DY271186

Overview
NameDY271186
Unique NameDY271186
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length998
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_SALG2 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.766e-30
Identity = 67/177 (37.85%), Postives = 107/177 (60.45%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L+  +T  GL+L S +  +AEI+  +GYD++++D EH P  + D    L A+A   +  ++RL E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   E L ++ QVES+  ++  + I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KEGLREGDTQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTVQDLYHQLQAIAPYASQPVIRLIEGSKALIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPLGQRGVGASVARAARWGRIDNYMAQANESLCLLVQVESKVALENLDAILEVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOSM (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 66/177 (37.29%), Postives = 109/177 (61.58%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G    Y+++  + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAHVNDSLCLLVQVESKTALDNLDEILGVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLI (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12) GN=yfaU PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 67/177 (37.85%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLC (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 67/177 (37.85%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOHS (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O9:H4 (strain HS) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 67/177 (37.85%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECODH (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / DH10B) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 67/177 (37.85%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOBW (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli (strain K12 / BW2952) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 67/177 (37.85%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E      K+ LD+G Q ++ PM+D+ E A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTAYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECO7I (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 4.919e-30
Identity = 66/177 (37.29%), Postives = 108/177 (61.02%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E+  +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEASKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDHLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_ECOLU (2-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=yfaU PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.425e-30
Identity = 66/177 (37.29%), Postives = 107/177 (60.45%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K RL+  E   GL+L S +  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E   +  K+ LD+G Q ++ PM+D+ + A++ VS  R+PP G RG   +V RA+ +G    Y++   + L ++ QVES+  +   ++I  V+G+DGV +GP DL AS+GY
Sbjct:   10 KERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTADQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGY 186
[Close]
BLAST of DY271186 vs. ExPASy Swiss-Prot
Match: KDRA_KLEP7 (2-keto-3-deoxy-L-rhamnonate aldolase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=yfaU PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 8.391e-30
Identity = 70/177 (39.55%), Postives = 106/177 (59.89%), Query Frame = 3 
Query:  312 KYRLQSNETLYGLFLLSFSPTLAEISGLAGYDFVVVDMEHGPGGISDALACLHALAATGTPAILRLPESCPTWAKKALDLGPQGVMFPMIDSPEAAKEAVSYCRFPPSGVRGSAHTVVRASGYGIDXGYLSNYEEELLIMCQVESQEGVQRAEDIAPVDGVDGVQMGPLDLIASMGY 842
            K  L   ET  GL+L S S  +AEI+  +GYD++++D EH P  I D    L A+A   +  ++R  E   +  K+ LD+G + ++ PM+D+ E A+E VS  R+PP G RG    V RA+ +G    Y++   +EL ++ QVES+  ++  + I  VDG+DGV +GP DL AS+GY
Sbjct:   10 KRGLLRGETQIGLWLSSTSSYMAEIAATSGYDWLLIDGEHAPNTIQDLYHQLQAIAPYASQPVIRPVEGNRSLIKQVLDIGARTLLVPMVDTAEQAREVVSATRYPPIGSRGVGAGVARAARWGRVENYMAEANDELCLLIQVESRTALENLDAILEVDGIDGVFIGPADLSASLGY 186
The following BLAST results are available for this feature:
BLAST of DY271186 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
KDRA_SALG23.766e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Salmonella... [more]
KDRA_ECOSM4.919e-3037.292-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLI4.919e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLC4.919e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOHS4.919e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECODH4.919e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOBW4.919e-3037.852-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECO7I4.919e-3037.292-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_ECOLU6.425e-3037.292-keto-3-deoxy-L-rhamnonate aldolase OS=Escherichi... [more]
KDRA_KLEP78.391e-3039.552-keto-3-deoxy-L-rhamnonate aldolase OS=Klebsiella... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YC04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271186 ID=DY271186; Name=DY271186; organism=Citrus clementina; type=EST; length=998bp
TCACTATCAGATAGCCCACCGCCTTCACACTTGACGAAGACGAACTGAGC
GGAACTGAAACTGAGACAATTACAAAAGCAACCATGACCACGCTCACTTG
CTCGGGCTCCGGCACTGCCGCCACTGTCGCCAAGCTTGCACAAAATAAAA
TCAGTTCATTTCCAAAAGCACCCTTGTTCACCCTCAACGGCAACAAATCG
AAAATCGTTTTCCCAAAACTGAAATTGACCCCCTCAGTCTCACGCTCACC
CTCGGATCTGTCGCCAGGCGATCCCCTTTCCCCATCTCCATCACCCTCGC
CCGAATCACTCAAGTATCGCCTCCAAAGCAACGAAACCCTGTACGGACTC
TTCCTCCTCTCTTTCTCCCCAACTCTTGCCGAAATTTCGGGCCTGGCCGG
TTACGATTTCGTCGTCGTAGACATGGAGCACGGCCCTGGCGGCATTTCCG
ATGCTCTCGCTTGCCTTCACGCTCTTGCCGCCACGGGGACGCCGGCCATT
CTGCGGCTCCCTGAAAGTTGCCCAACTTGGGCTAAAAAGGCCCTCGATCT
GGGCCCACAAGGGGTCATGTTCCCTATGATTGACTCCCCAGAAGCCGCCA
AGGAAGCGGTGTCGTATTGCCGGTTCCCGCCTTCTGGAGTGCGGGGATCC
GCTCACACGGTGGTGAGAGCGTCCGGTTACGGGATTGATGANGGATACTT
GAGTAATTACGAGGAGGAGTTGTTGATTATGTGCCAAGTGGAGAGCCAGG
AAGGCGTCCAGCGAGCCGAAGACATCGCGCCGGTTGATGGGGTTGACGGC
GTGCAAATGGGACCGTTGGATTTGATTGCCAGTATGGGGTACTGGGGGAC
CCCGGGCCCAGGAAGGTGAAGGAAAAGATGAGGGTGGCCGAAAAAGGGGT
TTTGGGCGGTGGCAAGGCTAACTTGGGTGGGTTTGCCTAGCCCCTTGAGG
GACCCCCTTGAAAAGAAATCCCGGGGGAACCCCCAGGGGGGCCGGGGG
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