EY832048

Overview
NameEY832048
Unique NameEY832048
TypeEST
OrganismCitrus trifoliata ()
Sequence length878
Libraries
Library NameType
Poncirus trifoliata bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY832048 vs. ExPASy Swiss-Prot
Match: Y3544_ARATH (Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana GN=At3g25440 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.195e-19
Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 2 
Query:   11 HASEHETVKVFCKPSKPGQIHEFTEEIARLSGGIPVQIIGDDTVIFYRGKNYVQP--EIMSPIDTLSKKKALEKSKYEQSLESVRRFIAMAEKELELYYRHIALYGDPNNRNPMSIMDNPSKVTQESWKFKMVER--KSLDSTYDALSPGASEAESDSTDQALSELDDYIED 514
            H  +H+T++V  K   P ++ E   E+ARL+GGI + +   +T+I YRGKNYVQP  EIMSP  TL +KKAL+KSK   +L +VR++I   E+EL+L         D  N   + + DN  +   E  K K++ER  + L+   +    G  E  +DS    + E D  +ED
Sbjct:  214 HWKKHQTLQVVIKTFTPDEVKEIAVELARLTGGIVLDVHEGNTIIMYRGKNYVQPPTEIMSPRITLPRKKALDKSKCRDALRAVRKYIPRLEQELQLLQAQAETKRDYTN---VKVDDNQER--SEELK-KIIERSEECLEDEQEEDEAGL-ELATDSDLSDIFETDSELED 378
The following BLAST results are available for this feature:
BLAST of EY832048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3544_ARATH4.195e-1937.79Uncharacterized CRM domain-containing protein At3g... [more]
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Properties
Property NameValue
Genbank descriptionPT11-C2-300-090-H06-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY832048 ID=EY832048; Name=EY832048; organism=Citrus trifoliata; type=EST; length=878bp
TTGCTCGACCCACGCGTCCGAACATGAAACTGTCAAGGTCTTCTGCAAGC
CTTCTAAACCTGGCCAGATACATGAGTTCACCGAGGAAATTGCCAGATTA
AGTGGTGGAATCCCCGTACAGATAATTGGAGATGATACTGTAATCTTTTA
CCGAGGGAAGAATTATGTGCAGCCAGAAATAATGTCACCTATAGATACAT
TGTCCAAGAAAAAGGCACTTGAAAAATCAAAATATGAGCAGTCACTGGAG
TCTGTTAGGCGCTTTATTGCCATGGCGGAGAAAGAATTGGAGCTCTATTA
CAGGCACATAGCACTTTATGGTGACCCAAATAATCGGAATCCCATGTCAA
TCATGGACAATCCGTCTAAAGTTACCCAGGAATCATGGAAATTCAAAATG
GTGGAAAGGAAAAGCCTAGACTCCACCTATGATGCTTTATCTCCAGGTGC
CTCAGAGGCAGAAAGTGATTCCACTGATCAAGCACTATCAGAACTTGATG
ATTATATTGAAGACGAGGGCTTATCCACAAGTGAATCAGATTCTCAAGAT
GACAGCTCATCTGATTTTGACTCTAAGGAAAGCCAAGTAAGCTCTTCTAG
AATGCAAGAGCTCTCCTTTACGATGTCAGGTTCATCATCGATGTCTAAAA
CCTTATATGATTCTAGTAATCCAAATTTCCTAGGACAGAAATAGAGACCT
CAAATTTTAATTCAAAAAATCCTTTTTACTAGGCCTAGGTTGGGTATGCT
CCTACCTAAATTTTTTGGTTGGGAAAAAATTTTTTGGAATTCCAATTCCA
ACCGAAGGGGAGAATTATTGGGAAAGAAAGAAAAAAAAAGGGCCGGCCGC
TTTTAGAAGGGATCCAGGGCGTTGCGGG
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