVA++ L SQ PG ITIADAVFG+ P I P+ LA+AFQLD   +K L+ +F + +
Sbjct:   25 YDPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARFSSNY 225          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 7.017e-68
Identity = 124/222 (55.86%), Postives = 160/222 (72.07%), Query Frame = 2
Query:   29 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            +T+K++ FL   ++           DPSPLQD CV +N P DGVFVNGKFCKDP++   +DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRA+EIL+V +GTL VGF++S+Q  N L +K LN GD FVFP GLIHFQFN+G T AVA +AL+SQ  G ITIA+ +FG+ P ++P+ LA+AFQ+D   +++LQ +F
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
The following BLAST results are available for this feature:
BLAST of DY270583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH2.842e-7770.50Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH2.842e-7770.50Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL119_ARATH3.712e-7770.50Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH4.848e-7764.07Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL114_ARATH3.143e-7664.35Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL118_ARATH1.460e-7361.82Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH1.907e-7361.82Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH3.252e-7361.82Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH6.781e-7165.35Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH7.017e-6855.86Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP7YB04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270583 ID=DY270583; Name=DY270583; organism=Citrus clementina; type=EST; length=1127bp
GTTTGAGATAAGCACGTCCTGTTAATTAATCACCATGAAGGCAATTCAAT
TTCTTATAGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCC
TATGACCCTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAA
GGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGA
AACCAGAAGATTTCTTCTTCTCAGGGCTTGGCAAGCCTGGAAACACAGCA
AATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGG
ACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATG
GCCAAAGGCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTC
CTGGAAGGAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAA
CACACTCATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAA
TTGGTTTGATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCC
TATTCTGCTCTCAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGC
GGTCTTTGGAGCCAATCCTCCAATAAATCCCGATTTTCTTGCCCAGGCAT
TCCAGTTGGACCCGAAGACAATGAAAGATCTTCAGCATAAGTTCATTAAT
GGCCATTAGGAAAAGGAATTAATGAGCTTTAAAAAAATGGCCCCCTTAAT
AGTGCCTTTATTGTTTTAACTCCAAATTAACAAATCTTAATTAATGGAAA
AAAAAACTCCCTCCTGAACCTCTCTTCCGGCTGAATGAAGCCATGAAATA
AACATAATTTATGGTTTGTTTTATTTAAAAAAAAAAAAAAAAAAAAAAAA
AAACCCACCTTTCCTGGTAAAAGTTGGCCTTAAAAAAAAACCCTTTCCTA
ACATTTTGTTTCCCCCAACCCGTTCTCCTTCATCCCAAAAAAAAATATTA
TTTTCCCCCCCCCCCCAAAACCCCCCCAAAAGGAATCCAAAATACAAAGC
TCAAAAACCCTTTTCTCCGACAACCCCCTGGCCCCCACTCCTCCCAAATT
CCCCCAAGATGTTAATCTTCCCACACA
back to top