DY271109

Overview
NameDY271109
Unique NameDY271109
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1121
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana GN=HSFB2A PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 5.529e-57
Identity = 112/196 (57.14%), Postives = 142/196 (72.45%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIVSPSNSGEE----QVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNIFSL 841
            QRS+PTPFLTKT+ LV+D +IDDVISWN+DG++F+VWNPT FA+DLLP++FKHNNFSSFVRQLNTYGFKKVVPDRWEFSND F+RGE++LLREIQRRKI +                    +VSPSNSGE+    QV+                T G G    E++EEN+KLR +N QLN+++ +MK++C+NI+SL
Sbjct:   17 QRSIPTPFLTKTFNLVEDSSIDDVISWNEDGSSFIVWNPTDFAKDLLPKHFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDFFKRGEKRLLREIQRRKITTTHQTVVAPSSEQRNQTM---VVSPSNSGEDNNNNQVMSSSPSSWYCH---QTKTTGNGGLSVELLEENEKLRSQNIQLNRELTQMKSICDNIYSL 206          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.779e-55
Identity = 114/210 (54.29%), Postives = 138/210 (65.71%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQ---------SXXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQVIXXXXXXXXXXXXVTAHTCGGG-------HTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNIFSLEA 847
            QRS+PTPFLTKTYQLV+D   D++ISWN+DGTTF+VW P  FARDLLP+YFKHNNFSSFVRQLNTYGF+KVVPDRWEFSNDCF+RGE+ LLR+IQRRKI          +                    IVSPSNSGEEQVI            +     GG         T  E+VEEN++LRK+N +L K++ ++K L  NI++L A
Sbjct:   53 QRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRKISQPAMAAAAAAAAAAVAASAVTVAAVPVVAHIVSPSNSGEEQVISSNSSPAAAAAAIGGVVGGGSLQRTTSCTTAPELVEENERLRKDNERLRKEMTKLKGLYANIYTLMA 262          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 2.568e-54
Identity = 110/199 (55.28%), Postives = 135/199 (67.84%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIV-----SPSNSGEEQVIXXXXXXXXXXXXVTA--HTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNIFSL 841
            QR++PTPFLTKTYQLVDD A+DDVISWN DG+TFVVW P  FARDLLP+YFKHNNFSSFVRQLNTYGF+K+VPDRWEF+NDCFRRGE++LL EI RRK+ +                   P+      SP  SGEEQVI              A   +  GG    ++ +EN++LR+ENAQL +++ +M+ LCNNI  L
Sbjct:   42 QRTVPTPFLTKTYQLVDDPAVDDVISWNDDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGERRLLCEIHRRKV-TPPAPAATTAAVAAAIPMALPVTTTRDGSPVLSGEEQVISSSSSPEPPLVLPQAPSGSGSGGVASGDVGDENERLRRENAQLARELSQMRKLCNNILLL 239          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica GN=HSFB2C PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.409e-52
Identity = 108/218 (49.54%), Postives = 137/218 (62.84%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKI-----------------QSXXXXXXXXXXXXXXXXXXKPIV---SPSNSGEEQVIXXXXXXXXXXXXVTAHTC------GGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNIFSL 841
            QRS+PTPFLTKTYQLV+D A+DDVISWN+DG+TFVVW P  FARDLLP+YFKHNNFSSFVRQLNTYGF+K+VPDRWEF+NDCFRRGE++LL +I RRK+                  +                   P+    SP++S EEQV+             +          GG  +  ++ EEN++LR+ENA+L +++G MK LCNNI  L
Sbjct:   32 QRSLPTPFLTKTYQLVEDPAVDDVISWNEDGSTFVVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANDCFRRGEKRLLCDIHRRKVVAAAAAAPPPPSPGMATAAAAVASGAVTVAAAPIPMALPVTRAGSPAHSSEEQVLSSNSGSGEEHRQASGSGSAPGGGGGGSASGGDMGEENERLRRENARLTRELGHMKKLCNNILLL 249          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum GN=HSF24 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 6.562e-42
Identity = 88/189 (46.56%), Postives = 118/189 (62.43%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNI 832
            QR+ P PFL KTYQLVDD A DDVISWN+ GTTFVVW    FA+DLLP+YFKHNNFSSFVRQLNTYGF+K+VPD+WEF+N+ F+RG+++LL  I+RRK  +                      SP NSG++ +              +  T G      ++ +EN+KL+K+N  L+ ++ + K  CN +
Sbjct:    3 QRTAPAPFLLKTYQLVDDAATDDVISWNEIGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANENFKRGQKELLTAIRRRKTVTSTPAGGKSVAAGAS-------ASPDNSGDD-IGSSSTSSPDSKNPGSVDTPGKLSQFTDLSDENEKLKKDNQMLSSELVQAKKQCNEL 183          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 9.475e-41
Identity = 89/184 (48.37%), Postives = 112/184 (60.87%), Query Frame = 2
Query:  284 PFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIVS-PSNSGEEQVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNI 832
            PFLTKTY +V+D + D+ ISWN  GT FVVW P  FARDLLP++FKH+NFSSFVRQLNTYGFKKVV DRWEF+NDCFRRGE+ LL  IQRRK                      PI S P++SG E  +                  G     AE+ EEN +LR+ENA+L +++   + +C+ +
Sbjct:   10 PFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRKGSGTGGAGAAPAGGIPTAI---PISSPPTSSGGEPAV-----SSSPPRGAAGIAAGVSGAVAELEEENARLRRENARLARELARARRVCDGV 185          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFB4_ARATH (Heat stress transcription factor B-4 OS=Arabidopsis thaliana GN=HSFB4 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 3.981e-39
Identity = 87/196 (44.39%), Postives = 108/196 (55.10%), Query Frame = 2
Query:  269 RSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQS--------XXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNI 832
            +++P PFLTKTYQLVDD A D V+SW  D TTFVVW P  FARDLLP YFKHNNFSSFVRQLNTYGF+K+VPDRWEF+N+ F+RGE+ LL EI RRK                              P+  P  +  E+              V             + E+N++LR+ N  L  ++  MK L N+I
Sbjct:   29 KAVPAPFLTKTYQLVDDPATDHVVSWGDDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKRGEKHLLCEIHRRKTSQMIPQQHSPFMSHHHAPPQIPFSGGSFFPLPPPRVTTPEEDHYWCDDSPPSRPRVIPQQIDTAAQVTALSEDNERLRRSNTVLMSELAHMKKLYNDI 224          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 8.869e-39
Identity = 83/183 (45.36%), Postives = 111/183 (60.66%), Query Frame = 2
Query:  266 QRSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMK 814
            QRS+P PFL+KTYQLVDD + DDV+SWN++GT FVVW    FA+DLLP+YFKHNNFSSF+RQLNTYGF+K VPD+WEF+ND FRRG + LL +I+RRK                      P  S S  G++                + +     +  A++  EN+KL++EN  L+ ++   K
Sbjct:    8 QRSVPAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRK-------SVIASTAGKCVVVGSPSESNSGGGDDH-----GSSSTSSPGSSKNPGSVENMVADLSGENEKLKRENNNLSSELAAAK 178          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB4D_ORYSJ (Heat stress transcription factor B-4d OS=Oryza sativa subsp. japonica GN=HSFB4D PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.513e-38
Identity = 85/189 (44.97%), Postives = 106/189 (56.08%), Query Frame = 2
Query:  278 PTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRKIQSXXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQV----IXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNI 832
            P PFL+KTYQLVDD + DDV+SW +D  TFVVW P  FARDLLP YFKHNNFSSFVRQLNTYGF+K+V DRWEF+N+ FR+G + LL EI RRK  S                       P+      V                    +  GGG   A + E+N +LR+ N+ L  ++  M+ L N+I
Sbjct:   34 PAPFLSKTYQLVDDPSTDDVVSWGEDEATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQHYPLSLFSPPTTPRSPPVGAAAAAAYHFQEEYCSSPADYAGGGGDLLAALSEDNRQLRRRNSLLLSELAHMRKLYNDI 222          
BLAST of DY271109 vs. ExPASy Swiss-Prot
Match: HFB4B_ORYSJ (Heat stress transcription factor B-4b OS=Oryza sativa subsp. japonica GN=HSFB4B PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.976e-38
Identity = 85/189 (44.97%), Postives = 107/189 (56.61%), Query Frame = 2
Query:  269 RSMPTPFLTKTYQLVDDQAIDDVISWNKDGTTFVVWNPTIFARDLLPRYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNDCFRRGEQQLLREIQRRK-IQSXXXXXXXXXXXXXXXXXXKPIVSPSNSGEEQVIXXXXXXXXXXXXVTAHTCGGGHTCAEIVEENDKLRKENAQLNKQVGEMKNLCNNI 832
            + +P PFLTKTYQLVDD   D ++SW +D TTFVVW P  FARDLLP YFKHNNFSSFVRQLNTYGF+K+V DRWEF+N+ FR+G + LL EI RRK  Q                     +  P  +     +            V      GG   A + E+N +LR+ N+ L  ++  MK L N+I
Sbjct:   29 KPVPAPFLTKTYQLVDDPCTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVADRWEFANEFFRKGAKHLLAEIHRRKSSQPPPPPMPHQPYHHHHHLNPFSLPPPPPAYHHHHLIQEEPATTAHCTVAGDGGEGGDFLAALSEDNRQLRRRNSLLLSELAHMKKLYNDI 217          
The following BLAST results are available for this feature:
BLAST of DY271109 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HFB2A_ARATH5.529e-5757.14Heat stress transcription factor B-2a OS=Arabidops... [more]
HFB2B_ARATH1.779e-5554.29Heat stress transcription factor B-2b OS=Arabidops... [more]
HFB2B_ORYSJ2.568e-5455.28Heat stress transcription factor B-2b OS=Oryza sat... [more]
HFB2C_ORYSJ1.409e-5249.54Heat stress transcription factor B-2c OS=Oryza sat... [more]
HSF24_SOLPE6.562e-4246.56Heat shock factor protein HSF24 OS=Solanum peruvia... [more]
HFB2A_ORYSJ9.475e-4148.37Heat stress transcription factor B-2a OS=Oryza sat... [more]
HSFB4_ARATH3.981e-3944.39Heat stress transcription factor B-4 OS=Arabidopsi... [more]
HSFB1_ARATH8.869e-3945.36Heat stress transcription factor B-1 OS=Arabidopsi... [more]
HFB4D_ORYSJ1.513e-3844.97Heat stress transcription factor B-4d OS=Oryza sat... [more]
HFB4B_ORYSJ1.976e-3844.97Heat stress transcription factor B-4b OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271109 ID=DY271109; Name=DY271109; organism=Citrus clementina; type=EST; length=1121bp
GTTTCGTTTCCTCTTAGCTCGTTCTCTCGCTTCATCTCGTTCCCTCTCCC
TCTTTAACTCCTCATTCCGAAATGACGAACCTTCTAGAATCACCATAACC
AACTTCTCACCTTCACCCTCCCCACAAAGAAAAATTAAAGAATAAAAAAA
ATCTCCCCTTTCAACCTGATTTCAATTACACTTTATCCATATGACTCCGC
CTCCGACGGCAATGGAGCAGAACGGAGACTCTACACCGTCGCCGACGACT
ACGGCCAGCGACTCTCAACGTTCTATGCCGACGCCGTTTTTGACGAAAAC
TTATCAGTTAGTTGACGATCAGGCGATTGACGACGTTATTTCGTGGAACA
AAGACGGAACTACGTTCGTCGTCTGGAATCCTACCATTTTCGCTAGAGAT
TTGCTTCCTAGATACTTCAAACACAACAATTTTTCTAGCTTCGTTCGTCA
ACTCAACACTTATGGGTTTAAAAAAGTTGTACCCGATCGGTGGGAGTTTT
CTAACGACTGCTTCCGCCGTGGCGAGCAACAGCTTCTGCGTGAAATTCAG
CGACGGAAGATTCAATCAGCGGCGACGGCGCAGCCTGTCACCGTTGCGGT
GCCGGCCGTGGTTCCGGTGGCGAAACCGATTGTGTCGCCGTCGAATTCGG
GGGAAGAGCAGGTGATTTCGTCGAACTCATCACCGGCAGCGGGAGCGGCC
GGTGTAACCGCTCACACGTGTGGAGGTGGTCACACGTGTGCGGAGATAGT
TGAAGAGAACGATAAATTGAGGAAGGAGAATGCTCAGCTGAACAAGCAGG
TGGGGGAAATGAAGAATCTCTGTAACAATATATTTAGTTTGGAGGCCAAA
TAACCCCCTGGGTGGTGTTGGGGGGGGGGGACGGCGGGGGGTCAGGGGGC
AAAGGGGATTTTTTTATCCAAAAAAGCTGTTTTCCTGGGGGTGAGGGGAA
AAGGAAAAAGGATATAGAGTTTGTTTTGCGGTTTCCATAAGGGCGGCCAA
ACCCCGCGAGGGGGAAGGGAAATAAGGGGCGCGGGGAAAACCATTTTCCC
CTTCATAAGGGGGGGGAAAAAAACGCACAGCCCTTATTTGTAGTCCCGGT
GATTTTAAAAAGTATACCGTC
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