EY832782

Overview
NameEY832782
Unique NameEY832782
TypeEST
OrganismCitrus trifoliata ()
Sequence length910
Libraries
Library NameType
Poncirus trifoliata bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 4.095e-81
Identity = 154/218 (70.64%), Postives = 171/218 (78.44%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNL 834
            MAQAVE+WYKQMPIITR+YLTAA++TTVGCSLDIISP+NL L+PTLVVK YQ+WRL+TNFL+FRK            ARYCKLLEENSFRG+TADFLYMLLFGA+ LTG VLIGGMIPYLS SFAKIIFLSNSLT MMVYVWSKQNP+IHMSF G F   ++ L    LG S+  GASAW  LLGMI GHA YFL + Y +      PLKTP F K L
Sbjct:    1 MAQAVEEWYKQMPIITRSYLTAAVITTVGCSLDIISPYNLYLNPTLVVKQYQYWRLVTNFLYFRKMDLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGHAYYFLAEVYPRMTNR-RPLKTPSFLKAL 217          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2)

HSP 1 Score: 301.212 bits (770), Expect = 5.348e-81
Identity = 156/219 (71.23%), Postives = 171/219 (78.08%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSK-EDRAPGPLKTPFFYKNL 834
            MAQAVE+WYKQMPIITR+YLTAA+VTTVGCSL+IISP+NL L+PTLVVK YQFWRL+TNFL+FRK            ARYCKLLEENSFRG+T DFLYMLLFGAT LTG VLIGGMIPYLS SF+KIIFLSNSLT MMVYVWSKQNP+IHMSF G F   ++ L    LG S+  GASAWG  LGMI GHA YFL   Y +  DR   PLKTP F K L
Sbjct:    1 MAQAVEEWYKQMPIITRSYLTAAVVTTVGCSLEIISPYNLYLNPTLVVKQYQFWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGKTTDFLYMLLFGATVLTGIVLIGGMIPYLSVSFSKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGHAYYFLAFVYPRMTDRR--PLKTPSFLKAL 217          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.991e-77
Identity = 144/218 (66.06%), Postives = 167/218 (76.61%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNL 834
            MAQAVE+WY+QMPIITR+YLTAA+VTTVGC+L+IISP++L L+P LVV+HY+ WRL+TNFL+FRK            ARYCKLLEENSFRGRTADF YMLLFGAT LTG VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSF G F   ++ L    LG S+  G+S W  LLGMI GH  YFL+  Y +      PLKTP F K L
Sbjct:    1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRM-TGRRPLKTPSFIKAL 217          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 7.991e-77
Identity = 144/218 (66.06%), Postives = 167/218 (76.61%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNL 834
            MAQAVE+WY+QMPIITR+YLTAA+VTTVGC+L+IISP++L L+P LVV+HY+ WRL+TNFL+FRK            ARYCKLLEENSFRGRTADF YMLLFGAT LTG VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSF G F   ++ L    LG S+  G+S W  LLGMI GH  YFL+  Y +      PLKTP F K L
Sbjct:    1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRM-TGRRPLKTPSFIKAL 217          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2)

HSP 1 Score: 285.034 bits (728), Expect = 3.966e-76
Identity = 143/218 (65.60%), Postives = 166/218 (76.15%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNL 834
            MAQAVE+WY+QMPIITR+YLTAA+VTTVGC+L+IISP++L L+P LVV+HY+ WRL+TNFL+FRK            ARYCKLLEENSFRGRTADF YMLLFGAT LT  VLIGGMIPY+SE+FA+I+FLSNSLT MMVYVWSK NPFIHMSF G F   ++ L    LG S+  G+S W  LLGMI GH  YFL+  Y +      PLKTP F K L
Sbjct:    1 MAQAVEEWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKMDLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRM-TGRRPLKTPSFIKAL 217          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.637e-39
Identity = 83/208 (39.90%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  205 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYK 828
            Y Q+P ++R Y TA ++TT    L++I+PF L  +P L+ KH+Q WRLITNFLFF               RYC++LEE SFRGRTADF++M LFG   +T           L   F  ++FL  + T+M+VYVWS++NP++ M+FFG     +  L    +G S+  G S    LLG+  GH  +FL+  +  +      LKTP   K
Sbjct:   10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILK 206          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 8.637e-39
Identity = 83/208 (39.90%), Postives = 117/208 (56.25%), Query Frame = 1
Query:  205 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYK 828
            Y Q+P ++R Y TA ++TT    L++I+PF L  +P L+ KH+Q WRLITNFLFF               RYC++LEE SFRGRTADF++M LFG   +T           L   F  ++FL  + T+M+VYVWS++NP++ M+FFG     +  L    +G S+  G S    LLG+  GH  +FL+  +  +      LKTP   K
Sbjct:   10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILK 206          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 1.473e-38
Identity = 82/210 (39.05%), Postives = 118/210 (56.19%), Query Frame = 1
Query:  205 YKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNL 834
            Y Q+P ++R Y TA ++TT    L++I+PF L  +P L+ KH+Q WRLITNFLFF               RYC++LEE SFRGRTADF++M LFG   +T           L   F  ++FL  + T+M+VYVWS++NP++ M+FFG     +  L    +G S+  G S    LLG+  GH  +FL+  +  +      LKTP   + +
Sbjct:   10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGFNFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGGFLMT-----------LFGLFVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDIFPNQPGGIRILKTPSILRTI 208          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.599e-38
Identity = 87/221 (39.37%), Postives = 125/221 (56.56%), Query Frame = 1
Query:  181 MAQAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNLVWG 843
            MAQ  EDWYK +PI+T+ Y+T  +VT+V   L ++ P  L L+  LV   Y+FWRL TNF F+ +             R+ +LLEE+SFRGR+AD+L+M +FG+  L    LI     + ++   K++FL+ S+  M++YVWS++NP +H+SF G F   +  L    L +           LLG + GHA YFL+  Y         LKTP F KNL+ G
Sbjct:    1 MAQPFEDWYKNLPIVTKIYMTGCVVTSVSVYLGLVGPLRLYLNFPLVFGKYEFWRLFTNFFFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLL----LIMDAFLFYTKIVTKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNR-RLLKTPGFLKNLMDG 216          
BLAST of EY832782 vs. ExPASy Swiss-Prot
Match: DERL3_BOVIN (Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 4.740e-37
Identity = 83/217 (38.25%), Postives = 119/217 (54.84%), Query Frame = 1
Query:  187 QAVEDWYKQMPIITRTYLTAAIVTTVGCSLDIISPFNLCLHPTLVVKHYQFWRLITNFLFFRKXXXXXXXXXXXXARYCKLLEENSFRGRTADFLYMLLFGATFLTGTVLIGGMIPYLSESFAKIIFLSNSLTLMMVYVWSKQNPFIHMSFFGPFYIYSSLLTMGALGISVFGGASAWGGLLGMIPGHA*YFLKKGYSKEDRAPGPLKTPFFYKNLV 837
            Q +   + Q+P +TRTY  A ++TT    L+++SPF L  +P LV + +Q WRLITNFLFF               RYC++LEE SFRGRTADF++M LFG   +T   L+G            + FL  +LT M+VYVWS+++P + ++FFG     +  L    +G+ +  G S    LLG+  GH  YFL+  +  +      L TP F K L+
Sbjct:    4 QGLATEFLQVPAVTRTYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITNFLFFGPLGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLLG-----------SLFFLGQALTAMLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYFLEDVFPNQPGGKRLLLTPSFLKLLL 209          
The following BLAST results are available for this feature:
BLAST of EY832782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
DER22_ARATH4.095e-8170.64Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 ... [more]
DER21_ARATH5.348e-8171.23Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 ... [more]
DERL2_ORYSJ7.991e-7766.06Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 P... [more]
DER22_MAIZE7.991e-7766.06Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1[more]
DER21_MAIZE3.966e-7665.60Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2[more]
DERL2_PONAB8.637e-3939.90Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1[more]
DERL2_HUMAN8.637e-3939.90Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1[more]
DERL2_MOUSE1.473e-3839.05Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2[more]
DERL2_DICDI5.599e-3839.37Probable derlin-2 homolog OS=Dictyostelium discoid... [more]
DERL3_BOVIN4.740e-3738.25Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionPT11-C2-300-097-B09-CT.F Poncirus trifoliata bark, greenhouse plant Citrus trifoliata cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY832782 ID=EY832782; Name=EY832782; organism=Citrus trifoliata; type=EST; length=910bp
CGGACGCGTGGGATTGAAAGCTCTCTCCCGATCTATCTCCACAATCAGAA
GCCCCCTTTTTTTTTCACCACTTCACTCAGAAATCTTTAAATTTTCAAAA
AAAAAAAAAAAAAAATCAGCACACTTTCAGGGCTGTAGAGATAGATAGAT
AAACCATATAGTCAAAAAAATTAAAAGAAAATGGCTCAAGCTGTTGAAGA
TTGGTACAAACAGATGCCTATCATCACCCGCACGTATCTCACAGCCGCTA
TCGTCACCACCGTCGGCTGCTCTCTCGATATAATATCTCCTTTTAATCTG
TGCTTGCACCCAACGTTAGTGGTTAAGCATTATCAGTTTTGGCGACTTAT
CACCAATTTTCTCTTCTTCCGGAAAATGGATTTAGATTTTTTGTTCCATA
TGTTTTTTCTCGCACGATACTGCAAGCTTCTTGAAGAGAATTCCTTCAGG
GGAAGGACTGCAGATTTCTTGTACATGCTTTTATTTGGAGCCACTTTTCT
AACCGGCACTGTTCTTATTGGGGGGATGATACCTTACTTGTCAGAATCAT
TTGCAAAAATCATTTTCCTTAGCAATTCATTGACACTCATGATGGTTTAT
GTATGGAGCAAACAAAATCCTTTCATCCACATGAGTTTTTTTGGGCCTTT
TTACATTTACAGCAGCTTACTTACCATGGGTGCTCTTGGGATCTCAGTCT
TTGGTGGCGCTAGCGCTTGGGGGGGATTGCTGGGGATGATACCCGGCCAT
GCCTAATATTTTCTCAAAAAAGGTTATTCCAAGGAGGACAGGGCCCCCGG
GCCCTTAAAAACCCCATTTTTTTATAAAAACCTGGTTTGGGGAGGGAGGG
GAAAAGGGGAAACCCGGCCCGGAAAGGGGGAAATTTGGTCCCCCCCCCTG
GCAAAGGGAA
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