DY271361

Overview
NameDY271361
Unique NameDY271361
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length984
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3904 contig Ccv1_Contig3904:1..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_CYAP7 (Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 7424) GN=pgi PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 1.114e-45
Identity = 57/90 (63.33%), Postives = 70/90 (77.78%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLT 529
            +QGTR ALY N R+S+T+T+ EV PR+VGALVALYERAV  Y SLVN+NAYHQPGVEAGKKAA  +L LQ+ V+  L EA  +  +E L+
Sbjct:  394 IQGTRQALYENHRDSITITIPEVNPRTVGALVALYERAVSFYGSLVNVNAYHQPGVEAGKKAAASILELQQNVMKALKEAGTELDLETLS 483          

HSP 2 Score: 65.4698 bits (158), Expect = 1.114e-45
Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREGV NFF TFIEVL DR  G   ELEPGVT GDYL G +Q
Sbjct:  350 AYVQQLREGVPNFFVTFIEVLEDR-QGSSIELEPGVTSGDYLAGFIQ 395          

HSP 3 Score: 42.3578 bits (98), Expect = 1.114e-45
Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKVYLG 746
            ++E +YKI+ H+AAN+R ++ +G  G P T+KV  G
Sbjct:  491 KVEAVYKIVRHLAANNRGVMLKGDLGKPTTLKVSFG 526          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_NOSP7 (Glucose-6-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=pgi PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 1.448e-45
Identity = 62/104 (59.62%), Postives = 81/104 (77.88%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDV 571
            LQGTR ALY N R+S+TVT+ +V PR+VGAL+ALYERAVG+YASLVN+NAYHQPGVEAGKKAA  +L LQ RV+AVL +        P+++DE+A++    + +
Sbjct:  396 LQGTRQALYENHRDSITVTIPQVNPRTVGALIALYERAVGLYASLVNVNAYHQPGVEAGKKAAASILDLQTRVVAVLQKEK-----TPISLDELAKKAGASDQI 494          

HSP 2 Score: 65.4698 bits (158), Expect = 1.448e-45
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREGV NFFATF+EVL DR  G   E++PGVT GDYL G LQ
Sbjct:  352 AYVQQLREGVANFFATFVEVLEDR-QGPSTEIDPGVTSGDYLSGFLQ 397          

HSP 3 Score: 33.4982 bits (75), Expect = 1.448e-45
Identity = 14/33 (42.42%), Postives = 21/33 (63.64%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKV 737
            QIE IYKI+ H+ AN R ++ +G    P ++ V
Sbjct:  493 QIEAIYKILRHIHANQRGVVLQGDLHKPGSLTV 525          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_SYNY3 (Glucose-6-phosphate isomerase OS=Synechocystis sp. (strain PCC 6803) GN=pgi PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 9.701e-44
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDVCT 577
            LQGTR AL+ N R+S+TVT+ EV   SVGAL+ALYERAV  Y SLVN+NAYHQPGVEAGKKAA  +L LQK +L+ L   S      P+ ++ +A +   PE V T
Sbjct:  398 LQGTRQALFENQRDSITVTIPEVDATSVGALIALYERAVSFYGSLVNVNAYHQPGVEAGKKAAASILELQKAILSTLQNES-----GPIALEALATKVQAPEQVET 498          

HSP 2 Score: 66.6254 bits (161), Expect = 9.701e-44
Identity = 34/47 (72.34%), Postives = 37/47 (78.72%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLR+GV NFFATFIEVL DR  G   ELEPGVT GDYL G LQ
Sbjct:  354 AYVQQLRDGVPNFFATFIEVLHDR-QGPSLELEPGVTSGDYLSGFLQ 399          

HSP 3 Score: 35.8094 bits (81), Expect = 9.701e-44
Identity = 13/33 (39.39%), Postives = 23/33 (69.70%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKV 737
            Q+E +YKI+ H+AANDR +  +G    P+ +++
Sbjct:  495 QVETVYKIVRHLAANDRGVTLQGDRQFPQRLQI 527          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_CYAP8 (Glucose-6-phosphate isomerase OS=Cyanothece sp. (strain PCC 8801) GN=pgi PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.032e-42
Identity = 58/104 (55.77%), Postives = 73/104 (70.19%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDV 571
            +QGTR ALY N+R+SVT+T+ +V PR VGAL+ALYER V  Y SLVN+NAYHQPGVEAGKK A  +L+LQ  +  V+     KE V  L +  +AE+   PE V
Sbjct:  394 IQGTRQALYENNRDSVTITIPQVNPRIVGALIALYERTVSFYGSLVNVNAYHQPGVEAGKKMAASILSLQTEIQKVI-----KESVGSLDLVTLAEKAGDPEAV 492          

HSP 2 Score: 65.855 bits (159), Expect = 1.032e-42
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREGV NFFATFIEVL DR  G   EL+PG+T GDYL G +Q
Sbjct:  350 AYVQQLREGVPNFFATFIEVLEDR-QGESIELDPGITSGDYLSGFIQ 395          

HSP 3 Score: 36.965 bits (84), Expect = 1.032e-42
Identity = 14/35 (40.00%), Postives = 23/35 (65.71%), Query Frame = 3
Query:  642 IEMIYKIIAHMAANDRALIAEGSCGSPRTIKVYLG 746
            +E +YKI+ H+AAN R +  +G   +P ++KV  G
Sbjct:  492 VEAVYKIVRHLAANGRGVTLDGDLANPSSLKVSAG 526          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_ANASP (Glucose-6-phosphate isomerase OS=Anabaena sp. (strain PCC 7120) GN=pgi PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 4.987e-42
Identity = 58/104 (55.77%), Postives = 76/104 (73.08%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDV 571
            L GTR ALY N R+S+TVT+ +V  R+VGALVALYER VG+YASLVNINAYHQPGVEAGKKAA  +L LQ +V+ +L +         L+++++AE+    + V
Sbjct:  396 LLGTRQALYENQRDSITVTIPQVNARTVGALVALYERTVGLYASLVNINAYHQPGVEAGKKAAAVILDLQTKVVGLLQKEK-----TALSLEQIAEKIGAADQV 494          

HSP 2 Score: 60.4622 bits (145), Expect = 4.987e-42
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGML 153
            +Y+QQLREGV NFFAT IEVL DR  G   E++PGVT GDYL G L
Sbjct:  352 AYVQQLREGVPNFFATLIEVLEDR-HGASPEIDPGVTSGDYLSGFL 396          

HSP 3 Score: 40.0466 bits (92), Expect = 4.987e-42
Identity = 15/35 (42.86%), Postives = 25/35 (71.43%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKVYL 743
            Q+E IYKI+ H+ AN R ++ +G+ G P ++K+ L
Sbjct:  493 QVEAIYKILRHLQANQRGVVFQGNLGQPSSLKISL 527          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_ANAVT (Glucose-6-phosphate isomerase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgi PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 8.432e-42
Identity = 57/104 (54.81%), Postives = 76/104 (73.08%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDV 571
            L GTR ALY N R+S+TVT+ +V  R+VGAL+ALYER VG+YASLVNINAYHQPGVEAGKKAA  +L LQ +V+ +L +         L+++++AE+    + V
Sbjct:  396 LLGTRQALYENQRDSITVTIPQVNARTVGALIALYERTVGLYASLVNINAYHQPGVEAGKKAAAVILDLQTKVVGLLQKEK-----TALSLEQIAEKIGAADQV 494          

HSP 2 Score: 60.4622 bits (145), Expect = 8.432e-42
Identity = 31/46 (67.39%), Postives = 35/46 (76.09%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGML 153
            +Y+QQLREGV NFFAT IEVL DR  G   E++PGVT GDYL G L
Sbjct:  352 AYVQQLREGVPNFFATLIEVLEDR-NGASPEIDPGVTSGDYLSGFL 396          

HSP 3 Score: 39.6614 bits (91), Expect = 8.432e-42
Identity = 15/33 (45.45%), Postives = 24/33 (72.73%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKV 737
            Q+E IYKI+ H+ AN R ++ +G+ G P ++KV
Sbjct:  493 QVEAIYKILRHLQANQRGVVFQGNLGQPSSLKV 525          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_ACAM1 (Glucose-6-phosphate isomerase OS=Acaryochloris marina (strain MBIC 11017) GN=pgi PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.410e-41
Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDVCT 577
            L GTR ALY   R+S+TVT+ EVT + VGAL+ALYERAVG+YASL+N+NAYHQPGVEAGKKAA + +ALQ +++ +L     +  + PL I  +A++   P+ + T
Sbjct:  396 LLGTREALYEKRRDSITVTLPEVTSKQVGALIALYERAVGLYASLINVNAYHQPGVEAGKKAATDTIALQNKIVQIL-----RNTLTPLPITSLADKAEAPDKIET 496          

HSP 2 Score: 62.3882 bits (150), Expect = 2.410e-41
Identity = 30/46 (65.22%), Postives = 37/46 (80.43%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGML 153
            +Y+Q+LREG+ NFF TFIEVL+DR  G  +E+EPGVT GDYL G L
Sbjct:  352 AYVQELREGIPNFFLTFIEVLKDR-DGTRFEVEPGVTSGDYLSGFL 396          

HSP 3 Score: 32.3426 bits (72), Expect = 2.410e-41
Identity = 14/35 (40.00%), Postives = 23/35 (65.71%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTIKVYL 743
            +IE +YKI+ H+AAN R +   G+   P +++V L
Sbjct:  493 KIETVYKIVRHLAANKRGVELYGNPAEPGSLQVTL 527          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_GEOBB (Glucose-6-phosphate isomerase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=pgi PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 1.368e-40
Identity = 63/105 (60.00%), Postives = 80/105 (76.19%), Query Frame = 2
Query:  263 QGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDVCT 577
            QGTRSALY   RESVT+TV+E++P S+GAL+ALYERAVG+YASLVN+NAYHQPGVEAGK+AAG VL LQ  ++ +L     ++P    T +E+A     PE+V T
Sbjct:  397 QGTRSALYEKGRESVTITVRELSPASIGALIALYERAVGLYASLVNVNAYHQPGVEAGKEAAGAVLKLQGEIMELLR----RQPNRDFTGEEMALALARPEEVET 497          

HSP 2 Score: 67.0106 bits (162), Expect = 1.368e-40
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREGVHNFF TFIEVL+DR  G   E+EPG T GDYL G  Q
Sbjct:  352 AYVQQLREGVHNFFVTFIEVLKDR-QGPSMEVEPGATSGDYLSGFFQ 397          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_GEOSM (Glucose-6-phosphate isomerase OS=Geobacter sp. (strain M21) GN=pgi PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 3.025e-40
Identity = 63/105 (60.00%), Postives = 80/105 (76.19%), Query Frame = 2
Query:  263 QGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDVCT 577
            QGTR+ALY   RESVT+TV+E++P S+GAL+ALYERAVG+YASLVN+NAYHQPGVEAGKKAAG VL LQ  ++ +L     ++P    T +E+A     PE+V T
Sbjct:  397 QGTRAALYEKGRESVTITVRELSPVSIGALIALYERAVGLYASLVNVNAYHQPGVEAGKKAAGAVLKLQGEIVEMLR----RQPNREFTGEEMALALARPEEVET 497          

HSP 2 Score: 66.6254 bits (161), Expect = 3.025e-40
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREGVHNFF TFIEVL+DR  G   E+EPG T GDYL G  Q
Sbjct:  352 AYVQQLREGVHNFFVTFIEVLKDR-EGPSLEVEPGATSGDYLSGFFQ 397          
BLAST of DY271361 vs. ExPASy Swiss-Prot
Match: G6PI_SYNP6 (Glucose-6-phosphate isomerase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=pgi PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.499e-40
Identity = 59/106 (55.66%), Postives = 77/106 (72.64%), Query Frame = 2
Query:  260 LQGTRSALYANDRESVTVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTIDEVAERCHTPEDVCT 577
            LQGTR+ALY N RES+T+TV  V  + VGAL+ALYERAVG+YASLV INAYHQPGVEAGKKAA  VL +Q++++ +L +       +PL+I  +A+     E + T
Sbjct:  396 LQGTRAALYENGRESITITVPRVDAQQVGALIALYERAVGLYASLVGINAYHQPGVEAGKKAAAGVLEIQRQIVELLQQG------QPLSIAAIADDLGQSEQIET 495          

HSP 2 Score: 63.1586 bits (152), Expect = 9.499e-40
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 1
Query:   16 SYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQ 156
            +Y+QQLREG+ NFFATFIEVL DR  G    +EPG+T GDYL G+LQ
Sbjct:  352 AYVQQLREGIPNFFATFIEVLEDR-QGPSPVVEPGITSGDYLSGLLQ 397          

HSP 3 Score: 29.261 bits (64), Expect = 9.499e-40
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 3
Query:  639 QIEMIYKIIAHMAANDRALIAEGSCGSPRTI 731
            QIE IYKI+ H+ AN R +   G   +P ++
Sbjct:  492 QIETIYKILRHLEANQRGVQLTGDRHNPLSL 522          
The following BLAST results are available for this feature:
BLAST of DY271361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
G6PI_CYAP71.114e-4563.33Glucose-6-phosphate isomerase OS=Cyanothece sp. (s... [more]
G6PI_NOSP71.448e-4559.62Glucose-6-phosphate isomerase OS=Nostoc punctiform... [more]
G6PI_SYNY39.701e-4456.60Glucose-6-phosphate isomerase OS=Synechocystis sp.... [more]
G6PI_CYAP81.032e-4255.77Glucose-6-phosphate isomerase OS=Cyanothece sp. (s... [more]
G6PI_ANASP4.987e-4255.77Glucose-6-phosphate isomerase OS=Anabaena sp. (str... [more]
G6PI_ANAVT8.432e-4254.81Glucose-6-phosphate isomerase OS=Anabaena variabil... [more]
G6PI_ACAM12.410e-4153.77Glucose-6-phosphate isomerase OS=Acaryochloris mar... [more]
G6PI_GEOBB1.368e-4060.00Glucose-6-phosphate isomerase OS=Geobacter bemidji... [more]
G6PI_GEOSM3.025e-4060.00Glucose-6-phosphate isomerase OS=Geobacter sp. (st... [more]
G6PI_SYNP69.499e-4055.66Glucose-6-phosphate isomerase OS=Synechococcus sp.... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YL12FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271361 ID=DY271361; Name=DY271361; organism=Citrus clementina; type=EST; length=984bp
CATGTTTGAAATTTTAGCTACATCCAACAACTGAGAGAGGGTGTACACAA
TTTCTTTGCGACTTTCATTGAAGTGCTACGTGATAGACCCCCTGGTCATG
ATTGGGAGCTTGAACCAGGTGTTACATGCGGTGATTACTTGTTTGGAATG
CTTCAGGTTAAGTACATGATTCAAACCATTTTAAACACTGCCTGGTGGCA
CTGGATCTAGAGATAAATTGCATTATATCTTCCTTTACATAATAAAACTG
ATTCAAGCATTACAGGGAACAAGGTCGGCTCTGTATGCTAATGATAGGGA
GTCCGTTACAGTCACTGTGCAAGAAGTGACACCTAGATCGGTGGGGGCTC
TTGTGGCACTTTATGAGCGAGCAGTTGGGATATATGCCTCACTTGTCAAC
ATTAATGCTTACCATCAACCTGGTGTGGAAGCTGGGAAAAAGGCAGCTGG
GGAAGTGTTAGCTCTCCAGAAACGGGTTCTGGCAGTACTAAATGAGGCCA
GCTGCAAGGAACCTGTTGAACCATTAACAATTGATGAAGTTGCTGAACGT
TGCCATACTCCCGAAGATGTATGTACTAACCCTGTTTAAAAAACCATTTT
AACAATGAAATATTTTGCTGACCTTTAGTTTATGACTGCAGATTGAAATG
ATCTACAAAATCATTGCTCACATGGCTGCCAATGATAGAGCGCTGATTGC
TGAAGGCAGTTGTGGTTCACCACGTACCATAAAAGTTTATCTTGGGGAAT
GTACCGTTGATGGATTGATGGCTTAAGTTTCCCTCCTAAGTTGTCTATTT
CAGAGTTCAGGCTTGTGTTTTAATTTAAAACAAAAACCCCCCAATAAACT
ACCCTTACCCTTGTCTCCCTTGAATCAAGATTAAAAATTGGGGAATTTTT
GTTGGCAACCCAACATAATTAAAACCCCCCCCAAAATTATTTTAATTTTC
CCGGAAAACAGGTGGGGGGAATAACAACTCCCCC
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