DY271207

Overview
NameDY271207
Unique NameDY271207
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1021
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14388 contig Ccv1_Contig14388:105..1125. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271207 vs. ExPASy Swiss-Prot
Match: MGST3_MOUSE (Microsomal glutathione S-transferase 3 OS=Mus musculus GN=Mgst3 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.576e-23
Identity = 56/131 (42.75%), Postives = 75/131 (57.25%), Query Frame = 2
Query:   77 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRL--TIGKYGFLALLGLMVCT 463
            L  EYG+V L       +   +   VG ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +I+ R  Y  GY TGDP KR    +G     AL+G  VC+
Sbjct:    4 LSKEYGFVLLTGAASFVMVLHLAINVGKARKKYKVEYPVMYSTDPEN--GHMFNCIQRAHQNTLEVYPPFLFFLTVGGVYHPRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLALFALMGTTVCS 132          
BLAST of DY271207 vs. ExPASy Swiss-Prot
Match: MGST3_BOVIN (Microsomal glutathione S-transferase 3 OS=Bos taurus GN=MGST3 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.576e-23
Identity = 59/137 (43.07%), Postives = 79/137 (57.66%), Query Frame = 2
Query:   77 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQL 487
            L  EYG+V L       +   +   V  ARKKYKV YPT+Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P+KR   G   F+AL+GLM  T+      L
Sbjct:    4 LSKEYGFVILTGAASFLMVTHLAINVSKARKKYKVEYPTMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIVSGLGLAWIVGRVLYAYGYYTGEPRKRQR-GALSFIALIGLMGTTVCSAFQHL 137          
BLAST of DY271207 vs. ExPASy Swiss-Prot
Match: MGST3_HUMAN (Microsomal glutathione S-transferase 3 OS=Homo sapiens GN=MGST3 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.742e-22
Identity = 58/137 (42.34%), Postives = 78/137 (56.93%), Query Frame = 2
Query:   77 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKDAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFIVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQL 487
            L  EYG+V L       +   +   V  ARKKYKV YP +Y+ + EN    +FNC+QR HQN+LE+ P F   + VGG+ HP + + LG  +IV R  Y  GY TG+P KR + G  G +ALLGL+  T+      L
Sbjct:    4 LSKEYGFVLLTGAASFIMVAHLAINVSKARKKYKVEYPIMYSTDPEN--GHIFNCIQRAHQNTLEVYPPFLFFLAVGGVYHPRIASGLGLAWIVGRVLYAYGYYTGEPSKR-SRGALGSIALLGLVGTTVCSAFQHL 137          
The following BLAST results are available for this feature:
BLAST of DY271207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGST3_MOUSE1.576e-2342.75Microsomal glutathione S-transferase 3 OS=Mus musc... [more]
MGST3_BOVIN1.576e-2343.07Microsomal glutathione S-transferase 3 OS=Bos taur... [more]
MGST3_HUMAN1.742e-2242.34Microsomal glutathione S-transferase 3 OS=Homo sap... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YD12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271207 ID=DY271207; Name=DY271207; organism=Citrus clementina; type=EST; length=1021bp
GTTCGTTGGTCATCGTTGTCTCTTGGGTGAGATGTTTTCATCGATCGACT
CGACTATGGCGGATGCAACTCAATTTCTGCCAACAGAATACGGATATGTG
GCTCTTGTTCTTGTTTTCTACTGCTTTCTCAATTTCTGGATGGGTTTTCA
AGTTGGCGCTGCCCGCAAGAAGTATAAGGTGCCCTATCCTACCCTCTACG
CTGTAGAATCTGAGAATAAAGATGCTAAGCTCTTTAACTGCGTTCAGAGA
GGGCATCAGAACTCTTTGGAACTTATGCCGGTGTTTTTCATGTTGATGAT
AGTCGGAGGGCTAAAGCATCCATGTGTTTGTGCCGTACTCGGATCCCTTT
TCATTGTCACTCGTTTTTTCTACTTCAAAGGCTATGCTACTGGCGATCCT
CAGAAACGCCTCACTATTGGGAAATATGGATTCTTGGCTTTGCTTGGACT
GATGGTCTGCACAATTTCATTTGGGATCAATCAACTTCGAGGATAAACAC
TTGTAGTTCATCCTTTCTTTTGCATGGGACTCGCTTTCCCTCTACCCACC
TTTTTTATTCTCTATTTCTCTGGTAGCAGTTTTATGTTTTTGTGTTGGTA
GCAAAACTACATGCTGAAATTTTGTCAAACTCCGGTGACATACTCTAATC
ACTTTGCCGCATGGCGCAAGCATAAGCTCATAGTTGACACTGTTGTCTTT
AGAAATCATTGTCATTAAATAACGTGGATTTTGGAATTACCTCGCAAATT
GTTTTGAAACGACTAATTGTCTGGAGGAATTCTTTTTTTTGAAAAAAATG
TTTAGGATTTTCCCTTCTAAAAAAAAAAAAAAAAAAAACCCCCTTTTCTT
GTAAAAATTGGGCATAAAAAAAAGCTTTGTTAAAAATTTTGTGCCACAAA
AAGGGCCCCATCCAACAAAAAAAAAAATTTTTTTTCCCCCCCACCGGGAA
ACCCCCAAAAGGGAACCGTAATTAAGGGGTCAAAGGTGTTTTCGGGGGGC
CCCTGGGCCCCGGTTTTCAAA
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