DY271343

Overview
NameDY271343
Unique NameDY271343
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1017
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY271343 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 9.322e-77
Identity = 160/312 (51.28%), Postives = 202/312 (64.74%), Query Frame = 2 
Query:   14 CCGSTKFAKEMASASPFASLNQAVSAARHIWFNLVDVNGWLDAFSAHPQIGQSPS-------SQWSKAEQSTALATANESSSQELSDWNNRYRLRFGFIFIICASGRTAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATAKT-AEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPPPLFGETDVSGWV*QGSSTTNKDGPCGPLMGMIEDLNPGFYKITFHTGKYGPKRIFP*VSIGFEIRESQNRENFPVPSLAPPF 925
            CCGS++FAK+M+++ P  S  +A+  AR IWFN V+V  WL+AFSAHPQIG +PS       ++ S +EQSTA AT + S+ QEL++WN  Y+ +FGFIFIICASGRT AE+L  LK+RY NRPI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G   P  F       W   G+S T++DG  GPLM +++ LNPG Y+I+F T KY P   FP VSI F++ ESQ  E+F VP L  PF
Sbjct:   13 CCGSSEFAKQMSTSGPLTS-QEAIYTARDIWFNQVNVTDWLEAFSAHPQIGNTPSPSINSDFARRSVSEQSTAFATTSASALQELAEWNVLYKKKFGFIFIICASGRTHAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSGTTGPS-FVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFFPYVSIVFQVTESQKWEHFHVPLLLAPF 316
The following BLAST results are available for this feature:
BLAST of DY271343 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TTHL_ARATH9.322e-7751.28Uric acid degradation bifunctional protein TTL OS=... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAP9YK16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271343 ID=DY271343; Name=DY271343; organism=Citrus clementina; type=EST; length=1017bp
GGAGTTGTTGGGATGCTGCGGTAGCACCAAATTTGCGAAAGAGATGGCGT
CGGCCTCACCTTTTGCATCATTGAATCAAGCCGTCTCAGCAGCTCGACAC
ATCTGGTTCAACCTGGTTGATGTAAACGGCTGGCTTGATGCATTTTCGGC
TCATCCTCAGATCGGCCAATCTCCGTCTTCACAGTGGAGCAAGGCCGAGC
AGTCCACTGCTTTAGCAACTGCTAATGAATCTAGCTCGCAGGAACTGTCC
GACTGGAATAATCGGTACAGGCTGAGATTTGGATTTATATTTATTATATG
TGCATCGGGGAGGACGGCTGCCGAAATACTTGCTGAGTTGAAGAAACGAT
ACACAAACAGGCCCATAATTGAGTTTGAGATTGCTGCTCAGGAGCAAATG
AAAATAACTGAATTACGTCTGGCAAAGCTCTTCTCAGCTAAAGCAAAAGC
TTCTTCTGCAACTTTCCAGTATTCTGCAACTGCAAAAACAGCAGAAGATC
GTGTGAGCATCATAGAAGGACACCTATGTGCTTCTACTGAAGCTTCAGCA
GGGAAAATATCTCAAATCCCTACAAGAACTCGACTACCAATTACAACACA
TGTCTTGGATGTTTCTCAAGGGTCTCCAGCTGCGGGTGTTGAGGTACGTT
TGGAAATGTGGAAGGGCATCCAACCACCTCCCCTCTTTGGCGAAACAGAT
GTCAGTGGGTGGGTGTAACAGGGGTCTTCAACTACAAATAAAGATGGACC
ATGTGGTCCATTGATGGGCATGATTGAAGACTTGAACCCTGGATTTTACA
AGATAACCTTTCACACCGGTAAATACGGTCCCAAAAGGATTTTTCCCTAA
GTTTCTATTGGGTTTGAAATCAGGGAATCCCAAAACCGAGAAAATTTTCC
GGTTCCCTCGCTGGCCCCCCCCTTTCCCATTCCCAACCCAACCGGGGGAA
CCCAAAATGTGTTGGGTGGGTTTGGTTGACAAAAAAAAAACATTGGGGGG
CTGTGGGTGTCGAAAAA
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