DY270864
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD41_ARATH (LOB domain-containing protein 41 OS=Arabidopsis thaliana GN=LBD41 PE=2 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 3.909e-56 Identity = 105/156 (67.31%), Postives = 123/156 (78.85%), Query Frame = 3 Query: 51 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESA-------LQAGDIRHVSKDEXXXXXXXGSDKLHKVKSRR 497 MR+SCNGCRVLRKGC E+CSIRPCL WIKSP+ QANAT+FLAKFYGRAGL+NLINAGP LRP IF+SLL+EACGRIVNPIYGSVGL+WSG W LCQ AVEAV +GEPV +++++A L+ DIRH+SKD+ GS L K+RR Sbjct: 1 MRMSCNGCRVLRKGCSEDCSIRPCLAWIKSPEAQANATVFLAKFYGRAGLMNLINAGPNHLRPGIFRSLLHEACGRIVNPIYGSVGLLWSGNWQLCQDAVEAVMKGEPVKEIATDAATIGQGPPLKIYDIRHISKDDNSAAAATGSTDLKLAKTRR 156
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD40_ARATH (LOB domain-containing protein 40 OS=Arabidopsis thaliana GN=LBD40 PE=2 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 8.707e-56 Identity = 106/151 (70.20%), Postives = 121/151 (80.13%), Query Frame = 3 Query: 51 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLSSESAL---------QAGDIRHV-SKDEXXXXXXXGSDK 473 MR+SCNGCRVLRKGC ENCSIRPCLQWIKS + QANAT+FLAKFYGRAGL+NL+N GP LRPAIF+SLLYEACGRIVNPIYGSVGL+WSG WHLCQAAVEAV RG PVTP++ ++A+ + DIRHV S+DE G+ K Sbjct: 1 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSAESQANATVFLAKFYGRAGLMNLLNTGPDHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGNWHLCQAAVEAVMRGSPVTPIACDAAVTGQAPPFNNKLCDIRHVSSRDENVKRRSRGACK 151
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD42_ARATH (LOB domain-containing protein 42 OS=Arabidopsis thaliana GN=LBD42 PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 5.467e-50 Identity = 98/138 (71.01%), Postives = 110/138 (79.71%), Query Frame = 3 Query: 51 MRVSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPV--TPLSSESAL-------QAGDIRHVSKD 437 MR+SCNGCRVLRKGC ++C+IRPCLQWIKS QANATLFLAKFYGRAGL+NLI +GP LRPAIF+SLLYEACGRIVNP+ GSVGLMWSG W CQAAV+AV G P+ TPL S SA + DIRHV+KD Sbjct: 1 MRISCNGCRVLRKGCNQDCTIRPCLQWIKSADSQANATLFLAKFYGRAGLLNLIESGPDHLRPAIFRSLLYEACGRIVNPVDGSVGLMWSGNWAQCQAAVDAVLNGLPITHTPLPSASASHQIIPPHRTYDIRHVAKD 138
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD38_ARATH (LOB domain-containing protein 38 OS=Arabidopsis thaliana GN=LBD38 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 3.927e-40 Identity = 70/110 (63.64%), Postives = 93/110 (84.55%), Query Frame = 3 Query: 57 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 386 +SCNGCRVLRKGC ENC +RPC+QWI+SP+ Q +AT+F+AKF+GRAGL++ I+A P+ PA+F+SLLYEACGR VNP+ G+VGL+W+G W++CQAAVE V RG + P+ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFVAKFFGRAGLMSFISAVPESQCPALFQSLLYEACGRTVNPVNGAVGLLWTGNWNVCQAAVETVLRGGSLKPI 110
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD37_ARATH (LOB domain-containing protein 37 OS=Arabidopsis thaliana GN=LBD37 PE=2 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 4.341e-39 Identity = 67/110 (60.91%), Postives = 91/110 (82.73%), Query Frame = 3 Query: 57 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPL 386 +SCNGCRVLRKGC ENC +RPC+QWI++ Q +AT+F+AKF+GRAGL++ I+A P RPA+F+SLLYEACGR VNP+ G++G++W+G W++CQAAVE V RG + P+ Sbjct: 1 MSCNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFVAKFFGRAGLMSFISAVPDSQRPALFQSLLYEACGRTVNPVNGAIGMLWTGNWNICQAAVETVLRGGSLRPI 110
BLAST of DY270864 vs. ExPASy Swiss-Prot
Match: LBD39_ARATH (LOB domain-containing protein 39 OS=Arabidopsis thaliana GN=LBD39 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 2.155e-38 Identity = 68/111 (61.26%), Postives = 92/111 (82.88%), Query Frame = 3 Query: 57 VSCNGCRVLRKGCGENCSIRPCLQWIKSPQCQANATLFLAKFYGRAGLVNLINAGPQDLRPAIFKSLLYEACGRIVNPIYGSVGLMWSGRWHLCQAAVEAVFRGEPVTPLS 389 +SCNGCRVLRKGC E C +RPCLQWI+S + Q +AT+F+AKF+GRAGL++ I++ P+ RPA+F+SLL+EACGR VNP+ G+VG++W+ WH+CQAAVE V RG + P+S Sbjct: 1 MSCNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFVAKFFGRAGLMSFISSVPELQRPALFQSLLFEACGRTVNPVNGAVGMLWTRNWHVCQAAVETVLRGGTLRPIS 111 The following BLAST results are available for this feature:
BLAST of DY270864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY270864 ID=DY270864; Name=DY270864; organism=Citrus clementina; type=EST; length=1190bpback to top |