DY271089

Overview
NameDY271089
Unique NameDY271089
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1127
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271089 vs. ExPASy Swiss-Prot
Match: DRL29_ARATH (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 1.621e-56
Identity = 128/264 (48.48%), Postives = 171/264 (64.77%), Query Frame = 1
Query:   94 MAVTDLFAGEIAAELLKMLISICRRSSLCKSSAEQLRTTIEQLLPTIHEIKYSGVELPPIRQTQLDRLSETLKDGIELSSKVLASTRWNVYKNLQLARKMEKLEKKVSRFLNGPMQAHVLADVHHMRFETAERFDRMEGSARRLEQRLGAMRIGVGGGGWVDEAVKRVE-MEEDTLAEGGLGNLMGIGMALGKNKVKEMVIGRDDLSVLGICGIGGSGKPLLLLRFAKIIR*QVTSTTGILFLTVSPSPNGEQLRGKVWGLCTG 882
            MA+TD FAGEIA ELLK L +I   +   K++A+QL T I+ + PTI EI+YSGVELP  RQ Q+  L +TL+ G +L+ KVL+S RWN+Y+ L LARKMEKLEK +S FL   +  H+LADVHH+R +T+ R DR++ S  R+ Q++G+M+I  GGGG + EA+KR E ME +T  +       G+G+ LGK KVK+M+       V GI G+GG GK  L     +    Q      ILFLTVS SP  E+LR  +WG  +G
Sbjct:    1 MAITDFFAGEIATELLKQLFTISTTAWRYKNTAKQLLTLIDSIRPTIKEIQYSGVELPAHRQAQIGMLFDTLEKGKKLTDKVLSSKRWNLYRQLTLARKMEKLEKTISNFLKNEVFTHILADVHHLRADTSVRLDRVDMSLDRVIQQVGSMKI--GGGGLISEAMKRAEAMEIETNDD---SEKFGVGLELGKVKVKKMMF-ESQGGVFGISGMGGVGKTTLAKELQRDHEVQCHFENRILFLTVSQSPLLEELRELIWGFLSG 258          
BLAST of DY271089 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 7.295e-49
Identity = 111/261 (42.53%), Postives = 158/261 (60.54%), Query Frame = 1
Query:  100 VTDLFAGEIAAELLKMLISICRRSSLCKSSAEQLRTTIEQLLPTIHEIKYSGVELPPIRQTQLDRLSETLKDGIELSSKVLASTRWNVYKNLQLARKMEKLEKKVSRFLNGPMQAHVLADVHHMRFETAERFDRMEGSARRLEQRLGAMRIGVGGGGWVDEAVKRVEMEEDTLAEGGLGNLMGIGMALGKNKVKEMVI-GRDDLSVLGICGIGGSGKPLLLLRFAKIIR*QVTSTTGILFLTVSPSPNGEQLRGKVWGLCT 879
            + D+  GE+  EL++ L ++ +++  C+  A+ L T I+ L PTI EI+YSGVEL P RQ QL   SETL    +L+ KVL S+RWN+ + L   RKME L+ KVS FLNG +  HVLADVHH+R ++  RFDR++     L ++LG+M++   G   + EA+K  E   + +   G    +G+G+ LGK KVKEM+    D   ++GI G+ GSGK  L    A+    +      +LFLTVS SPN E+LR  +WG  T
Sbjct:    1 MADIIGGEVVTELVRQLYAVSQKTLRCRGIAKNLATMIDGLQPTIKEIQYSGVELTPHRQAQLRMFSETLDKCRKLTEKVLKSSRWNMVRQLLHVRKMENLQSKVSSFLNGQLLVHVLADVHHVRADSEFRFDRIDRKVDSLNEKLGSMKL--RGSESLREALKTAEATVEMVTTDGAD--LGVGLDLGKRKVKEMLFKSIDGERLIGISGMSGSGKTTLAKELARDEEVRGHFGNKVLFLTVSQSPNLEELRAHIWGFLT 257          
BLAST of DY271089 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2)

HSP 1 Score: 135.576 bits (340), Expect = 5.252e-31
Identity = 95/249 (38.15%), Postives = 133/249 (53.41%), Query Frame = 1
Query:  106 DLFAGEIAAELLKMLISICRRSSLCKSSAEQLRTTIEQLLPTIHEIKYSGVELPPIRQTQLDRLSETLKDGIELSSKVLASTRWNVYKNLQLARKMEKLEKKVSRFLNGPMQAHVLADVHHMRFETAERFDRMEGSARRLEQRLGAMRIGVGGGGWVDEAVKRVEMEEDTLAEGGLGNLMGIGMALGKNKVKEMVIGRDDLSVLGICGIGGSGKPLLLLRFAKIIR*QVTSTTGILFLTVSPSPNGEQL 852
            DLFAG+I  +LLK+L  +      CK  AE+L T I  + PTI EI+YSG EL    QTQL    E L+   +L  KVL   RWN+ K++  A KM+ LEK++SRFLN  +   VLA+V H+R    +R +R     R L +R  ++            +     ME +T+++  +  +    + LGK KVKEM+    D  + GI G+ GSGK  L +  +K    +      +LFLTVS SPN E L
Sbjct:    6 DLFAGDITTQLLKLLALVANTVYSCKGIAERLITMIRDVQPTIREIQYSGAELSNHHQTQLGVFYEILEKARKLCEKVLRCNRWNL-KHVYHANKMKDLEKQISRFLNSQILLFVLAEVCHLRV-NGDRIER--NMDRLLTERNDSL------------SFPETMMEIETVSDPEIQTV----LELGKKKVKEMMFKFTDTHLFGISGMSGSGKTTLAIELSKDDDVRGLFKNKVLFLTVSRSPNFENL 234          
The following BLAST results are available for this feature:
BLAST of DY271089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
DRL29_ARATH1.621e-5648.48Probable disease resistance protein At4g33300 OS=A... [more]
DRL30_ARATH7.295e-4942.53Probable disease resistance protein At5g04720 OS=A... [more]
ADR1_ARATH5.252e-3138.15Disease resistance protein ADR1 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP8YM21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271089 ID=DY271089; Name=DY271089; organism=Citrus clementina; type=EST; length=1127bp
CTAATTTCCAATATTTGTGAAAAGCCCTCTTGGGCCACCTTTTTCTCGCT
AACCACTTAGCCAGTTAGCCAAAGACAACAGTCACCACCAACCATGGCGG
TAACTGACTTATTCGCCGGCGAGATCGCCGCCGAGCTACTAAAGATGCTA
ATATCAATATGCCGGCGATCCAGTCTCTGTAAATCGAGTGCAGAGCAGCT
GAGGACAACCATAGAACAGCTTCTCCCTACCATTCATGAAATCAAATACT
CCGGCGTTGAACTCCCGCCCATACGCCAGACTCAGCTGGACCGCTTGTCA
GAGACTCTCAAAGACGGCATAGAATTGTCCAGCAAGGTTCTTGCTTCAAC
ACGTTGGAACGTGTACAAGAACTTGCAGCTAGCGAGAAAGATGGAGAAGT
TGGAAAAGAAAGTTTCAAGATTCTTAAACGGCCCCATGCAAGCCCATGTA
TTAGCTGACGTTCATCATATGAGGTTCGAAACAGCTGAGAGGTTTGATCG
GATGGAGGGCTCGGCTAGAAGGCTCGAGCAGCGACTCGGGGCGATGAGAA
TTGGAGTTGGAGGCGGAGGCTGGGTGGATGAGGCCGTTAAGAGAGTTGAA
ATGGAGGAGGATACATTGGCGGAGGGTGGTTTAGGAAATTTGATGGGTAT
CGGGATGGCTTTAGGAAAAAACAAAGTTAAAGAAATGGTTATCGGGAGGG
ATGATTTGAGCGTTCTTGGGATTTGTGGGATTGGCGGCTCTGGAAAACCA
CTCTTGCTCTTGAGGTTTGCAAAGATCATCAGGTGACAAGTTACTTCCAC
AACAGGAATTTTGTTCTTGACAGTATCACCATCCCCAAATGGGGAGCAAT
TGAGGGGCAAAGTTTGGGGCCTTTGTACTGGGTTGGGAAACCAGGGAACC
TAATTTAGTGATTTCCCCATGGAAATCTCAAAAATTCATCAAAATTAAGA
AGTCCGGTGTTTGGGTTTGGTTAAAAAAAAGTGGGGGCTCATTGGGCGGG
CCGGGGAAAAACCTAAATTTTTTCAGGGTCCCCTGGGGGGTAAAAAACAC
TTGTGGGGGTTTTCACGGTTTTAAAGTTTTTTTTACAACCCTTTTTCTCC
AAAAAAATAATTTTTAAGAAAAATTTT
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