DY271317

Overview
NameDY271317
Unique NameDY271317
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1014
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271317 vs. ExPASy Swiss-Prot
Match: Y3684_ARATH (Acyltransferase-like protein At3g26840, chloroplastic OS=Arabidopsis thaliana GN=At3g26840 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.154e-49
Identity = 97/170 (57.06%), Postives = 123/170 (72.35%), Query Frame = 2
Query:  233 EDEAETKQRVNVREYSEEESEGNG--KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVKSTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVTILVNPANSFHKSVLQ 736
            ++   T  +V    YS+ E+      K L D+ +EA + +    GGGPPRWFSPLECG+   +SPLLL+LPGIDG GLGLIR H++LG+IFDIWCLHIPV DRT    LVKL++ TV+SE+ R P RP+YLVGES+GAC+AL VAARNP+IDL  ILVNPA   +  ++Q
Sbjct:   59 DENRATVAKVVENPYSKVEAARPDLQKRLSDFLEEAREFV--GDGGGPPRWFSPLECGAQATNSPLLLYLPGIDGTGLGLIRHHKKLGEIFDIWCLHIPVSDRTPVKDLVKLIEETVKSENFRLPNRPIYLVGESIGACLALDVAARNPNIDLSLILVNPATHVNNFMVQ 226          
BLAST of DY271317 vs. ExPASy Swiss-Prot
Match: Y1457_ARATH (Acyltransferase-like protein At1g54570, chloroplastic OS=Arabidopsis thaliana GN=At1g54570 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.824e-48
Identity = 98/207 (47.34%), Postives = 136/207 (65.70%), Query Frame = 2
Query:  212 KKSSELVEDEAETKQRVNVREYSEEESEGNG-KSLKDYFDEAEDMIKSSSGGGPPRWFSPLECGSHTRDSPLLLFLPGIDGVGLGLIRQHQRLGKIFDIWCLHIPVKDRTSFTGLVKLVKSTVRSESNRSPKRPVYLVGESLGACIALAVAARNPDIDLVTILVNPANSFHKSVLQSSIPFLELHTRPNKQLCLSSTLSLMTGEPFK 829
            +K +  V  + ++K+++   E      +G G KS+KDYF  A++++K+   GGPPRWFSP++CG    D+P LLFLPG+DG G+GL+  H+ LGK F + CLHIPV DRT F GL+K+V+  +R E    P +P+YLVG+S G C+ALAVAARN  +DLV ILVNPA SF +S LQ  +P LE+         +   LS + G+P K
Sbjct:   58 QKGANEVNGKGKSKRKIVSDEIELLWDDGYGSKSVKDYFAAAKEILKAD--GGPPRWFSPVDCGRPVEDAPTLLFLPGMDGTGMGLVPHHKALGKAFHVSCLHIPVLDRTPFEGLLKVVEDVLRQEQATRPNKPIYLVGDSFGGCLALAVAARNRSLDLVLILVNPATSFDRSPLQPLLPILEM-VPEELHFTVPYALSFIMGDPIK 261          
The following BLAST results are available for this feature:
BLAST of DY271317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3684_ARATH2.154e-4957.06Acyltransferase-like protein At3g26840, chloroplas... [more]
Y1457_ARATH1.824e-4847.34Acyltransferase-like protein At1g54570, chloroplas... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271317 ID=DY271317; Name=DY271317; organism=Citrus clementina; type=EST; length=1014bp
GAAATTCTTACTTCGGTTCTAGATGGCGACGGTCGGAGCTTGCATCTTTT
CGGCCGTTTCCTCGCCGGTTTTTCGTCGACAAATTACGTCGTCGTCCGAG
AAGCCGAAACGGAATCCTATATTGAAGCGAGTAGCGGTGTCAACGGAGCG
GACGTCAGCTGCAACGACGACAGTGATGACGGAAACGACGCCGACGAGGA
TATTTGTGGAGAAGAAGAGTAGCGAGTTAGTAGAAGATGAAGCTGAGACG
AAACAGAGAGTTAACGTGAGAGAATATTCGGAGGAGGAGAGTGAAGGTAA
CGGAAAGAGCTTGAAAGATTACTTTGATGAAGCCGAAGATATGATCAAAT
CGTCATCAGGCGGCGGTCCGCCCCGCTGGTTCTCGCCGTTAGAATGCGGG
TCCCACACTCGCGATTCTCCTCTCCTCCTCTTTTTGCCTGGGATCGACGG
TGTTGGACTTGGACTTATAAGACAGCATCAAAGACTTGGAAAGATATTTG
ATATATGGTGCTTGCATATTCCAGTTAAGGATCGGACATCATTTACAGGT
CTAGTAAAGCTGGTTAAAAGCACTGTAAGGTCAGAGAGTAACCGTTCACC
AAAGAGGCCCGTATATCTTGTTGGAGAATCTCTTGGAGCTTGCATTGCAC
TTGCTGTCGCAGCCCGCAATCCTGACATCGATCTTGTTACAATTTTGGTC
AATCCAGCAAACTCTTTCCATAAGTCGGTGCTGCAATCCTCAATACCTTT
TCTGGAGCTCCATACCAGGCCAAATAAACAACTATGCCTGTCTTCTACTT
TGAGCTTAATGACAGGTGAACCTTTTAAAGAAGGGCAATGGACAATGGGG
GCGAAACGGCTCCTCTTTGCCACCAACCATAACCAAAACCTTTCCCAGGA
TTCCCGTTGCTTACTCACCCTTCCCTTCCTGGTTTTGGCGCAAAATCCCA
ACCACAGGAAAACCCCCCTCTCTGGGAAAAAAAAAGATGGCTTAAGGGCC
CCCTCTCGGAATAA
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