DY271058

Overview
NameDY271058
Unique NameDY271058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1230
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: ASPRX_ORYSJ (Aspartic proteinase OS=Oryza sativa subsp. japonica GN=RAP PE=2 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 2.230e-78
Identity = 140/268 (52.24%), Postives = 187/268 (69.78%), Query Frame = 2
Query:   32 EQKLLRSVFCLWVLASCLLLPASSNXXXXXXXXXXXXXXHSLNAARITRKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFG 835
            ++ LL    CLW L+  LLL ASS+                L AA++ ++   +          + G SD D +PL ++++ QY+G IG+GSPPQNF+VIFDTGSSNLWVPS+KCYFSI+CY HSRY S+KS++Y   G++C+I YGSG+ISGFFS+              FIEATRE S+TF++ +FDGI+GLG+ EI+VG A P+W +M EQ L++++VFSFWLNRDPDA  GGE+VFGG+DPK +KG HTYVPV++KG+ QFN G
Sbjct:    3 KRHLLLVTTCLWALSCALLLHASSDGFLRVNLNKKRLDKEDLTAAKLAQQGNRL---------LKTGSSDSDPVPLVDYLNTQYYGVIGLGSPPQNFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYNSKKSSSYKADGETCKITYGSGAISGFFSKDNVLVGDLVVKNQKFIEATRETSVTFIIGKFDGILGLGYPEISVGKAPPIWQSMQEQELLADDVFSFWLNRDPDASSGGELVFGGMDPKHYKGDHTYVPVSRKGYWQFNMG 261          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CYPR1_CYNCA (Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO1 PE=1 SV=2)

HSP 1 Score: 292.738 bits (748), Expect = 2.912e-78
Identity = 142/228 (62.28%), Postives = 169/228 (74.12%), Query Frame = 2
Query:  212 GVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGGCACI 895
            GV     DSD +++ LKN+MDAQYFGEIGIG+PPQ F+VIFDTGSSNLWVPSSKCYFS++C FHS+Y+S  S TY + GKS  I YG+GSISGFFSQ              FIEAT+E  +TFL A+FDGI+GLGF+EI+VGDAVPVW  M+ QGLV E VFSFWLNR+ D +EGGE+VFGGVDP  FKG+HTYVPVT+KG+ QF  G  +  +     F   GCA I
Sbjct:   28 GVRGNFRDSDGELIALKNYMDAQYFGEIGIGTPPQKFTVIFDTGSSNLWVPSSKCYFSVACLFHSKYRSTDSTTYKKNGKSAAIQYGTGSISGFFSQDSVKLGDLLVKEQDFIEATKEPGITFLAAKFDGILGLGFQEISVGDAVPVWYTMLNQGLVQEPVFSFWLNRNADEQEGGELVFGGVDPNHFKGEHTYVPVTQKGYWQFEMGDVLIGD-KTTGFCASGCAAI 254          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: ASPR1_ORYSJ (Aspartic proteinase oryzasin-1 OS=Oryza sativa subsp. japonica GN=Os05g0567100 PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 7.931e-76
Identity = 139/227 (61.23%), Postives = 173/227 (76.21%), Query Frame = 2
Query:  161 AARITRKE--RYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFG 835
            AAR++ +E  R +G  G + +    G  + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+C+FHSRYKS +S+TY + GK   I YG+GSI+GFFS+              FIEAT+E  LTF++A+FDGI+GLGF+EI+VGDAVPVW  MVEQGLVSE VFSFW NR  D  EGGEIVFGG+DP  +KG HTYVPV++KG+ QF  G
Sbjct:   45 AARLSGEEGARRLGLRGANSLGG--GGGEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACFFHSRYKSGQSSTYQKNGKPAAIQYGTGSIAGFFSEDSVTVGDLVVKDQEFIEATKEPGLTFMVAKFDGILGLGFQEISVGDAVPVWYKMVEQGLVSEPVFSFWFNRHSDEGEGGEIVFGGMDPSHYKGNHTYVPVSQKGYWQFEMG 269          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: ASPR_HORVU (Phytepsin OS=Hordeum vulgare PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 5.140e-75
Identity = 136/230 (59.13%), Postives = 172/230 (74.78%), Query Frame = 2
Query:  206 VSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGGCACI 895
            +SG +    + + DI+ LKN+M+AQYFGEIG+G+PPQ F+VIFDTGSSNLWVPS+KCYFSI+CY HSRYK+  S+TY + GK   I YG+GSI+G+FS+              FIEAT+E  +TFL+A+FDGI+GLGF+EI+VG AVPVW  M+EQGLVS+ VFSFWLNR  D  EGGEI+FGG+DPK + G+HTYVPVT+KG+ QF+ G  +    S   F  GGCA I
Sbjct:   59 LSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGGKSTG-FCAGGCAAI 287          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: ASPR_CUCPE (Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 1.145e-74
Identity = 149/283 (52.65%), Postives = 197/283 (69.61%), Query Frame = 2
Query:   59 CLWVLASCLLLPASSNXXXXXXXXXXXXXX-HSLNAARITRKERYMGGAGVSGVHHR--LGDS-DEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGGCACI 895
            CL++L S  ++ ++SN                +  AAR+  K+  +  A     + +  LG+S D DI+ LKN++DAQY+GEI IG+PPQ F+VIFDTGSSNLWV   +C FS++C+FH+RYKS +S++Y + G S  I YG+G++SGFFS               FIEATRE SLTFL+A+FDG++GLGF+EIAVG+AVPVW NMVEQGLV E VFSFWLNR+ + EEGGEIVFGGVDPK ++GKHTYVPVT+KG+ QF+ G ++  +  P  F  GGC+ I
Sbjct:   12 CLFLLVSFNIVSSASNDGLLRVGLKKIKLDPENRLAARVESKDAEILKAAFRKYNPKGNLGESSDTDIVALKNYLDAQYYGEIAIGTPPQKFTVIFDTGSSNLWV-LCECLFSVACHFHARYKSSRSSSYKKNGTSASIRYGTGAVSGFFSYDNVKVGDLVVKEQVFIEATREPSLTFLVAKFDGLLGLGFQEIAVGNAVPVWYNMVEQGLVKEPVFSFWLNRNVEEEEGGEIVFGGVDPKHYRGKHTYVPVTQKGYWQFDMG-DVLIDGEPTGFCDGGCSAI 292          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: ASPP_AEDAE (Lysosomal aspartic protease OS=Aedes aegypti GN=AAEL006169 PE=1 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 3.585e-52
Identity = 102/215 (47.44%), Postives = 137/215 (63.72%), Query Frame = 2
Query:  254 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFS-ISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGGCACI 895
            PL N++DAQY+G I IG+PPQ+F V+FDTGSSNLWVPS +C F+ I+C  H++Y ++KS+T+ + G +  I YGSGS+SG+ S               F EA  E  L F+ A+FDGI+GLG+  I+V   VPV+ NM  QGL+   VFSF+LNRDP A EGGEI+FGG D   + G  TY+ V +K + QF   K  + ++    F   GC  I
Sbjct:   59 PLSNYLDAQYYGAITIGTPPQSFKVVFDTGSSNLWVPSKECSFTNIACLMHNKYNAKKSSTFEKNGTAFHIQYGSGSLSGYLSTDTVGLGGVSVTKQTFAEAINEPGLVFVAAKFDGILGLGYSSISVDGVVPVFYNMFNQGLIDAPVFSFYLNRDPSAAEGGEIIFGGSDSNKYTGDFTYLSVDRKAYWQF---KMDSVKVGDTEFCNNGCEAI 270          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CATD_CHICK (Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 2.324e-51
Identity = 94/190 (49.47%), Postives = 131/190 (68.95%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYF-SISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C+   I+C  H +Y + KS+TY E G    I+YG+GS+SGF SQ              F EA ++  +TF+ A+FDGI+G+ F  I+V    P +DN+++Q L+ + +FSF+LNRDP A+ GGE++ GG DPK + G  ++V VT+K + Q
Sbjct:   70 LKNYMDAQYYGEIGIGTPPQKFTVVFDTGSSNLWVPSVHCHLLDIACLLHHKYDASKSSTYVENGTEFAIHYGTGSLSGFLSQDTVTLGNLKIKNQIFGEAVKQPGITFIAAKFDGILGMAFPRISVDKVTPFFDNVMQQKLIEKNIFSFYLNRDPTAQPGGELLLGGTDPKYYSGDFSWVNVTRKAYWQ 259          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CATD_HUMAN (Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 8.829e-51
Identity = 97/201 (48.26%), Postives = 138/201 (68.66%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX-----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                         F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+L+RDPDA+ GGE++ GG D K +KG  +Y+ VT+K + Q
Sbjct:   71 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCQSASSASALGGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTDSKYYKGSLSYLNVTRKAYWQ 271          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CATD_CANFA (Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 1.506e-50
Identity = 101/224 (45.09%), Postives = 148/224 (66.07%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX---------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGK-NINWEISPQVFGRGGCACI 895
            L+N+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G S +I+YGSGS+SG+ SQ                       F EAT++  +TF+ A+FDGI+G+ +  I+V + +PV+DN+++Q LV + +FSF+LNRDP+A+ GGE++ GG D K +KG  +Y+ VT+K + Q +  + ++    S     +GGC  I
Sbjct:   71 LRNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTSFDIHYGSGSLSGYLSQDTVSVPCKSALSGLAGIKVERQTFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVEKNIFSFYLNRDPNAQPGGELMLGGTDSKYYKGPLSYLNVTRKAYWQVHMEQVDVG---SSLTLCKGGCEAI 291          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CATD_PIG (Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 3.355e-50
Identity = 102/224 (45.54%), Postives = 143/224 (63.84%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKC-YFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXX----------FIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGGCACI 895
            LKN+MDAQY+GEIGIG+PPQ F+V+FDTGSSNLWVPS  C    I+C+ H +Y S KS+TY + G +  I+YGSGS+SG+ S                         F EAT++  LTF+ A+FDGI+G+ +  I+V + VPV+DN+++Q LV +++FSF+LNRDP A+ GGE++ GG+D K +KG   Y  VT+K + Q +  +      S     +GGC  I
Sbjct:    7 LKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSGKSSTYVKNGTTFAIHYGSGSLSGYLSSQDTVSVPCNSALSGVGGIKVERQTFGEATKQPGLTFIAAKFDGILGMAYPRISVNNVVPVFDNLMQQKLVDKDIFSFYLNRDPGAQPGGELMLGGIDSKYYKGSLDYHNVTRKAYWQIHMNQVAVG--SSLTLCKGGCEAI 228          
The following BLAST results are available for this feature:
BLAST of DY271058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
ASPRX_ORYSJ2.230e-7852.24Aspartic proteinase OS=Oryza sativa subsp. japonic... [more]
CYPR1_CYNCA2.912e-7862.28Cyprosin (Fragment) OS=Cynara cardunculus GN=CYPRO... [more]
ASPR1_ORYSJ7.931e-7661.23Aspartic proteinase oryzasin-1 OS=Oryza sativa sub... [more]
ASPR_HORVU5.140e-7559.13Phytepsin OS=Hordeum vulgare PE=1 SV=1[more]
ASPR_CUCPE1.145e-7452.65Aspartic proteinase OS=Cucurbita pepo PE=2 SV=1[more]
ASPP_AEDAE3.585e-5247.44Lysosomal aspartic protease OS=Aedes aegypti GN=AA... [more]
CATD_CHICK2.324e-5149.47Cathepsin D OS=Gallus gallus GN=CTSD PE=1 SV=1[more]
CATD_HUMAN8.829e-5148.26Cathepsin D OS=Homo sapiens GN=CTSD PE=1 SV=1[more]
CATD_CANFA1.506e-5045.09Cathepsin D OS=Canis familiaris GN=CTSD PE=2 SV=1[more]
CATD_PIG3.355e-5045.54Cathepsin D OS=Sus scrofa GN=CTSD PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271058 ID=DY271058; Name=DY271058; organism=Citrus clementina; type=EST; length=1230bp
CAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGT
CAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCC
TCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCA
TAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATATGGGGGGAG
CAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATGAAGATATT
TTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAGATTGGTAT
TGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCA
ATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTC
CATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAAATTGGAAA
ATCCTGTGAAATAAACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTC
AAGACAATGTTGAAGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATT
GAGGCTACACGAGAAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGG
AATAATAGGGCTTGGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTG
TGTGGGACAATATGGTTGAGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCA
TTCTGGCTCAACAGGGATCCAGACGCTGAAGAGGGTGGAGAGATTGTTTT
TGGTGGTGTTGATCCAAAGCCCTTTAAAGGGAAGCATACCTATGTTCCTG
TTACTAAAAAAGGCTTCTGCCAGTTCAATTTTGGGAAAAATATTAATTGG
GAAATCAGTCCACAGGTGTTTGGGAGGGGGGGGTGTGCCTGCATTTGTGG
ACCTCAGGAACACTCCTTACAACCCCGGTCCAACCCCCGGTTGGACCTGA
AATCCATTCCAGCCATTGGGTGGGGAAGGGAGTTTTTTAGTGGCGGGAGT
GAAAACTATTTTTTTTCCCCATATGGGGGGATTTACTTAAGGAAACCCTC
ATATTATACCGGGGTCTTCTACCCTGAAAAAATTAATGTCTACACAAATA
GGGTTTTTTATGCTCTTTCCAGGGGGTCCCCTAAATTGTTTGGCCTATAA
GGGGGATCAACAGAAACCGGCGGCGTTTTCAACGAGAGCAAAAATCTTTA
TTCCAACCCGCCGGGGCATAATGTTGTGGT
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