DY270878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 1.992e-51 Identity = 107/217 (49.31%), Postives = 139/217 (64.06%), Query Frame = 3 Query: 234 IGISPSVNIKAITTFTQKSTQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL--DGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGK 878 +G+S SV K +++ V A VT + V+ +DD++D+FGK+LLLELVS+ELDPKTG E+ +KGFAH K+G YE+K VP SFG VGA+LVENEHH+EM++ DI L G + + SWV S+ + + R FFT KSYLPSQTP G+ LR +EL LRGDG ERK H+++YDYD +NDLG P R VLG K Sbjct: 57 VGVSTSVTTK------ERALTVTAIVTAQVPTSVYVARGLDDIQDLFGKTLLLELVSSELDPKTGRERERVKGFAHMTL--KEG--TYEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGIEALRKKELETLRGDGHSERKFHERVYDYDTYNDLGDPDKNIDHKRPVLGTK 263 HSP 2 Score: 30.4166 bits (67), Expect = 1.992e-51 Identity = 15/55 (27.27%), Postives = 25/55 (45.45%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPRT*FITLQEIKHSPKISNQIFPPSLCTRGLQGFV 1047 PYP+RCRTG P +P E R+ + + + + + F + GL + Sbjct: 266 PYPRRCRTGRPKTLYDPETETRSSPVYVPRDEQFSDVKGRTFSATTLRSGLHAIL 320
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 188.734 bits (478), Expect = 9.767e-51 Identity = 102/204 (50.00%), Postives = 133/204 (65.20%), Query Frame = 3 Query: 288 STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL---DGPRNGPV-NITCGSWVQSEHVNKQ----KRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGG 875 + +VKA TIK +VG L++ +D ++D+ G+SL LELVS+ELD KTG EK T++ +AH +D + YE+ F+VP FG +GAI+V NE +EM+L DI L DG N V I C SWVQ + V + KRIFF NK+YLP QTP GL R +L RGDG GER+ D++YDYDV+NDLG P +AR VLGG Sbjct: 83 AVRVKAVATIKVTVGELINRSID-IRDLIGRSLSLELVSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGLRSYRKNDLQQKRGDGTGEREADDRVYDYDVYNDLGNPDSNGDLARPVLGG 285 HSP 2 Score: 34.2686 bits (77), Expect = 9.767e-51 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPR 948 PYP+RCRTG PP ++P E R Sbjct: 290 PYPRRCRTGRPPSKKDPKSETR 311
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 3.000e-46 Identity = 96/207 (46.38%), Postives = 132/207 (63.77%), Query Frame = 3 Query: 294 QVKAFVTIKPSVGGLVSGF-----VDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL---DGPRNGPV-NITCGSWVQS----EHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGG 875 +VKA TIK +V GL++ +D+++D+ G+SL LELVS+EL+ KTG +K T+ +AH+ +D G + YE+ F+VP FG +GA++V NE +EM+L D+ L DG N V I C SWVQ + KRIFF K+YLP QTP GL R E+L RG+G G+R+ D++YDYDV+NDLG P +AR VLGG Sbjct: 97 KVKAVATIKVTVEGLLNSLRPSKAIDNIRDLIGRSLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGLRSYREEDLKQKRGNGAGQREADDRVYDYDVYNDLGNPDSNGDLARPVLGG 302 HSP 2 Score: 34.2686 bits (77), Expect = 3.000e-46 Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPR 948 PYP+RCRTG PP ++P E R Sbjct: 307 PYPRRCRTGRPPSKKDPKSETR 328
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 165.622 bits (418), Expect = 1.726e-43 Identity = 100/257 (38.91%), Postives = 148/257 (57.59%), Query Frame = 3 Query: 156 PFLRGNFHAFRALQSSSSIKNIPKIRIGISPSVNIKAITTFTQK----STQVKAFVTI----KPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKP------TIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRN--GPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGK 878 P L G H R + ++ + +P R+ SPS IK ++ ++A +T+ K + V+G +D + DM G++++LEL+S ++ P+T +KP +IK + + G D H++Y ++F V FGE GAI V N H++E +L IV++G GPV+ C SWVQS KR+FF+NK YLPS+TP GL LR +EL +LRGDG G RK D+IYDY +NDLG P + R +LGG+ Sbjct: 31 PLLPGERHGRRKVVVAAISEEVP--RLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHLDALWDMVGRNVVLELISTKIHPRT--KKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIRPILGGE 282 HSP 2 Score: 33.113 bits (74), Expect = 1.726e-43 Identity = 14/24 (58.33%), Postives = 15/24 (62.50%), Query Frame = 1 Query: 877 KTPYPKRCRTGSPPCGENPGFEPR 948 K PYP+RCRTG PP N E R Sbjct: 283 KIPYPRRCRTGRPPTDTNMLAESR 306
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.192e-41 Identity = 93/200 (46.50%), Postives = 117/200 (58.50%), Query Frame = 3 Query: 288 STQVKAFVTIKPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL--DGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVP-GFLFQVARRVLGGK 878 +T++KA VT+ S V F+ D+ + L ++LVS+ELDP+TG E+ I G +G D +YE+ F+VP SFG +GA+ V N HH EM L DI + G V C SW+ H KR+FF SYLPSQTP G+ LR EL LRG G GERK HD+IYDYDV+NDLG P R VLGGK Sbjct: 85 ATEMKATVTVHMSKAAGVRDFLYDL--ILKTWLHVDLVSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGVEGLRKRELEILRGTGCGERKEHDRIYDYDVYNDLGNPDDDNNPTTRPVLGGK 282 HSP 2 Score: 30.8018 bits (68), Expect = 1.192e-41 Identity = 12/23 (52.17%), Postives = 16/23 (69.57%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPRT 951 PYP+RCRTG P ++P E R+ Sbjct: 285 PYPRRCRTGRPRSKKDPFSEERS 307
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 5.836e-41 Identity = 83/179 (46.37%), Postives = 113/179 (63.13%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKD---GHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGK 878 +D + D G+S+LLELVS E DP+ G K + + KD ++Y ++F V FGE GA+ V N H +E Y+ IV++G GP + TC SWVQ V++ +R+FF+N+ YLPS+TP GL LR EL +LRGDG GER+ D++YDYDV+NDLG P AR VLGG+ Sbjct: 90 LDALADRVGRSVLLELVSTETDPRKGTPKKSKPSALVGWFDKKDVKAERVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGLRELRLRELADLRGDGTGERRITDRVYDYDVYNDLGNPDKGVASARPVLGGE 268 HSP 2 Score: 25.0238 bits (53), Expect = 5.836e-41 Identity = 10/22 (45.45%), Postives = 12/22 (54.55%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPR 948 PYP+R RTG P + E R Sbjct: 271 PYPRRMRTGRPSTATDASAESR 292
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 2.191e-40 Identity = 82/180 (45.56%), Postives = 119/180 (66.11%), Query Frame = 3 Query: 351 VDDVKDMFGKSLLLELVSAELDPKTGAEKPT----IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGK 878 +D D G++++LEL+S ++DPKT K + +K ++ ++ K + Y ++F V +FG GAI V N+H KE +L I ++G GPV+ C SWVQS+ + KRI FTN+ YLPS+TP+GL LR +EL NLRG+G+GERK D+IYDYDV+ND+G P ++AR LGG+ Sbjct: 114 LDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNS-KAERVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELARPTLGGR 292 HSP 2 Score: 25.0238 bits (53), Expect = 2.191e-40 Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 1 Query: 883 PYPKRCRTG 909 PYP+RCRTG Sbjct: 295 PYPRRCRTG 303
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.191e-40 Identity = 88/203 (43.35%), Postives = 129/203 (63.55%), Query Frame = 3 Query: 294 QVKAFVTI----KPSVGGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPT----IKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGK 878 +V+A VT+ K + + +D D G++++LEL+S +LDPKT K + +K ++ ++ + K + Y ++F V +FG GAI V N+H KE +L I ++G GPV+ C SWVQS+ + KRIFFTN+ YLP++TP+GL LR +EL NLRGDG G RK D+IYD+DV+NDLG P +++R LGGK Sbjct: 85 KVRAVVTVRNKNKEDLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKS-KTKAERVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSELSRPKLGGK 286 HSP 2 Score: 25.409 bits (54), Expect = 2.191e-40 Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1 Query: 877 KTPYPKRCRTG 909 + PYP+RCRTG Sbjct: 287 EVPYPRRCRTG 297
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 7.973e-37 Identity = 81/202 (40.10%), Postives = 126/202 (62.38%), Query Frame = 3 Query: 285 KSTQVKAFVTIKPSV--GGLVSGFVDDVKDMFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVLDGPRNGPVNITCGSWVQSEHVNKQKRIFFTNKSYLPSQTPNGLTRLRAEELLNLRGDGQ---GERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGG 875 ++ +VK ++T + G S +DD+ D+ G+SLL+EL+SA+ D ++ T++ +A R + YE +FE+P FG VGAI ++N++H++++L + L P G + TC SWV + V+ KRIFF++KSYLPSQTP L + R EEL L+G + GE ++IYDYDV+ND+G P ++AR V+GG Sbjct: 71 QNIKVKGYITAQEEFLEGITWSRGLDDIADIRGRSLLVELISAKTD-----QRITVEDYAQRVWAEAPDEK-YECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELKLP-GGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPLKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGG 265 HSP 2 Score: 33.8834 bits (76), Expect = 7.973e-37 Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 883 PYPKRCRTGSPPCGENPGFEPR 948 PYP+RC+TG PC +P E R Sbjct: 269 PYPRRCKTGRKPCETDPSSEQR 290
BLAST of DY270878 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 7.553e-36 Identity = 122/347 (35.16%), Postives = 168/347 (48.41%), Query Frame = 3 Query: 141 VPLSKPFLRGNFHAFRALQSSSSIKNIPKIRIG----------ISPSVNIKAITTFTQKSTQ--VKAFVTIKPSVGGLVSGF--VDDVKD---------MFGKSLLLELVSAELDPKTGAEKPTIKGFAHRAGEDKDGHIIYESKFEVPPSFGEVGAILVENEHHKEMYLNDIVL-----DGPRNGPVNIT-CGSWVQSEHVNKQKRIFF-TNKSYLPSQTPNGLTRLRAEELLNLRGDGQGERKTHDKIYDYDVFNDLGVPGFLFQVARRVLGGKNTLS*AL*NWKPTLWRKSRLR------TEDLIH-----YFTGNKTFPENKQPNFSPKPLYPGFAGICTFIK 1058 VPLS+ R +F A + S+ N + R+G I VN A+TT + Q +K V +K +V + F D+ K+ + G L LELVS+ELDPKTG E I G + E + + +YE+ F GA+ + N HH EM L ++ + D ++ V + C SW+ H + KR FF KSY+PSQTP G+ +LR EL LRG+G GERK HD+IYDYDV+NDLG P + R VLGGK + P R R R +E+ H Y ++TF E K+ F K L G+CT +K Sbjct: 14 VPLSR---RASFLVAEARRKPST--NARRTRVGSTSTTTTTTTILTDVNGPALTTVAKPGHQYDLKQTVEMKATVSVHMKSFWWSDEKKERARDWAYDLILGSWLTLELVSSELDPKTGQEHDVISGKLKHSRETEKDYDLYEAIFTCRHRLAPSGAVRLVNYHHTEMLLGEVKIFPAGEDPTKSSAVTLFHCQSWIDPSHCSPDKRTFFPVEKSYIPSQTPKGVEKLRKSELEALRGNGCGERKKHDRIYDYDVYNDLGKP----ESKRPVLGGKE-------HPYPRRCRTGRPRSKTDPSSEEESHKKGEMYVPRDETFTERKEQAFLTKQLLSQLHGLCTGLK 344 The following BLAST results are available for this feature:
BLAST of DY270878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270878 ID=DY270878; Name=DY270878; organism=Citrus clementina; type=EST; length=1178bpback to top |