DY271439

Overview
NameDY271439
Unique NameDY271439
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length929
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig522 contig Ccv1_Contig522:248..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_DICDI (Probable ornithine aminotransferase OS=Dictyostelium discoideum GN=oatA PE=3 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 2.466e-65
Identity = 117/217 (53.92%), Postives = 162/217 (74.65%), Query Frame = 1
Query:   16 FGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA*PT 666
            +GPL+ G +K+D+     LE++  +  D++ GF+ EPIQGEAGV++P +GYLK   +LC KYN+L++ADEIQ+GL R+GRML SDW+ ++PD+V+LGKA+ GG++P+SAVL  K+VML I+PGEHGST+GG+PLASAVA+A+LDV+RDE LAE +  LGE  R  +  I       ++ VRG+GL NA+  D     VSA+DIC+K  E G+LA PT
Sbjct:  170 YGPLMNGIIKIDYNSTQQLEEVLSQHADRVCGFIVEPIQGEAGVVVPDEGYLKKCYELCKKYNVLLVADEIQTGLCRTGRMLCSDWDGIKPDLVLLGKAISGGLLPISAVLGGKDVMLTIKPGEHGSTYGGSPLASAVAMAALDVLRDENLAENAQKLGEHFRAQISNINHP---AIQLVRGKGLLNAIVIDPN-FTVSAWDICIKFAENGLLAKPT 382          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_DROME (Ornithine aminotransferase, mitochondrial OS=Drosophila melanogaster GN=Oat PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.266e-61
Identity = 114/218 (52.29%), Postives = 167/218 (76.61%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA*PT 666
            GFGP +PG   +++ +++ALE+  K+    +  F+ EPIQGEAGV++P DGYLK VR+LC+KYN+L IADE+Q+GLAR+G++LA D+E+V+PD++ILGKAL GG+ PVSAVL + +VMLCI+PGEHGST+GGNPL   VA+A+L+V+++EKLAE +  +G+ LR  L  + +   + V  VRG+GL NA+  ++      A+++CL++KE G+LA PT
Sbjct:  190 GFGPFMPGFELIEYDNVSALEESLKDPN--VCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGDLLRNELSTLPK---DVVSVVRGKGLLNAIVINQ---KFDAWEVCLRLKENGLLAKPT 399          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAW (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MW2) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.684e-61
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    E+    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINEN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAS (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MSSA476) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.684e-61
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    E+    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINEN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAN (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain N315) GN=rocD2 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.684e-61
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    E+    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINEN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAM (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rocD2 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.684e-61
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    E+    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINEN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAC (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain COL) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 3.684e-61
Identity = 122/215 (56.74%), Postives = 154/215 (71.63%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    E+    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINEN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAAR (Ornithine aminotransferase 2 OS=Staphylococcus aureus (strain MRSA252) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.829e-60
Identity = 121/215 (56.28%), Postives = 153/215 (71.16%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGD+ AL+    ++    A  L EPIQGEAG+ IPP+GYLKA+R+LC ++N+L IADEIQ+GL RSG++ A DW+ V+PD+ ILGKALGGGV P+S VLADKEV+    PG HGSTFGGNPLA A +IA+LDVI DE L  RS  LG+  ++ L +I       +KEVRGRGLF  VE +++A P      C  +KE G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDVDALKAAINKN---TAAVLVEPIQGEAGINIPPEGYLKAIRELCDEHNVLFIADEIQAGLGRSGKLFARDWDNVKPDVYILGKALGGGVFPISVVLADKEVLDVFTPGSHGSTFGGNPLACAASIAALDVIVDEDLPGRSLELGDYFKEQLKQIDHP---SIKEVRGRGLFIGVELNESARP-----YCEALKEEGLL 362          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT_DROAN (Ornithine aminotransferase, mitochondrial OS=Drosophila ananassae GN=Oat PE=1 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 2.388e-60
Identity = 115/218 (52.75%), Postives = 163/218 (74.77%), Query Frame = 1
Query:   13 GFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGILA*PT 666
            GFGP +PG   +++ ++TALE+  K+    +  F+ EPIQGE GV++P DGYLK VR+LCSK N+L IADE+Q+GLAR+G++LA ++E+V+PD++ILGKAL GG+ PVSAVL +  VMLCI+PGEHGST+GGNPL   VA+A+L+V+++EKLAE +  +GE LR  L  + +   + V  VRG+GL NA+  ++      A+ +CLK+KE G+LA PT
Sbjct:  191 GFGPFMPGFELIEYDNVTALEEALKDPN--VCAFMVEPIQGERGVVVPSDGYLKKVRELCSKNNVLWIADEVQTGLARTGKLLAVNYEDVQPDILILGKALSGGLYPVSAVLCNDPVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGELLRSELSTLPK---DVVSVVRGKGLLNAIVINE---KYDAWKVCLKLKENGLLAKPT 400          
BLAST of DY271439 vs. ExPASy Swiss-Prot
Match: OAT2_STAS1 (Ornithine aminotransferase 2 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rocD2 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 3.119e-60
Identity = 119/215 (55.35%), Postives = 153/215 (71.16%), Query Frame = 1
Query:   10 RGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEPIQGEAGVIIPPDGYLKAVRDLCSKYNILMIADEIQSGLARSGRMLASDWEEVRPDMVILGKALGGGVIPVSAVLADKEVMLCIQPGEHGSTFGGNPLASAVAIASLDVIRDEKLAERSAHLGEELRQHLFKIQQQFPNYVKEVRGRGLFNAVEFDKTALPVSAYDICLKMKERGIL 654
            RG+GPLL G  KVDFGDI A++    E+    A  L EPIQGEAG+ +PP+GYLK +R+LC ++N+L IADEIQ+GL RSG++ A+DW+ V+PD+ ILGKALGGGV+P+S VLAD+EV+    PG HGSTFGGNPLA AV+ A+LDVI DE L  RS  LG+  +  L KI       +KEVRGRGLF  +E ++ A P      C  +KE+G+L
Sbjct:  159 RGYGPLLDGFRKVDFGDIEAVKAAINEN---TAAILIEPIQGEAGINVPPEGYLKQIRELCDEHNVLFIADEIQAGLGRSGKLFATDWDNVKPDVYILGKALGGGVLPISVVLADEEVLGVFTPGSHGSTFGGNPLACAVSNAALDVIIDEDLPGRSLELGDYFKSELEKIDHP---AIKEVRGRGLFIGIELNEAARP-----FCESLKEQGLL 362          
The following BLAST results are available for this feature:
BLAST of DY271439 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
OAT_DICDI2.466e-6553.92Probable ornithine aminotransferase OS=Dictyosteli... [more]
OAT_DROME1.266e-6152.29Ornithine aminotransferase, mitochondrial OS=Droso... [more]
OAT2_STAAW3.684e-6156.74Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAS3.684e-6156.74Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAN3.684e-6156.74Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAM3.684e-6156.74Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAC3.684e-6156.74Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT2_STAAR1.829e-6056.28Ornithine aminotransferase 2 OS=Staphylococcus aur... [more]
OAT_DROAN2.388e-6052.75Ornithine aminotransferase, mitochondrial OS=Droso... [more]
OAT2_STAS13.119e-6055.35Ornithine aminotransferase 2 OS=Staphylococcus sap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP9YP21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271439 ID=DY271439; Name=DY271439; organism=Citrus clementina; type=EST; length=929bp
GAGGCCATTCGTGGTTTTGGACCATTGTTACCTGGCCATCTTAAGGTTGA
TTTTGGTGATATAACTGCTCTAGAGAAAATCTTTAAAGAAAGTGGAGATC
AAATAGCTGGATTTCTTTTTGAACCAATTCAAGGAGAGGCTGGGGTTATA
ATTCCTCCAGATGGTTACTTGAAAGCTGTTAGAGATCTTTGCTCAAAGTA
TAACATCTTAATGATTGCTGATGAGATACAGAGTGGTTTAGCACGATCTG
GAAGAATGTTGGCCTCTGATTGGGAAGAAGTTCGCCCTGATATGGTGATA
CTAGGAAAGGCATTGGGTGGTGGAGTCATACCTGTCAGTGCAGTGCTTGC
AGACAAAGAAGTGATGCTTTGCATTCAACCTGGAGAGCATGGAAGCACCT
TCGGCGGAAATCCTTTGGCCAGTGCGGTGGCTATTGCCTCGCTGGATGTG
ATCAGAGATGAGAAACTTGCAGAGAGATCAGCGCATTTGGGAGAAGAGCT
CAGACAGCATCTTTTTAAAATTCAGCAGCAATTTCCAAACTACGTTAAAG
AGGTTCGAGGAAGAGGTTTGTTCAATGCCGTGGAGTTTGACAAGACGGCA
TTGCCTGTTTCTGCATATGACATCTGTCTAAAGATGAAGGAAAGGGGCAT
CCTTGCCTAACCCACTCCATGATACAATAGTCCCGGTTAACTCCCCCCCT
CTCCATAAATTCAATTGACCTCCAGAAGGGTCAAAGGCGCTGCATGAAGT
TTTGGAACTTGACCTGCCCAAAAAGCCGAAACCCCAACCCAGCAAAGCCC
CTGCCACCCCATGTTCCCGTTGTGGCAAAAATTAATAGGGCATAAAAATT
TAATAAATTCCCAATTCTTCCCCCCGGCAAGCCCAATTTCCCTCCCAACC
CCCTTGTTATCAAAACTTCTTGCCGTATG
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