DY305100

Overview
NameDY305100
Unique NameDY305100
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1265
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305100 vs. ExPASy Swiss-Prot
Match: RHA2B_ARATH (RING-H2 zinc finger protein RHA2b OS=Arabidopsis thaliana GN=RHA2B PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 1.424e-11
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 1 
Query:  685 LSYVEEFRNQNPAIKYETLLHCEDAEHDCSVCLTEFEPQSDINNLSCGHLFHKVCLEKWLGLLNVTCPLCRTPLIPEFEE 924
            LS + +  N N    Y    + ++A  DC VCL++ +   ++  L C H+FHK CLE WL  LN  CPLCR+PL+P   +
Sbjct:   49 LSVLADQLNLNRLFSYR---YSDNAASDCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWLQHLNFNCPLCRSPLLPHHHQ 125
The following BLAST results are available for this feature:
BLAST of DY305100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RHA2B_ARATH1.424e-1140.00RING-H2 zinc finger protein RHA2b OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2BF01RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305100 ID=DY305100; Name=DY305100; organism=Citrus clementina; type=EST; length=1265bp
GAAAACGTTAAACAACTACTTGCACATGAGATAGTGTTCTTAGTCTTTTA
GATAGACTAAGAAATTTCAGCTCGTCCTAATCTTATTAAACGGTTCTTGA
TATTTCATCATCGACCCCAACTTTGGCTGCAGTGTTGTTTTGATGCCTCG
GATTTTATGATCATGGGTTGGATCATTTGGATTTCTGATAAGATGATTTC
TCAGCTGGGGTTCTGGGAATTTTATGAGCTTTCTTTTATTCCTTCGAAGG
TAGCTTATATTGTTTGATGTTGGTTTGTTGCAGGTTGGAATTGCTATCTT
CTTTTGGCTCTTTTTCAGGATTCTGCAGTCATCATTTTTCCTTTTTAAAA
ATTTTCGCTTCTCAGATATCAAGGAAGCAGTCACAAGATTTTGCTTGATT
TCTGATTCAGTATCTCAAATTTAGTACAAAATTGGGTATCTGTAAATTTA
AAATTTTAATTCGAAAACATGGGCCTCGCTAGTATGCCGTCCGCATCAGA
AGGAATGCTATGCTTGATTCTAATGAACACTGCTATGTCAATCTCAATCG
TCAAAGGCATATTCAGATCAATACTCAAGGTTGTCGGTTTCCAGCTTGCA
GACTCATCATCGCCACCGTATTCATATTTCGCATCACCTCAAGTTGTCTC
CGCAGAGCCATATGATGTAAATTTAAGTCCTCCCCTTAGCTATGTTGAGG
AGTTCCGAAACCAGAACCCTGCAATCAAGTATGAAACATTGCTCCATTGT
GAAGATGCAGAGCATGACTGTTCTGTGTGTTTGACCGAGTTTGAGCCTCA
ATCTGATATCAATAACTTGTCTTGTGGACATTTGTTTCATAAAGTGTGCT
TGGAGAAGTGGCTGGGACTATTGAATGTTACGTGCCCGCTTTGCAGGACA
CCTCTAATTCCTGAGTTTGAAGAACAATCCTCTTGCTTCTGGGTGAGAGT
GTTTTATGAACTTGTCTAGTTTAGAGAAACTTCCATGGTCGGCATGATAT
GTTACGGGTATTTACTAATGCACTGGGCCGGAAGTGTTTGGTGGTTTACC
CCCCTTCCAGTTGATGTAAAACATTCTGCGCGGTCTCTTTTTTTTTGAAN
NNCNANGAAAAAAAAAATACACTCTTTTGGTGTGTGTATTATGGTGGGGG
GGTATCTCCCACAAGCACGACTCTGCATATGAGAGAAAATCGTAAAGGAG
GGGGGGGAGCGCTACTTTGATCAATAAAATTTGCTCGGTCTCACATTTTA
TATCACTATGTGCGT
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