DY305105

Overview
NameDY305105
Unique NameDY305105
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1249
Libraries
Library NameType
PhII-III-Vesicles1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY305105 vs. ExPASy Swiss-Prot
Match: ESCA_ARATH (Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana GN=ESC PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 2.727e-15
Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = 2 
Query:  458 RPKRSPASDSQAL-KRSRGRPPGTGRKQQLATLGEWMNSSAGIAFAPHVISIGVGEDIVAKMLSFSQQRPRVVCILSGRGTVSSVTLRQPAT---------SVPTVTYEGRFEILCLSGSFLLAEDGSPRDRTGGVSAFLSSPDGHVFGG 877
            RP   P + S A  KR RGRPPG+  K +   +   +   +  A   HV+ +  G DIV  + +++++R R V +L G GTVS+VTLRQP T             VT  GRFEIL L+G+ +L     P    GG+S FL+   G V GG
Sbjct:   72 RPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPII---VTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVVTLHGRFEILSLTGT-VLPPPAPP--GAGGLSIFLAGGQGQVVGG 215
The following BLAST results are available for this feature:
BLAST of DY305105 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ESCA_ARATH2.727e-1538.67Putative DNA-binding protein ESCAROLA OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAH2BF10RM1 PhII-III-Vesicles1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305105 ID=DY305105; Name=DY305105; organism=Citrus clementina; type=EST; length=1249bp
GGTGTTAGGGAGATCAGGATCTTGTGTGTATTTAGTTTAAGATTTTAGCT
TAAGTGGCTTAATAGACTCATTTTCTAGCTACCCAAAAAGAAAAAAAATT
CATTTTCTACTTAGTAAATGCATGGACGGAAGAGAAGCTATGGTTGCATC
AGGGGGTGTCTCTGGTCCCTATTACATTCAACAACATAGAGGAGCATTCA
GTGGTTCTCATTCAGCAACACAATCTGGTTTAATGCAAACCCCACCTGGG
TTTAGATCCTCGTCAAATCTTAACATTCCAACTCAACCAAATGTGGGATC
GACATTTGCAGTTGAGCCCAAACATGTCAATTTTGGCCATAACATGAGTG
TGCCATCCGGGGTGCCACTAAGTGATCCAGTGAAGAAGAAGAGAGGTAGA
CCCCGCAAATATGCCCCTGATGGGCAGGTTTCCTTGGGGCTTTCGCCATT
GCCAGCCAGGCCAAAGCGTTCTCCGGCATCTGATTCGCAGGCCTTGAAAC
GGAGTAGAGGGCGGCCTCCTGGGACAGGCAGGAAGCAGCAGTTGGCTACT
CTTGGTGAATGGATGAATAGTTCAGCTGGAATTGCTTTTGCACCGCATGT
GATCTCCATTGGAGTTGGAGAGGACATTGTGGCTAAAATGTTGTCATTTT
CACAACAGAGGCCAAGGGTTGTGTGCATCTTGTCAGGCCGTGGTACAGTT
TCTTCAGTAACACTCCGTCAGCCTGCAACTTCAGTGCCCACCGTCACCTA
TGAGGGCCGTTTCGAGATATTATGCCTGTCTGGTTCATTCTTACTTGCTG
AAGATGGCAGTCCTCGTGATCGAACTGGTGGTGTAAGTGCTTTCCTTTCA
AGTCCTGATGGTCACGTATTCGGTGGGTGGAATTGCTGTGCTTATCGCAG
CCAGCCCAGTTCAGGGGGGTGGGTATGCATTTTTGTATATGGGTGGTTCT
AAAATCAAAGAGCCAACCAGGTTGCGGCCCCCTGAAAAGGACCAAAAATT
CCACGCCCGCCCACCGAATTAATAAATCAACCTACCCAAATTTAACCCCC
CTGCCCCCCCCAAAAATTTTTTCCCCCCTTCCCGCAATGAAAAGCCCCGG
GTCCCGGGGTTTTCCAAAAAAGCCTTAAATCTGAAAAAAACCCCCCCCAC
CCCCAAAATTTTTGAACCCCGAAACCTTGGGGGAAAAAGTAGAAAAATTT
TTTTCCCGGGCCAACAAACAACAAAACAAAAATGGGGGGGTGTTTTTTT
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