DY271327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271327 vs. ExPASy Swiss-Prot
Match: 21KD_DAUCA (21 kDa protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.985e-39 Identity = 89/197 (45.18%), Postives = 124/197 (62.94%), Query Frame = 1 Query: 16 KLSLVSLALFFHLYLAGMANSAIPGHSTPAN-FIRNSCRASRYPALCVQCLSGYGHAIRNEHQ-LAVTXXXXXXXXXXXXXXFVGKLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSSVQTWVSAALTDENTCLDDFDGRFMDGNVKAAIRRRVTNVAQVTSNALALVNRFAARHQ 600 KLS +L L + A++A PAN FI+ SC + YPA+C Q LS Y I+N Q LA T F+ +L K +G+K R++ A+ DC+E + D +DR+S+S E+ ++ A G DFT+ MS+V+TWVSAALTDE TC+D F G+ MDG +K ++R +V VA+VTSNALALVN FAA+H+ Sbjct: 2 KLSKSTLVFSALLVILAAASAA------PANQFIKTSCTLTTYPAVCEQSLSAYAKTIQNNPQELASTALQVSLTRTQQAQTFMKRLNKFKGLKARQYAAIHDCLEEVEDSLDRVSRSCDEMKNLSHAKGNDFTFRMSNVETWVSAALTDETTCMDGFAGKGMDGKIKESVRAQVVAVARVTSNALALVNNFAAKHK 192
BLAST of DY271327 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 5.423e-12 Identity = 56/197 (28.43%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 16 KLSLVS--LALFFHLYLAGMANSAIPGHS----TPANF--IRNSCRASRYPALCVQCL-SGYGHAIRNEHQLAVTXXXXXXXXXXXXXXFVGKLTKVR-GIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSSVQTWVSAALTDENTCLDDFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 576 KL L+S +AL F +AG++ A + +P++ +R+SC ++RYP LC+ + + G + ++ + V KL K R G+ RE A+ DC+E + + +D L ++V +L H+ + H ++T +S+A+T++ TCLD F D V+ A+ + +V + SNALA++ Sbjct: 19 KLVLLSAAVALLFVAAVAGISAGASKANEKRTLSPSSHAVLRSSCSSTRYPELCISAVVTAGGVELTSQKDVIEASVNLTITAVEHNYFTVKKLIKKRKGLTPREKTALHDCLETIDETLDELHETVEDL-HL-YPTKKTLREHAGDLKTLISSAITNQETCLDGFSHDDADKQVRKALLKGQIHVEHMCSNALAMI 213
BLAST of DY271327 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11 Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 73 NSAIPGHSTPANFIRNSCRASRYPALCVQCLSGYGHAIRN-EHQLAVTXXXXXXXXXXXXXXFVG--KLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSSVQTWVSAALTDENTCLDDFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 576 NS G+ +++SC ++RYP LC ++ A + Q V + G KL K + KRE +A+ DC+E + + +D L ++V +L + + H ++T +SAA+T++ TCLD F + +V+ A+ +V ++ SNALA++ Sbjct: 56 NSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNK--KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224
BLAST of DY271327 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.578e-11 Identity = 47/171 (27.49%), Postives = 84/171 (49.12%), Query Frame = 1 Query: 73 NSAIPGHSTPANFIRNSCRASRYPALCVQCLSGYGHAIRN-EHQLAVTXXXXXXXXXXXXXXFVG--KLTKVRGIKKREFLAVKDCIENMGDGVDRLSQSVRELGHVGRAVGQDFTWHMSSVQTWVSAALTDENTCLDDFDGRFMDGNVKAAIRRRVTNVAQVTSNALALV 576 NS G+ +++SC ++RYP LC ++ A + Q V + G KL K + KRE +A+ DC+E + + +D L ++V +L + + H ++T +SAA+T++ TCLD F + +V+ A+ +V ++ SNALA++ Sbjct: 56 NSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNK--KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMI 224 The following BLAST results are available for this feature:
BLAST of DY271327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271327 ID=DY271327; Name=DY271327; organism=Citrus clementina; type=EST; length=930bpback to top |