DY271319

Overview
NameDY271319
Unique NameDY271319
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1068
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271319 vs. ExPASy Swiss-Prot
Match: SC61B_ARATH (Protein transport protein Sec61 subunit beta OS=Arabidopsis thaliana GN=At2g45070 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.601e-16
Identity = 41/44 (93.18%), Postives = 44/44 (100.00%), Query Frame = 2 
Query:  155 TMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVR 286
            +MLQFYTDDAPGLKISPNVVL+MSIGFIAFVAVLHVMGKLYFV+
Sbjct:   39 SMLQFYTDDAPGLKISPNVVLIMSIGFIAFVAVLHVMGKLYFVK 82
The following BLAST results are available for this feature:
BLAST of DY271319 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
SC61B_ARATH2.601e-1693.18Protein transport protein Sec61 subunit beta OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271319 ID=DY271319; Name=DY271319; organism=Citrus clementina; type=EST; length=1068bp
GACGATCTGAATTTTTTCGAGTGGAGTCAAAATGGCTTTGACCGGACCTG
CACCGCCCAGAGGAAGCGCAGCAGCTACTGCAAATATGCGTAGGAGGAGG
ACGAGCAGTGCTGGGGCTGGGGCTGGGGCTGGGGCCTCGGGAGGTGCAGC
TGGTACCATGCTCCAGTTTTACACAGATGATGCTCCAGGACTTAAGATCT
CTCCGAATGTTGTGCTTGTCATGAGCATTGGATTCATTGCCTTTGTTGCT
GTTCTTCATGTCATGGGAAAGCTTTACTTTGTCCGAAAAGAGTAGAGCAG
CCTGTATTTGATAGCATACTAAATCTAAATTCGGTATGATGTGCCTGGAT
TTTGAAAACACAGATTTAGCTTTCGTTCAATTTACTGGTGGTTGAGGTTG
CTTAATGTACTTGTATCTCTGGAAAGATTCACTACTAGTCAATGACCTTA
AAGAGTGTCAAAATATACATCCTTTCCTTCCAATGGAAAATCGATCATTA
CTATGGAGAAAAAGAAAAGGATAAAAAAGTACAACATTTTATGATCAAAA
GTAGTATTAAGATAAACAATTGCTTAGAAAAATAGTCGAACTAAACTTGG
CCCCCACCAGCACAAATAACAATTCATAATTTCTTATTTATCTTATATTC
ACTCATTTCTAGTCCCAACTTTCCTGCCCTAAACGTCTTTCTGCTTCGCT
TTAGTTTGCCTTGCTGTAAGCGTATCGGTGCTCACTGGTCTTAGTCTGCA
GATATCTGAATCACGTCATACACAACCGTAGAAATACGAATCAGAGGACC
AAATAAACGCTCATATACAGAGCATAACAATTTATGATTTACGCAATCAA
CAGCACAATTATGGACGATGACAGAATATTATGCTTTCATAATGTCTGGA
CTGTATTACAACAGTACAGAACCCCAGAACAATAATAAAATACCTCAAAC
CCCAAAGCTCATAAATACAGATAAACCTTAATCTACTTCTTACAGGTCGG
CTCTGACGTTCGACACACTTACCCTCTCACACTATCAACTTATTCTCTCT
CTACTTTACTATATTGTT
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