DY271067

Overview
NameDY271067
Unique NameDY271067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig307 contig Ccv1_Contig307:30..792. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 246.514 bits (628), Expect = 1.180e-64
Identity = 104/162 (64.20%), Postives = 123/162 (75.93%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 486
            GT+L +GV AVGYGTENG DYWIV+NSWG SWGE GY+RMERN+  + +GKCGIA+E SY                       VCDNYY+CP+S TCCC++EYG  C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP
Sbjct:  284 GTALDHGVAAVGYGTENGKDYWIVRNSWGKSWGESGYVRMERNIKAS-SGKCGIAVEPSYPLKKGENPPNPGPTPPSPTPPPTVCDNYYTCPDSTTCCCIYEYGKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.485e-64
Identity = 102/169 (60.36%), Postives = 125/169 (73.96%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 507
            GT L +GV AVGYGTENG DYWIV+NSWG SWGE GY+RM RN+A + +GKCGIA+E SY                        CD+YY+CPESNTCCC+FEYG  CFAWGCCPLEAATCCDD+YSCCPH+YP+C++  GTCL+SK++P  V+AL+R PA P+W+ G +
Sbjct:  292 GTQLDHGVVAVGYGTENGKDYWIVRNSWGKSWGESGYLRMARNIASS-SGKCGIAIEPSYPIKNGENPPNPGPSPPSPIKPPTQCDSYYTCPESNTCCCLFEYGKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.222e-54
Identity = 91/170 (53.53%), Postives = 114/170 (67.06%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 510
            GT++ +GV   GYGTENG DYWIV+NSWG++  E GY+R++RNV+ + +G CG+A+E SY                        CD Y  C    TCCC+ ++  SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R  A+P  A GN G
Sbjct:  173 GTAVDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSS-SGLCGLAIEPSYPVKTGPNPPKPAPSPPSPVKPPTECDEYSQCAVGTTCCCILQFRRSCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.652e-53
Identity = 95/167 (56.89%), Postives = 110/167 (65.87%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXA------VCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 483
            GTSL +GV AVGYGT+NG DYWIV+NSWG  WGE GY+RMERN+  T TGKCGIAM ASY                             VCD+ +SCP  +TCCC F + N C  WGCCP+E ATCC DH SCCP DYP+CN RAGTC  SK++PL V+AL+RT AK
Sbjct:  297 GTSLDHGVVAVGYGTDNGKDYWIVRNSWGPKWGESGYVRMERNINVT-TGKCGIAMMASYPTKSGANPPKPSPTPPTPPTPPPPSAPDHVCDDNFSCPAGSTCCCAFGFRNLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2)

HSP 1 Score: 176.022 bits (445), Expect = 1.959e-43
Identity = 83/168 (49.40%), Postives = 97/168 (57.74%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTE--NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASYXXXXXXXXXXXXXXXXXXXXXXAVCDNYYSCPESNTCCCVFEYGNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 486
            GT+L +GV AVGYGT+   GA YW V+NSWG  WGE GYIRMERNV    TGKCGIAM ASY                        CD Y  CP   TCCC +   N C  WGCCP+E ATCC DH +CCP +YP+CN +A TC  SK++P  +R      R  P +P
Sbjct:  312 GTNLDHGVVAVGYGTDAATGAAYWTVRNSWGPDWGENGYIRMERNVTAR-TGKCGIAMMASYPIKKGPNPKPSPPSPAPSPPQQ--CDRYSKCPAGTTCCCNYGIRNHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 1.784e-20
Identity = 43/60 (71.67%), Postives = 51/60 (85.00%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT+L + V AVGYG+ENG DYWIV+NSWG  WGE GYIRMERN+A + +GKCGIA+EASY
Sbjct:  300 GTNLDHAVVAVGYGSENGVDYWIVRNSWGPRWGEEGYIRMERNLAASKSGKCGIAVEASY 359          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.510e-19
Identity = 43/60 (71.67%), Postives = 52/60 (86.67%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT++ + V AVGYG+ENG DYWIV+NSWG+ WGE GYIRMERNVA + +GKCGIA+EASY
Sbjct:  255 GTNMDHAVVAVGYGSENGVDYWIVRNSWGTRWGEDGYIRMERNVA-SKSGKCGIAIEASY 313          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.197e-16
Identity = 40/60 (66.67%), Postives = 46/60 (76.67%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT+L +GV  VGYGTENG DYWIVKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  299 GTNLNHGVVVVGYGTENGRDYWIVKNSRGDTWGEAGYMKMARNIANP-RGLCGIAMRASY 357          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.482e-16
Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT+L +GV  VGYGTENG DYW+VKNS G +WGE GY++M RN+A    G CGIAM ASY
Sbjct:  292 GTNLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANP-RGLCGIAMRASY 350          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSP_HEMSP (Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN102 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.939e-16
Identity = 40/61 (65.57%), Postives = 45/61 (73.77%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYG-TENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT L +GV  VGYG T +G  YWIVKNSWG  WGE GYIRM+R ++    GKCGIAMEASY
Sbjct:  284 GTELDHGVAIVGYGATRDGTKYWIVKNSWGEEWGESGYIRMQRGISDK-RGKCGIAMEASY 343          
The following BLAST results are available for this feature:
BLAST of DY271067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
ORYA_ORYSJ1.180e-6464.20Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
RD21A_ARATH4.485e-6460.36Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
CYSPL_SOLLC3.222e-5453.53Low-temperature-induced cysteine proteinase (Fragm... [more]
ORYB_ORYSJ4.652e-5356.89Oryzain beta chain OS=Oryza sativa subsp. japonica... [more]
CYSP1_ORYSJ1.959e-4349.40Cysteine protease 1 OS=Oryza sativa subsp. japonic... [more]
GCP1_ARATH1.784e-2071.67Germination-specific cysteine protease 1 OS=Arabid... [more]
CYSP4_BRANA1.510e-1971.67Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
CPR4_ARATH1.197e-1666.67Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
CPR3_ARATH3.482e-1665.00Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CYSP_HEMSP5.939e-1665.57Thiol protease SEN102 OS=Hemerocallis sp. GN=SEN10... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271067 ID=DY271067; Name=DY271067; organism=Citrus clementina; type=EST; length=764bp
GGGACATCTCTGGCTTATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCCGGTGGATGGTTCTGTTAAATATTTATTCGGACGTTGGTTTTGTA
TATAGCGTTGTAAGTTATCTATCCGGCGTGAATCCAAACAATGCACCAAC
CAATTTGTTGTTAT
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