DY271323

Overview
NameDY271323
Unique NameDY271323
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1061
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: RH56_ARATH (DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana GN=RH56 PE=2 SV=2)

HSP 1 Score: 440.269 bits (1131), Expect = 9.191e-123
Identity = 232/335 (69.25%), Postives = 261/335 (77.91%), Query Frame = 2
Query:   56 MGETRDNXXXXXXXXXXXXXAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWA--GKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            MG+ RDN              +       K NGEA KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC+KF    +   ++++  +         H I+ +   K  KL+D L+  +  Q++  VK V++A EL  LLV+  FP IC+  G    ++ LTR+K
Sbjct:    1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF--MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER-LTRYK 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: RH15_ARATH (DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana GN=RH15 PE=2 SV=2)

HSP 1 Score: 439.884 bits (1130), Expect = 1.200e-122
Identity = 232/335 (69.25%), Postives = 261/335 (77.91%), Query Frame = 2
Query:   56 MGETRDNXXXXXXXXXXXXXAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWA--GKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            MG+ RDN              +       K NGEA KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ EP+PGQV+ALVLCHTRELAYQIC+EF RFSTYLPD KV+VFYGGVNIKIHKDLLKNECP IVVGTPGR+LALAR+KDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC+KF    +   ++++  +         H I+ +   K  KL+D L+  +  Q++  VK V++A EL  LLV+  FP IC+  G    ++ LTR+K
Sbjct:    1 MGDARDNEAYEEELLDYEEEDEKVPDSGNKVNGEAVKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF--MQDPMEIYVDDEAKLTLHGLVQHYIKLSEMEKTRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEER-LTRYK 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: RH15_ORYSJ (DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica GN=Os01g0550000 PE=2 SV=1)

HSP 1 Score: 410.609 bits (1054), Expect = 7.799e-114
Identity = 216/310 (69.68%), Postives = 247/310 (79.68%), Query Frame = 2
Query:  131 SVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEW--AGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            + A  A+ +  KKGYVGIHSSGFRDFLLKPELLRAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P  GQV ALVLCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRILALAR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC+KF    +   ++++  +         H I+   A K  KL+D L+  +  Q++  VK V++A EL  LL +  FP I +  G    ++ LTR+K
Sbjct:   31 AAAANASADVVKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF--MQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEER-LTRYK 337          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: RH56_ORYSJ (DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica GN=Os01g0549700 PE=2 SV=2)

HSP 1 Score: 410.223 bits (1053), Expect = 1.019e-113
Identity = 216/308 (70.13%), Postives = 246/308 (79.87%), Query Frame = 2
Query:  137 ATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEW--AGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFK 1054
            A  A+ +  KKGYVGIHSSGFRDFLLKPELLRAI D GFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLS+LQQ +P  GQV ALVLCHTRELAYQICHEFERFS YLP++KVAVFYGGV+IK HKDLLKN+CP IVVGTPGRILALAR+KDLSLKNVRHFILDECDKML+SLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVC+KF    +   ++++  +         H I+   A K  KL+D L+  +  Q++  VK V++A EL  LL +  FP I +  G    ++ LTR+K
Sbjct:   33 AANASADVVKKGYVGIHSSGFRDFLLKPELLRAIQDCGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVAGQVGALVLCHTRELAYQICHEFERFSKYLPEVKVAVFYGGVHIKKHKDLLKNDCPHIVVGTPGRILALAREKDLSLKNVRHFILDECDKMLDSLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCKKF--MQDPMEIYVDDEAKLTLHGLVQHYIKLSEAEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLCECNFPAISIHSGMTQEER-LTRYK 337          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_PONAB (Spliceosome RNA helicase BAT1 OS=Pongo abelii GN=BAT1 PE=2 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 4.154e-99
Identity = 193/318 (60.69%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_PIG (Spliceosome RNA helicase BAT1 OS=Sus scrofa GN=BAT1 PE=3 SV=2)

HSP 1 Score: 361.688 bits (927), Expect = 4.154e-99
Identity = 193/318 (60.69%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_PANTR (Spliceosome RNA helicase BAT1 OS=Pan troglodytes GN=BAT1 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 4.154e-99
Identity = 193/318 (60.69%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_MACMU (Spliceosome RNA helicase BAT1 OS=Macaca mulatta GN=BAT1 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 4.154e-99
Identity = 193/318 (60.69%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_HUMAN (Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 4.154e-99
Identity = 193/318 (60.69%), Postives = 233/318 (73.27%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P++KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
BLAST of DY271323 vs. ExPASy Swiss-Prot
Match: UAP56_BOVIN (Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 5.426e-99
Identity = 193/318 (60.69%), Postives = 232/318 (72.96%), Query Frame = 2
Query:  128 DSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPVCQKFYARSNGNFMWMNKASXXXXXXXXXH*IEWAGKKPKLDDPLEPWNLIQLLFLVKGVTQARELKSLLVKRIFPLICLPFGAGPPKKGLTRFKR 1057
            D V T A G+ A        K  YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP  GQV+ LV+CHTRELA+QI  E+ERFS Y+P +KVAVF+GG++IK  +++LK  CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSATLSKEIRPVC+KF       F+                 ++   K  KL D L+     Q++  VK V +   L  LLV++ FP I +  G  P ++ L+R+++
Sbjct:   16 DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGM-PQEERLSRYQQ 332          
The following BLAST results are available for this feature:
BLAST of DY271323 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RH56_ARATH9.191e-12369.25DEAD-box ATP-dependent RNA helicase 56 OS=Arabidop... [more]
RH15_ARATH1.200e-12269.25DEAD-box ATP-dependent RNA helicase 15 OS=Arabidop... [more]
RH15_ORYSJ7.799e-11469.68DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sa... [more]
RH56_ORYSJ1.019e-11370.13DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sa... [more]
UAP56_PONAB4.154e-9960.69Spliceosome RNA helicase BAT1 OS=Pongo abelii GN=B... [more]
UAP56_PIG4.154e-9960.69Spliceosome RNA helicase BAT1 OS=Sus scrofa GN=BAT... [more]
UAP56_PANTR4.154e-9960.69Spliceosome RNA helicase BAT1 OS=Pan troglodytes G... [more]
UAP56_MACMU4.154e-9960.69Spliceosome RNA helicase BAT1 OS=Macaca mulatta GN... [more]
UAP56_HUMAN4.154e-9960.69Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=B... [more]
UAP56_BOVIN5.426e-9960.69Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YJ16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271323 ID=DY271323; Name=DY271323; organism=Citrus clementina; type=EST; length=1061bp
CTCTCGCCAAACTCTAACCCTAAAACCCCAACCGTTTATTCGAATACTGG
CAGGAATGGGAGAGACAAGAGACAACGAGTACGAGGATGAGCTTCTCGAC
TACGAGGAAGAAGATGCTCAAGCTCCCGATTCCGTCGCTACCAAAGCAAA
CGGCGAAGCCGCCAAGAAGGGCTATGTTGGTATACACAGTTCAGGATTCA
GAGACTTTCTTTTGAAGCCGGAACTTCTTCGTGCAATTGTGGACTCAGGA
TTTGAGCATCCTTCAGAAGTGCAACATGAATGCATACCTCAAGCGATTCT
GGGCATGGATGTTATTTGCCAAGCTAAATCAGGGATGGGGAAGACTGCTG
TGTTTGTTCTGTCAACTCTTCAGCAAACAGAGCCAAATCCAGGCCAAGTT
ACTGCACTTGTTTTATGTCACACTAGAGAGTTAGCTTATCAGATCTGCCA
TGAGTTTGAGAGGTTCAGTACTTACCTGCCTGATATCAAGGTTGCTGTCT
TTTATGGTGGAGTTAATATAAAAATTCACAAAGATTTGCTGAAAAACGAA
TGTCCCCAAATTGTTGTCGGGACTCCTGGAAGGATACTAGCTCTTGCTAG
AGATAAAGACCTCTCTTTGAAGAATGTGAGGCATTTTATCCTTGATGAAT
GCGATAAGATGCTGGAATCTCTTGACATGAGAAGAGATGTGCAAGAGATT
TTCAAGATGACTCCTCATGACAAGCAAGTAATGATGTTTTCCGCAACACT
CAGCAAGGAAATCCGCCCAGTCTGCCAGAAATTTTATGCAAGATCCAATG
GAAATTTTATGTGGATGAACAAGGCAAGTTGACTCCTTCTGGTCTTGGTC
CGCCTTCATTAAATTGAGTGGGCTGGAAAAAAACCGAAATTGGATGATCC
CCTTGAGCCTTGGAATTTAATCCAGTTGTTATTCTTGGTCAAAGGGGTTA
CCCAAGCACGGGAGTTAAAAAGTTTATTGGTAAAAAGGATTTTTCCTCTC
ATTTGCCTTCCCTTTGGGGCTGGGCCACCAAAAAAAGGGTTGACCCGGTT
CAAAAGGGTTC
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