DY271006
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271006 vs. ExPASy Swiss-Prot
Match: PPL1_ARATH (PsbP-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=PPL1 PE=1 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 7.420e-73 Identity = 129/190 (67.89%), Postives = 161/190 (84.74%), Query Frame = 3 Query: 57 GVLPAVCRRGISLIVKAEHASMASSANSLDKCGRRQMIAVGVIAPWVSLVNQTPPSFAAESKKGFLSVTDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGHGKFYTLTTG 626 GV+P+ ++G+S +VKAEH S +SS++ DKC RR ++ GV+APW+SL+++ P SFAAESKKGFL+V+D KD Y+F+YPFGWQEV+IEGQDKV+KDVIEPLESVSVNL+PT KQ I++FGPP+++AETLIKK LAPP QKT +I ASE+DVDGK YY FEFT QA NY RHALG +TV +G FYTLTTG Sbjct: 18 GVIPS-SKKGLSFLVKAEHHSSSSSSHLQDKCQRRLIVTFGVVAPWISLLSRAPLSFAAESKKGFLAVSDNKDAYAFLYPFGWQEVVIEGQDKVYKDVIEPLESVSVNLVPTSKQTIKEFGPPKQIAETLIKKVLAPPNQKTTLIDASEHDVDGKTYYQFEFTVQARNYTRHALGTITVFNGNFYTLTTG 206 HSP 2 Score: 21.1718 bits (43), Expect = 7.420e-73 Identity = 11/25 (44.00%), Postives = 18/25 (72.00%), Query Frame = 1 Query: 625 GANERRWGEDER*IGNSLLNPFKIS 699 GANERRW E + +++++ FKI+ Sbjct: 206 GANERRW-EKMKDRLHTVVDSFKIT 229
BLAST of DY271006 vs. ExPASy Swiss-Prot
Match: PPL2_ARATH (PsbP-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=PPL2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 8.361e-22 Identity = 63/179 (35.20%), Postives = 87/179 (48.60%), Query Frame = 3 Query: 102 KAEHASMASSANSLDKCGRRQ-MIAVGVIAPWVSLVNQTPPS---FAAESKKGFLSVTDKKDGYSFVYPFGWQEVIIEGQDKVFKDVIEPLESVSVNLIPTGKQDIRDFGPPQEVAETLIKKFLAPPTQKTKIIAASENDVDGKAYYAFEFTAQAPNYIRHALGVVTVGHGKFYTLTTG 626 KA+ + S + RRQ ++ VG +LV + P+ A E K + D++DGYS+ YP W+E D FKD L++V V IPT K DI + GP +EV L+K A P Q I E DGK YY FE+ + P Y + V VG+ ++YTL G Sbjct: 41 KADSSESTYQKGSGNNWKRRQALVGVG------TLVATSIPATLLLAEEIPKSYSPFVDREDGYSYYYPSDWREFDFRAHDSAFKDRYLQLQNVRVRFIPTEKNDIHEVGPMEEVVYDLVKHKFAAPNQVATIYDMKERVEDGKNYYTFEYGLRTPIYATTSFATVAVGNNRYYTLIVG 213 HSP 2 Score: 20.7866 bits (42), Expect = 8.361e-22 Identity = 7/7 (100.00%), Postives = 7/7 (100.00%), Query Frame = 1 Query: 625 GANERRW 645 GANERRW Sbjct: 213 GANERRW 219 The following BLAST results are available for this feature:
BLAST of DY271006 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271006 ID=DY271006; Name=DY271006; organism=Citrus clementina; type=EST; length=1283bpback to top |