DY271087

Overview
NameDY271087
Unique NameDY271087
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1068
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271087 vs. ExPASy Swiss-Prot
Match: RHA2B_ARATH (RING-H2 zinc finger protein RHA2b OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.477e-11
Identity = 31/75 (41.33%), Postives = 45/75 (60.00%), Query Frame = 3 
Query:  528 LSYVEEFRNQNPAIKYETLLHCEDAEHDCSVCLTEFEPQSDINNLSCGHLFHKVCLEKWLDYLNVTCPLCRTPLI 752
            LS + +  N N    Y    + ++A  DC VCL++ +   ++  L C H+FHK CLE WL +LN  CPLCR+PL+
Sbjct:   49 LSVLADQLNLNRLFSYR---YSDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLL 120
The following BLAST results are available for this feature:
BLAST of DY271087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RHA2B_ARATH1.477e-1141.33RING-H2 zinc finger protein RHA2b OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YM19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271087 ID=DY271087; Name=DY271087; organism=Citrus clementina; type=EST; length=1068bp
CAAAACGTTAAACAATTACTTGCACATGAGATAGTGTTCTTAGTCTTTTA
GATAGACTAAGAAATTTCAGCTCGTCCTAATCTTATTAAACGGTTCCTGA
TATTTCATCATCGACCCCAACTTTGGGTTGGAATTGCTATCTTCTTTTGG
CTCTTTTTCAGGATTCTGCAGTCATCATTTTTCCTTTTTAAAAATTTTCG
CTTCTCAGATATCAAGGAAGCAGTCACAAGATTTTGCTTGATTTCTGATT
CAGTATCTCAAATTTAGTACAAAATTGGGTATCTGTAAATTTAAAATTTT
AATTCGAAAACATGGGCCTCGCTAGTATGCCGTCCGCATCAGAAGGAATG
CTATGCTTGATTCTAATGAACACTGCTATGTCAATCTCAATCGTCAAAGG
CATATTCAGATCAATCCTCAAGGTTGTCGGTTTCCAGCTTGCTGACTCAT
CATCGCCACCGTATTCATATTTCGCATCACCTCAAGTTGTCTCCGCAGAG
CCATATGATGTAAATTTAAGTCCTCCCCTTAGCTATGTTGAGGAGTTCCG
AAACCAGAACCCTGCAATCAAGTATGAAACATTGCTCCATTGTGAAGATG
CAGAGCATGACTGTTCTGTGTGTTTGACCGAGTTTGAGCCTCAATCTGAT
ATCAATAACTTGTCTTGTGGACATTTGTTTCATAAAGTGTGCTTGGAGAA
GTGGCTGGACTATTTGAATGTTACGTGCCCGCTTTGCAGGACACCTCTAA
TTTCCTGAGTTTGAAGACGATCCCCTCTGCTTCTGGGGAAAATGTTTTAT
GAACTTGTCTAGTTGAGGAGACTTCCATGTTCAGCATGTAGTGTAAAGGT
ATTTACTAATGCCTCGGCCGGAATGTAGTGTTGTTTACCCCCCTTCCATG
TGTGAGTTTAATTTCCAGTCCTTTTGAAGGGTTGGTGAAGAAAACCAAAT
TTTGGTTGTAATATTTGGAAGGTTTTTGGGTTTTTTTTAGGCAAAAAAAC
CTGAAATTTTTAACCTCACGCTTTTCTTTTTAAGGTTTATATTAGTGGAA
TTTGGGTTTTCCCATTTT
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