DY271366
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS22C_PETHY (Small heat shock protein, chloroplastic OS=Petunia hybrida GN=HSP22 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 9.062e-57 Identity = 122/218 (55.96%), Postives = 150/218 (68.81%), Query Frame = 2 Query: 68 LVSREARTSIARRNVAPCSVTLPATS---RKGAYRLQAVRAQAGGENKDTSVDVHVNSGNQG-----TQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 +VS +RT+ + AP SV P + RK A RL A QA G+NKDTSVDVHV++ NQG + ERRPRR ALD+ PFGL+DP P RTMRQM+DTMDRL EDTM FPG SR G G++R PWDIK++ENEIKMRFDMPGL LVIKGEH+ E++G D SW G +++SY+T P+N +K+KVKA LKNGVLL+SI K + Sbjct: 18 VVSATSRTNNKKTTTAPFSVCFPYSKCSVRKPASRLVA---QATGDNKDTSVDVHVSNNNQGGNNQGSAVERRPRRMALDVSPFGLLDPMSPMRTMRQMMDTMDRLFEDTMTFPG-SRNRGTGEIRAPWDIKDDENEIKMRFDMPGLSKEEVKVSVEDDVLVIKGEHKKEESGKDDSW-GRNYSSYDTRLSLPDNVDKDKVKAELKNGVLLISIPKTK 230
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS21C_SOLLC (Small heat shock protein, chloroplastic OS=Solanum lycopersicum GN=HSP21 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.890e-54 Identity = 117/219 (53.42%), Postives = 146/219 (66.67%), Query Frame = 2 Query: 65 PLVSREARTSIARRN----VAPCSVTLPATSRKGAYRLQAVRAQAGGENKDTSVDVHVNSG----NQGTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 PLVS + ++ N APCSV +P+ R+ RL A +A G+NKDTSVDVH +S NQGT ERRP R ALD+ PFG++DP P RTMRQM+DTMDRL EDTM FPGR+RA G G++RTPWDI ++ENEIKMRFDMPGL LVIKGEH+ E+ G D G +++SY+T P+N K+K+KA LKNGVL +SI K + Sbjct: 10 PLVSNVSVGGTSKINNNKVSAPCSVFVPSM-RRPTTRLVA---RATGDNKDTSVDVHHSSAQGGNNQGTAVERRPTRMALDVSPFGVLDPMSPMRTMRQMIDTMDRLFEDTMTFPGRNRASGTGEIRTPWDIHDDENEIKMRFDMPGLSKEDVKVSVENDMLVIKGEHKKEEDGRDKHSWGRNYSSYDTRLSLPDNVVKDKIKAELKNGVLFISIPKTE 224
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS22C_SOYBN (Small heat shock protein, chloroplastic (Fragment) OS=Glycine max GN=HSP22 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 3.017e-52 Identity = 100/172 (58.14%), Postives = 130/172 (75.58%), Query Frame = 2 Query: 188 GGENKDTSVDV-HVNSGNQGTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKA-GGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 GG+NKD SV+V HV+ G+QGT E++PRRTA+DI PFG++DP P R+MRQ+LDTMDR+ EDTM FPGR+ GGG++R PWDIK+EE+EI+MRFDMPGL LVIKG H++E+ GGD SWS +++SY+T P+NCEK+KVKA LKNGVL ++I K + Sbjct: 1 GGDNKDNSVEVQHVSKGDQGTAVEKKPRRTAMDISPFGILDPWSPMRSMRQILDTMDRVFEDTMTFPGRNI--GGGEIRAPWDIKDEEHEIRMRFDMPGLAKEDVKVSVEDDMLVIKGGHKSEQEHGGDDSWSSRTYSSYDTRLKLPDNCEKDKVKAELKNGVLYITIPKTK 170 HSP 2 Score: 23.0978 bits (48), Expect = 3.017e-52 Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 3 Query: 675 YFPFPKTNGERRVLDV 722 Y PKT ER+V+DV Sbjct: 163 YITIPKTKVERKVIDV 178
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS21C_PEA (Small heat shock protein, chloroplastic OS=Pisum sativum GN=HSP21 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 4.255e-51 Identity = 105/214 (49.07%), Postives = 146/214 (68.22%), Query Frame = 2 Query: 65 PLVSREARTSIARRNVAPCSVTLPATSRKGAYRLQAVRAQAGGE--NKDTSVDVH-VNSGNQGTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 P++S++ +S+ ++ PC + P + L+ VRAQAGG+ NKD SV+VH VN +QGT ER+PRR+++DI PFGL+DP P R+MRQMLDTMDR+ ED + PGR+ GGG++R PW+IK+EE+EI+MRFDMPG+ LVIK +HR E+ GG+ WS S++ Y+T P+NCEK KVKA LK+GVL ++I K + Sbjct: 13 PILSQKPGSSV--KSTPPCMASFPLRRQLPRLGLRNVRAQAGGDGDNKDNSVEVHRVNKDDQGTAVERKPRRSSIDISPFGLLDPWSPMRSMRQMLDTMDRIFEDAITIPGRNI--GGGEIRVPWEIKDEEHEIRMRFDMPGVSKEDVKVSVEDDVLVIKSDHR-EENGGEDCWSRKSYSCYDTRLKLPDNCEKEKVKAELKDGVLYITIPKTK 221 HSP 2 Score: 21.557 bits (44), Expect = 4.255e-51 Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 3 Query: 675 YFPFPKTNGERRVLDV 722 Y PKT ER V+DV Sbjct: 214 YITIPKTKIERTVIDV 229
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS25P_ARATH (25.3 kDa heat shock protein, chloroplastic OS=Arabidopsis thaliana GN=HSP25.3 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.925e-46 Identity = 103/204 (50.49%), Postives = 129/204 (63.24%), Query Frame = 2 Query: 92 SIARRNVAPCSVTLPATSRKGAYRLQAVRAQAGGENKDTSVDVHVNSGNQGTQAERRPR-RTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGG-GQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 S++ ++ P SV+ P RK R +RAQ EN V GNQG+ E+RP+ R +D+ PFGL+DP P RTMRQMLDTMDR+ EDTM GR+R G G ++R PWDIKEEE+EIKMRFDMPGL LVIKGE + E + D SWSG S +SY T P+NCEK+K+KA LKNGVL ++I K + Sbjct: 21 SVSSKSATPFSVSFP---RKIPSR---IRAQDQRENSIDVVQQGQQKGNQGSSVEKRPQQRLTMDVSPFGLLDPLSPMRTMRQMLDTMDRMFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDS--DDSWSGRSVSSYGTRLQLPDNCEKDKIKAELKNGVLFITIPKTK 216 HSP 2 Score: 21.557 bits (44), Expect = 4.925e-46 Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 3 Query: 675 YFPFPKTNGERRVLDV 722 + PKT ER+V+DV Sbjct: 209 FITIPKTKVERKVIDV 224
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS21C_WHEAT (Small heat shock protein, chloroplastic OS=Triticum aestivum GN=HSP21 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 6.305e-42 Identity = 100/220 (45.45%), Postives = 123/220 (55.91%), Query Frame = 2 Query: 68 LVSREARTSIARRNVAPCSVTLPATSRKGAYRLQAVRAQAGGENKDTSVDVHV----NSGNQ-GTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKA-----GGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 LVSR + AR + PA G A A EN+D SVDV V N+GNQ G +RRPRR DI PFGL+DP P RTMRQMLDTMDRL +D + FP R + R PWDI E+E E+KMRFDMPGL LVI+GEH+ E GGD W S +SY+ P+ C+K++V+A LKNGVLL+S+ K + Sbjct: 10 LVSR--LSPAARLPIRAWRAARPAPLSTGGRTRPLSVASAAQENRDNSVDVQVSQAQNAGNQQGNAVQRRPRRAGFDISPFGLVDPMSPMRTMRQMLDTMDRLFDDAVGFPTRRSPAARARRRMPWDIMEDEKEVKMRFDMPGLSREEVRVMVEDDALVIRGEHKKEAGEGQGEGGDGWWKERSVSSYDMRLALPDECDKSQVRAELKNGVLLVSVPKRE 227
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS26P_ORYSJ (26.7 kDa heat shock protein, chloroplastic OS=Oryza sativa subsp. japonica GN=HSP26.7 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 1.898e-38 Identity = 104/224 (46.43%), Postives = 134/224 (59.82%), Query Frame = 2 Query: 71 VSREARTSI--ARRNVAPCSVTLPATSRKGAYRLQAVRAQAGGENKD-TSVDVHVNS--GNQ-GTQAERRPRRT-ALD-ILPFGLMDPSFPTRTMRQMLDTMDRLLEDT-MAFPGRSRAG-GGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAE-----KAGGDPSWSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 VS AR I A R P +V LP++ R Q A A EN+D T+VDVHVN GNQ G +RRPRR+ ALD I PFGL+DP P RTMRQMLDTMDR+ +D + FP R G+VR PWD+ E++ E++MRFDMPGL LVI+GEH+ E + GD W S +SY+ P+ C+K+KV+A LKNGVLL+++ K + Sbjct: 11 VSPAARLPIRAAWRRARP-TVGLPSSGRAR----QLAVASAAQENRDNTAVDVHVNQDGGNQQGNAVQRRPRRSSALDGISPFGLVDPMSPMRTMRQMLDTMDRIFDDVALGFPATPRRSLATGEVRMPWDVMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSSYDMRLALPDECDKSKVRAELKNGVLLVTVPKTE 229
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 2.113e-13 Identity = 69/209 (33.01%), Postives = 104/209 (49.76%), Query Frame = 2 Query: 71 VSREARTSIARRNVAPCSVTLPATSRKGAYRLQAVRA-QAGGENKDTSVDVHVNSGNQGTQAERRPRRTALDILPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEK-NKVKANLKNGVLLLSISK 691 + R +SIA R+ SV PA S + + AVR+ GEN D VD++ S PRR D + DP PTR++ Q+L+ MD+ +E+ + +R G R WDIKE+++ + +R DMPGL LVI+GE + E+ GG+ SG + + P+ K +++KA +KNGVL + I K Sbjct: 7 LKRLLSSSIAPRSR---SVLRPAVSSR-LFNTNAVRSYDDDGENGD-GVDLYRRSV---------PRRRG-DFFS-DVFDPFSPTRSVSQVLNLMDQFMENPLL--SATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGN--RRFTSRIGLPDKIYKIDEIKAEMKNGVLKVVIPK 195
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.052e-12 Identity = 48/132 (36.36%), Postives = 71/132 (53.79%), Query Frame = 2 Query: 299 LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPSWSGASFNSYNTPSPAPENCEK-NKVKANLKNGVLLLSISK 691 ++DP PTR++ QML+ MD++ E + +R G VR W++KE+++ + +R DMPGL LVI+GE E+ G D S G F S PE K +++KA +KNGVL + I K Sbjct: 70 ILDPFTPTRSLSQMLNFMDQVSEIPLV--SATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEE-GEDVSGDGRRFTS---RIELPEKVYKTDEIKAEMKNGVLKVVIPK 195
BLAST of DY271366 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 4.407e-11 Identity = 56/201 (27.86%), Postives = 91/201 (45.27%), Query Frame = 2 Query: 143 SRKGAYRLQAVRAQAGGENKDTSVDVHVNSGNQGTQAERRPRRTALDIL-----PFGLMDPSF-----PT--RTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLXXXXXXXXXXXXXLVIKGEHRAEKAGGDPS----WSGASFNSYNTPSPAPENCEKNKVKANLKNGVLLLSISKNQ 697 +R +L A + GE +D ++ V+ + + + PRR L G P+ PT T+ Q + M+R+ ++ P + GQV KE+++ K+R+++PGL L IKG+H+AE+ G P WS S+ YNT P++ + +KA LKNGVL L I + + Sbjct: 31 NRHNPMKLNRFMATSAGEQED-KMNTEVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFNVNPFQLM----GQV------KEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTE 220 The following BLAST results are available for this feature:
BLAST of DY271366 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271366 ID=DY271366; Name=DY271366; organism=Citrus clementina; type=EST; length=1084bpback to top |