DY305029

Overview
NameDY305029
Unique NameDY305029
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1278
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_SOLLC (Histone H4 OS=Solanum lycopersicum PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 8.157e-23
Identity = 61/102 (59.80%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ DS T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_SOLCH (Histone H4 OS=Solanum chacoense PE=3 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 8.157e-23
Identity = 61/102 (59.80%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ DS T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_CAPAN (Histone H4 OS=Capsicum annuum PE=3 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 8.157e-23
Identity = 61/102 (59.80%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ DS T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_SILLA (Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_FLATR (Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
[Close]
BLAST of DY305029 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.817e-22
Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 2 
Query:   92 GAWEGRQGVGKGRSRASPDGSSR*HFREWQSPQSRRLARLGGVKRITGLIYQETLGVLKIFLENVLPDSGT*AEHARRNTVTAMDVLYSLKTQGTTLDGFGG 397
            G  +G +G+GKG ++       R + +    P  RRLAR GGVKRI+GLIY+ET GVLKIFLENV+ D+ T  EHARR TVTAMDV+Y+LK QG TL GFGG
Sbjct:    3 GRGKGGKGLGKGGAKRHRK-VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 103
The following BLAST results are available for this feature:
BLAST of DY305029 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SOLLC8.157e-2359.80Histone H4 OS=Solanum lycopersicum PE=3 SV=2[more]
H4_SOLCH8.157e-2359.80Histone H4 OS=Solanum chacoense PE=3 SV=3[more]
H4_CAPAN8.157e-2359.80Histone H4 OS=Capsicum annuum PE=3 SV=3[more]
H4_SILLA1.817e-2258.82Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3[more]
H4_PEA1.817e-2258.82Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_MAIZE1.817e-2258.82Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE1.817e-2258.82Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
H4_FLATR1.817e-2258.82Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3[more]
H4_EUCGL1.817e-2258.82Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ1.817e-2258.82Histone H4 OS=Chelidonium majus PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionKN0AAH2AA01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305029 ID=DY305029; Name=DY305029; organism=Citrus clementina; type=EST; length=1278bp
TGCCGAATTCGGCACGAGGCAAAAAAGTAAAATTGTCACGAATCACTCTG
ATTTATTCATCAGACACGCAATATCAGAGAAAAATTATGTCGGGGCGTGG
GAAGGGAGGCAAGGGGTTGGGAAAGGGAGGAGCAGAGCGTCACCGGATGG
TTCTTCACGATAACACTTCAGGGAATGGCAAAGCCCGCAATCCAGGCGTC
TGGCTCGTCTGGGGGGGGTGAAGCGGATCACTGGGTTGATCTACCAGGAG
ACACTTGGGGTTCTGAAGATCTTTTTGGAGAACGTCCTCCCCGACTCCGG
GACTTAGGCTGAGCACGCTCGAAGGAACACTGTGACCGCCATGGACGTCC
TGTACTCGCTCAAGACGCAGGGTACGACTCTCGATGGGTTTGGTGGTTAA
ACAAATTGGGATGTCTTGTTTGTGATGGTTGCACACAGATAAATCCTGCT
GGCAACAACTTTTTGTGGTTCTGTTTCTGCGGCTACGCACTTGAGCGTTC
TCCTTCCGGCTGATTGGGAATCTTGATTTACTTTGGTAATGACTGTTTTC
ACTTGGCCGGATACTTACCCCTAGCACTTTTGGTATCACTCCCTATAGAT
GAGGTGTGAGCTTCGGCGTCATACAAGAAGAATCAAAGAACCACAGGGCC
GCAGCTCCTTCCACGGCTTTGTTGGGCGCGCCAGCACCACCGTCGGATGC
TCCTGGACTGAGCGCCGACTCACTGTCACAAGGTCTATCTGTCGCCGACT
ACTAGAGCTGCGCACACACATCCTTACTGCGCATACATGATGGGCGGGTA
TGCATTGCGATGTGGTCTGCTAGCTTTGATCTTCTACAGAGAGAAGGTAC
GGGCCATAGTTAATTTGATACTCTTTGTTTAAAATTTTACCCCACATGTT
TACTAAGTCTATTACACTTTTAAACATATATCTTAAAATCTTCGCTTCCC
AAAAAAAAAAAAAAAAAAAAACCCGAGAGGGGGGGCCCGGGATCCTTCTT
GCTCTGGAAATGAAGTTCTTATATTAAAAAAAGGGGGGCTTCCTTTATAA
CAAGGGGGGGAAAGGAAAAAAAAACTTGGGGGGTTAAGCCCCCATTAAAA
CCTTCTTTGCAAGCACCCCCTCCCCCATTTTTTTCCTGGGGGGGGCGTAA
GGGGCCCGCGAAAAAGGGCCCCCAACCACGCGGAGACCCCCCCTCTTTCA
CCAGAGGCCCCTCCCCGCCAACCTCTTTAGGAGAAGTTGAGGGGGGGGGG
GGGGGGGAGAAAAAAACGTTGTACATAG
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