DY271120

Overview
NameDY271120
Unique NameDY271120
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1163
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_CRYNE (Peptidyl-prolyl cis-trans isomerase B OS=Cryptococcus neoformans GN=CPR2 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.171e-13
Identity = 39/63 (61.90%), Postives = 46/63 (73.02%), Query Frame = -2
Query:   17 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFII-TFKT 202
            +K  M +GGDF K DGT G+SIY  KFPDE+ +LKH  PG+LSM+ A RDT GSQF I T KT
Sbjct:  104 IKNFMIQGGDFTKGDGTGGKSIYGSKFPDENFKLKHTGPGVLSMANAGRDTNGSQFFICTVKT 166          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 1.152e-12
Identity = 36/59 (61.02%), Postives = 44/59 (74.58%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF K DGT G+SIY  KFPDE+ +LKH + GLLSM+ A +DT GSQF IT
Sbjct:   88 IKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFIT 146          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPI2_SYNY3 (Peptidyl-prolyl cis-trans isomerase slr1251 OS=Synechocystis sp. (strain PCC 6803) GN=slr1251 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.152e-12
Identity = 36/56 (64.29%), Postives = 44/56 (78.57%), Query Frame = -2
Query:   23 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITF 190
            MA+GGDF + +GT GESIY  KF DE+ +LKHDRPGLLSM+ A  +T GSQF +TF
Sbjct:   67 MAQGGDFTRGNGTGGESIYGEKFADENFQLKHDRPGLLSMANAGPNTNGSQFFLTF 122          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_YARLI (Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia lipolytica GN=CPR2 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.351e-12
Identity = 36/59 (61.02%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT GESIY  KFPDE+ +LKH +P  LSM+ A RDT GSQF IT
Sbjct:   85 IKNFMIQGGDFTRGDGTGGESIYGRKFPDENFQLKHTKPYKLSMANAGRDTNGSQFFIT 143          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.466e-12
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF K DGT G+SIY  +F DE+ +LKH + GLLSM+ A RDT GSQF IT
Sbjct:   88 IKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFIT 146          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.751e-12
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +KG M +GGDF + DGT GESIY  KF DE+  LKHD+P LLSM+ A   T GSQF IT
Sbjct:   63 IKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFIT 121          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB1_RHIOR (Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus oryzae GN=cyp8 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.751e-12
Identity = 34/59 (57.63%), Postives = 42/59 (71.19%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF   DGT G+SIY  +F DE+ +L+H  PGLLSM+ A RDT GSQF IT
Sbjct:   87 IKKFMIQGGDFTNHDGTGGKSIYGNRFADENFKLRHSTPGLLSMANAGRDTNGSQFFIT 145          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.172e-11
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = -2
Query:   26 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 202
            +K  M +GGDF + DGT G+SIY  KF DE+ +L+H R GLLSM+ A +DT GSQF IT
Sbjct:   89 IKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFIT 147          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 2.172e-11
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = -2
Query:   26 MAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIIT 190
            M +GGDF   +GT G+SIY GKFPDE+ +  HDRPGLLSM+ A  +T GSQF IT
Sbjct:   59 MLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFIT 113          
BLAST of DY271120 vs. ExPASy Swiss-Prot
Match: PPIB_ORPSP (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) GN=CYPB PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.837e-11
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = -2
Query:   17 LKGSMAEGGDFVKRDGTSGESIYEGKFPDESPRLKHDRPGLLSMSIADRDTLGSQFIITFKT 202
            +K  M +GGDF + DGT G+SIY  +F DE+ +L+H  PG+LSM+ A RDT GSQF IT  T
Sbjct:   83 IKDFMIQGGDFTRGDGTGGKSIYGERFADENFKLRHTGPGILSMANAGRDTNGSQFFITTVT 144          
The following BLAST results are available for this feature:
BLAST of DY271120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
PPIB_CRYNE5.171e-1361.90Peptidyl-prolyl cis-trans isomerase B OS=Cryptococ... [more]
PPIB_NEUCR1.152e-1261.02Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPI2_SYNY31.152e-1264.29Peptidyl-prolyl cis-trans isomerase slr1251 OS=Syn... [more]
PPIB_YARLI3.351e-1261.02Peptidyl-prolyl cis-trans isomerase B OS=Yarrowia ... [more]
PPIB_GIBZE7.466e-1259.32Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
PPID_CRYNE9.751e-1261.02Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIB1_RHIOR9.751e-1257.63Peptidyl-prolyl cis-trans isomerase B1 OS=Rhizopus... [more]
PPIB_ASPFU2.172e-1157.63Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
CYPH_YEAST2.172e-1161.82Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
PPIB_ORPSP2.837e-1154.84Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YO14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271120 ID=DY271120; Name=DY271120; organism=Citrus clementina; type=EST; length=1163bp
CTTTAAGGCTAATCATAGTCTTAAAGGTGATGATGAACTGAGAACCTAGT
GTGTCACGATCAGCAATAGACATGGATAAAAGGCCAGGTCTATCATGTTT
TAGCCTCGGTGACTCATCAGGAAATTTCCCCTCATAAATGCTTTCTCCAC
TAGTCCCATCTCTTTTTACAAAGTCACCGCCCTCAGCCATGGAACCTTTA
AGGCTAATCATAGTCTTGACAGGAAGTATGTAGTTTTTGGGGAGCTTGTG
CAAGGACACGAGATACTGAAAAAAATTGAAAATGTTGGCGATGAAGAAGG
GAGACTTACTGTAACAGTGAAGATAATCAATTGTGGTGAAGTTAGCGAGG
ATAAAAAGAAAGGAAATAAATTGAGGGCAGGAAAGGATGCTTCCCTGGAT
GGTGGCAATCATGAAGCACGGAAGAAGGGAAAGCACAAGAAATCTTCAAG
AAATAAGAGGAGGAAGAGAAGACGTTACTCCTCGTCTGATTCAGAGACCT
CTTCAGATTCTGAGACGGAATCATCTGAATCTGATATCGATTCTGACTCG
TACATGTCCTCTTCGTCAGATGTTAGTTCTTCTAGTGATGATAGACGTAA
AAAGAAAAAGAGATCTTCTAAAAGAGACAAACATAGGCGTGGAAAGAGAA
GAGATAGACGCCGGGATAAAAAACGTAAGAGGCGTGATAAGAGATCCAAG
CGCAGATCAAGAAGGTCATCAGATAGTCTCACAGACACTGACAGTGATGG
TAAAAGTGATAGTAGCAGTGAAGATGATGTTCTTCATGTTTGAAGAAAAG
ACCGGAAACAAAAAGAACCTTCTCGGATAGCAGTTGGCAATAAATTCCGC
TCTGGCTGCCAAAGAAGCTGCTTCCTTTCCTGCAAAAAAGGAGGGAGGAA
GAATATGTTTGAAAAAGGAAGAAGGGGAAAAAAACTCCCAGGGGAAAAGG
GGGAACAGCGGGAACCAAGGGGCTTTCTAAGCCGGGTGCCTAAATCTGTG
CAAAATCAAAAAAACCAGCCCGGGAGTGTGGGGGAAAAAAACCTCCCCGG
GCAAAAACCCTAGGAACCCCAAAAACCTTGAAATTCCCTAAAAAAGAAAC
CCTTTTTAATAAAAAAAATTTATAAAAAATTTTTTAATTCCCCCGCGGGG
AGGGGGGCCCCCC
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