DY271263

Overview
NameDY271263
Unique NameDY271263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1054
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3870 contig Ccv1_Contig3870:1..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA1_ARATH (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.027e-66
Identity = 92/156 (58.97%), Postives = 108/156 (69.23%), Query Frame = 1
Query:  412 PSFLATFWQACASNPYQDPYYGGMMAAYGHQPVGYPQFVGMPHARMPLPLEMAQEPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKTDDAXXXXXXXXXXXXXIRPSLVWNFTGSEPVPPNPPETRNSS 879
            P  L   + AC  NPYQDPYYGG+M AYGHQ +G+  ++GMP  R  LPL+MAQEPVYVNAKQY GILRRR+ARAKAELE+K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK++                      N +GSE V  +  ET NSS
Sbjct:  118 PPELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNAKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSE----VEAGEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269          

HSP 2 Score: 97.8265 bits (242), Expect = 1.027e-66
Identity = 59/131 (45.04%), Postives = 75/131 (57.25%), Query Frame = 2
Query:   17 MRSKSERTNQLEPDPN-AIPPGAAYTEPWWRGVGYNSISPALAGANVSNSSSLDCPNGSESNDAKSISNDG-LNEEDDDANKESQATASSRSAGNHGQKNQNVQQGASAMPTIRDECFTQPPQLELVGHSI 403
            M+SK  R N+ E + + A+     Y EPWW+   +  +  A      SNSSSLDCPNGSESND  S S DG LN E+D   K+SQA  SSRS  NHG +  +    A ++  + D+   QPP  ELVGH I
Sbjct:    1 MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNGSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGND---PALSIRNMHDQPLVQPP--ELVGHYI 126          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA9_ARATH (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana GN=NFYA9 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.044e-53
Identity = 84/104 (80.77%), Postives = 93/104 (89.42%), Query Frame = 1
Query:  445 ASNPYQDPYYGGMMAAYGHQPVGYPQFVGMPHARMPLPLEMAQEPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKTD 756
            +SNPYQDPYY G+M AYGH P+G+  + GMPH+RMPLP EMAQEPV+VNAKQY  ILRRRQARAKAELEKKLIK RKPYLHESRHQHAMRR RG+GGRFAKKT+
Sbjct:  123 SSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKKTN 226          

HSP 2 Score: 49.6766 bits (117), Expect = 4.044e-53
Identity = 38/104 (36.54%), Postives = 48/104 (46.15%), Query Frame = 2
Query:   95 PWWRGVGY-NSISPALAGANVSNSSSLDCPNGSESNDAKSISNDGLNEEDDDANKESQATASSRSAGNHGQKNQNVQQGASAMPTIRDECFTQPPQLELVGHSI 403
            PW R     N+ S   AG   S S +L      ESN +KS SN      D+  NKESQ T S +SAG++  KNQ         P         PP  +LVGH++
Sbjct:   34 PWHRAAAACNANSSVEAGDKSSKSIAL----ALESNGSKSPSN-----RDNTVNKESQVTTSPQSAGDYSDKNQESLHHGITQP---------PPHPQLVGHTV 119          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA3_ARATH (Nuclear transcription factor Y subunit A-3 OS=Arabidopsis thaliana GN=NFYA3 PE=2 SV=2)

HSP 1 Score: 117.857 bits (294), Expect = 1.036e-25
Identity = 61/105 (58.10%), Postives = 74/105 (70.48%), Query Frame = 1
Query:  436 QACASNPYQDPYYGGMMAA--YGHQPVGYPQFVGMPHARMPLPLEMAQ-EPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF 741
            QA  S  Y DP+YGG++AA      P   PQ V M   R+PLP E+ + +PV+VNAKQY  I+RRRQ RAK E + KLI+ RKPYLHESRH HA++R RGSGGRF
Sbjct:  130 QANFSFHYADPHYGGLLAATYLPQAPTCNPQMVSMIPGRVPLPAELTETDPVFVNAKQYHAIMRRRQQRAKLEAQNKLIRARKPYLHESRHVHALKRPRGSGGRF 234          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA7_ARATH (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana GN=NFYA7 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.145e-24
Identity = 59/105 (56.19%), Postives = 73/105 (69.52%), Query Frame = 1
Query:  454 PYQDPYYGGMMAAYGHQPVG-YPQFVGMPHARMPLPLEMAQEPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKTDD 759
            PY DPYY  + A       G + Q +G+    +PLP +  +EPV+VNAKQY GILRRRQ+RA+ E + K+IK RKPYLHESRH HA+RR RG GGRF  AKK D+
Sbjct:   59 PYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYHGILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDE 163          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA4_ARATH (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana GN=NFYA4 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.145e-24
Identity = 58/105 (55.24%), Postives = 70/105 (66.67%), Query Frame = 1
Query:  454 PYQDPYYGGMMAAYGHQPVGYP----QFVGMPHARMPLPLEMAQEPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKK 750
            PY DPYY  + A   + P  YP    Q +GM    +PL  +  +EPV+VNAKQY GILRRRQ+RAK E   + IK +KPY+HESRH HA+RR RG GGRF  AKK
Sbjct:   54 PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRRRQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKK 158          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA6_ARATH (Nuclear transcription factor Y subunit A-6 OS=Arabidopsis thaliana GN=NFYA6 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.072e-22
Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 1
Query:  466 PYYGGMMA-AYGHQ-PVGYPQFVGMPHARMPLPLEMAQ-EPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF 741
            P++ G ++  Y  Q  V +PQ  G+  +RMPLP  + + EP++VNAKQY  ILRRR+ RAK E + KLIKVRKPYLHESRH HA++R RGSGGRF
Sbjct:  132 PHFNGFLSFPYASQHTVQHPQIRGLVPSRMPLPHNIPENEPIFVNAKQYQAILRRRERRAKLEAQNKLIKVRKPYLHESRHLHALKRVRGSGGRF 226          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA8_ARATH (Nuclear transcription factor Y subunit A-8 OS=Arabidopsis thaliana GN=NFYA8 PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 3.119e-22
Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 1
Query:  457 YQDPYYGGMM-AAYGHQP-VGYPQFVGMPHARMPLPLEMAQ-EPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF 741
            Y DP++GG+M AAY  Q  +  PQ       R+PLP ++ + EPV+VNAKQ+  I+RRRQ RAK E + KLIK RKPYLHESRH HA++R RGSGGRF
Sbjct:  135 YADPHFGGLMPAAYLPQATIWNPQMT-----RVPLPFDLIENEPVFVNAKQFHAIMRRRQQRAKLEAQNKLIKARKPYLHESRHVHALKRPRGSGGRF 227          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA5_ARATH (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 5.883e-21
Identity = 52/95 (54.74%), Postives = 68/95 (71.58%), Query Frame = 1
Query:  469 YYGGMMAA-YGHQPVGYP--QFVGMPHARMPLPLEMAQ-EPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRF 741
            ++ G +A  Y   P   P  + +G+  +R+PLP  + + EP++VNAKQY  ILRRR+ RAK E + KLIK RKPYLHESRH HA++RARGSGGRF
Sbjct:  139 HFNGFLAPEYASTPTALPHLEMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRKPYLHESRHLHALKRARGSGGRF 233          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYAA_ARATH (Nuclear transcription factor Y subunit A-10 OS=Arabidopsis thaliana GN=NFYA10 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 1.227e-18
Identity = 56/108 (51.85%), Postives = 71/108 (65.74%), Query Frame = 1
Query:  451 NPYQDPYYGGMMAAYGHQPVGYPQFVGMPHARMPLPLEMAQEP---VYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRFAK-KTDDA 762
            +P+ + YYG +++AYG Q             R+ +PL+M  E    +YVN+KQY GI+RRRQ+RAKAE   KL + RKPY+H SRH HAMRR RGSGGRF   KT DA
Sbjct:  100 HPHVEQYYG-VVSAYGSQ---------RSSGRVMIPLKMETEEDGTIYVNSKQYHGIIRRRQSRAKAE---KLSRCRKPYMHHSRHLHAMRRPRGSGGRFLNTKTADA 194          
BLAST of DY271263 vs. ExPASy Swiss-Prot
Match: NFYA_DICDI (Nuclear transcription factor Y subunit alpha OS=Dictyostelium discoideum GN=nfyA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.602e-18
Identity = 47/76 (61.84%), Postives = 52/76 (68.42%), Query Frame = 1
Query:  535 PHARMPLPLEMAQEPVYVNAKQYMGILRRRQARAKAELEKKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKTDDA 762
            PH       E+ +EP+YVNAKQY  IL+RR ARAK E E KL K RK Y HESRHQHA+RR RG GGRF  K D A
Sbjct:  216 PHMLYARMAEIVEEPLYVNAKQYNRILKRRAARAKLESENKLPKTRKAYQHESRHQHAIRRQRGCGGRFLTKADQA 291          
The following BLAST results are available for this feature:
BLAST of DY271263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
NFYA1_ARATH1.027e-6658.97Nuclear transcription factor Y subunit A-1 OS=Arab... [more]
NFYA9_ARATH4.044e-5380.77Nuclear transcription factor Y subunit A-9 OS=Arab... [more]
NFYA3_ARATH1.036e-2558.10Nuclear transcription factor Y subunit A-3 OS=Arab... [more]
NFYA7_ARATH1.145e-2456.19Nuclear transcription factor Y subunit A-7 OS=Arab... [more]
NFYA4_ARATH1.145e-2455.24Nuclear transcription factor Y subunit A-4 OS=Arab... [more]
NFYA6_ARATH1.072e-2257.89Nuclear transcription factor Y subunit A-6 OS=Arab... [more]
NFYA8_ARATH3.119e-2258.16Nuclear transcription factor Y subunit A-8 OS=Arab... [more]
NFYA5_ARATH5.883e-2154.74Nuclear transcription factor Y subunit A-5 OS=Arab... [more]
NFYAA_ARATH1.227e-1851.85Nuclear transcription factor Y subunit A-10 OS=Ara... [more]
NFYA_DICDI1.602e-1861.84Nuclear transcription factor Y subunit alpha OS=Di... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YG09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271263 ID=DY271263; Name=DY271263; organism=Citrus clementina; type=EST; length=1054bp
AAGGAATCTCAATGGCATGCGGTCCAAGTCTGAGAGAACAAATCAATTAG
AGCCTGATCCAAATGCAATTCCACCAGGTGCAGCTTATACTGAACCTTGG
TGGCGTGGTGTTGGATATAATTCTATCTCACCTGCTTTGGCTGGGGCAAA
TGTATCAAATTCATCTTCATTGGATTGTCCAAATGGTTCAGAGTCCAATG
ATGCTAAATCAATATCTAATGATGGGTTGAATGAAGAAGATGATGATGCT
AACAAAGAATCACAGGCTACCGCATCTTCACGGTCAGCTGGGAATCATGG
ACAAAAGAACCAAAATGTGCAGCAAGGTGCATCAGCTATGCCAACAATAC
GTGATGAATGCTTCACTCAGCCTCCACAGCTTGAACTTGTGGGCCACTCA
ATTAAGGGACTCCTAGTTTTCTTGCAACTTTTTGGCAGGCTTGTGCATCA
AATCCATATCAGGATCCATATTATGGAGGGATGATGGCAGCTTATGGTCA
TCAACCTGTGGGTTATCCTCAATTTGTTGGAATGCCTCATGCTAGAATGC
CTTTACCACTTGAGATGGCACAAGAACCTGTTTATGTGAATGCCAAACAG
TACATGGGGATTTTGAGGCGAAGACAGGCACGTGCTAAAGCAGAGCTTGA
AAAGAAACTAATAAAAGTTAGAAAGCCGTATCTTCACGAGTCTCGGCACC
AGCATGCAATGAGAAGGGCAAGGGGTAGTGGAGGACGGTTTGCAAAGAAA
ACTGATGATGCTTCCAAGGGTAATAGTGAAAAGAAGGGTGGAGGTTCAGG
GATCAGGCCATCTCTGGTCTGGAATTTCACTGGATCTGAACCCGTGCCAC
CCAACCCACCTGAAACCCGGAATTCCTCCCCTAGCTAGCAAGAATGTGGT
GGGTTCTCAGCCCACAACATGGCTGGAACCCCGCAATCTGGGAAAGGCCA
GGGTGGGTTCCCCAAATCATGGCCCTCTCACCATCACACTACCTTTCCCC
CTTTTGGTGATAAAGGGGGAAACGGGAAAACGTTTCCGGCCAACCCGGTG
GGAA
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