DY305414
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_ANTMA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Antirrhinum majus GN=WAXY PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 2.772e-37 Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
GFTGF MG+F+ ++TTV +ALA G++A EM++N MA DLSWKGP+K WE+ LL+L V+G EPG+DGE+IAPLAKENVATP
Sbjct: 515 GFTGFHMGAFNVECATVDPADVQKIATTVERALAAYGSVAYKEMIQNCMAQDLSWKGPAKNWEKMLLSLGVSGSEPGVDGEEIAPLAKENVATP 608 HSP 2 Score: 67.781 bits (164), Expect = 2.772e-37 Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
+I ADF+L+P R EPCGLIQLHAM YGT+PI ASTGGLVD
Sbjct: 469 MITAGADFMLVPSRFEPCGLIQLHAMRYGTIPICASTGGLVD 510
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_SOLTU (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Solanum tuberosum GN=WAXY PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.765e-36 Identity = 53/94 (56.38%), Postives = 66/94 (70.21%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G+TGF MG+F+ + TTV +ALA GTLA AEM+KN M+ +LSWK P+KKWE LL L +G EPG++GE+IAPLAKENVATP
Sbjct: 514 GYTGFHMGAFNVECDVVDPADVLKIVTTVARALAVYGTLAFAEMIKNCMSEELSWKEPAKKWETLLLGLGASGSEPGVEGEEIAPLAKENVATP 607 HSP 2 Score: 68.1662 bits (165), Expect = 1.765e-36 Identity = 32/42 (76.19%), Postives = 35/42 (83.33%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
+I ADF+L+P R EPCGLIQLHAM YGTVPI ASTGGLVD
Sbjct: 468 MITAGADFMLVPSRFEPCGLIQLHAMRYGTVPICASTGGLVD 509
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_IPOBA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Ipomoea batatas GN=WAXY PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.142e-35 Identity = 53/94 (56.38%), Postives = 67/94 (71.28%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G+TGF MG+F+ + TTV +ALA GTLA EM+KN M+ +LSWKGP+K WE LL+L VAG EPG++G++IAPLAKENVATP
Sbjct: 515 GYTGFHMGAFNVDCETVDPEDVLKVITTVGRALAMYGTLAFTEMIKNCMSQELSWKGPAKNWETVLLSLGVAGSEPGVEGDEIAPLAKENVATP 608 HSP 2 Score: 62.3882 bits (150), Expect = 7.142e-35 Identity = 31/42 (73.81%), Postives = 33/42 (78.57%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
+I ADF+LIP R EPCGLIQLHAM YGT I ASTGGLVD
Sbjct: 469 MITAGADFMLIPSRFEPCGLIQLHAMRYGTPCICASTGGLVD 510
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_MANES (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Manihot esculenta GN=WAXY PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.487e-34 Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G+TGF MG+ + TV +AL T T AL EM+ N MA DLSWKGP++ WE+ LL+L+V G EPG +GE+IAPLAKENV TP
Sbjct: 515 GYTGFQMGALHVECDKIDSADVAAIVKTVARALGTYATAALREMILNCMAQDLSWKGPARMWEKMLLDLEVTGSEPGTEGEEIAPLAKENVPTP 608 HSP 2 Score: 70.0922 bits (170), Expect = 3.487e-34 Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
+I ADF+L+P R EPCGLIQLHAM YGTVPIVASTGGLVD
Sbjct: 469 MITAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 510
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_ARATH (Probable granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Arabidopsis thaliana GN=WAXY PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.702e-33 Identity = 47/94 (50.00%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G+TGF +G F+ + V +A+A GT A+ EM+KN M D SWKGP++ WE+ LL+L VAG E G +GE+IAPLAKENVATP
Sbjct: 517 GYTGFHIGRFNVKCEVVDPDDVIATAKAVTRAVAVYGTSAMQEMVKNCMDQDFSWKGPARLWEKVLLSLNVAGSEAGTEGEEIAPLAKENVATP 610 HSP 2 Score: 70.4774 bits (171), Expect = 1.702e-33 Identity = 33/42 (78.57%), Postives = 36/42 (85.71%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
+I ADFI++P R EPCGLIQLHAM YGTVPIVASTGGLVD
Sbjct: 471 MITAGADFIIVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 512
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_PEA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Pisum sativum PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.870e-32 Identity = 46/94 (48.94%), Postives = 60/94 (63.83%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G+TGF G F ++ TV +AL T GT A+ +++ N MA + SWK P+K WE+ LLNL+V G GIDG++IAPLAKENVATP
Sbjct: 510 GYTGFHAGPFDVECEDVDPDDVDKLAATVKRALKTYGTQAMKQIILNCMAQNFSWKKPAKLWEKALLNLEVTGNVAGIDGDEIAPLAKENVATP 603 HSP 2 Score: 68.1662 bits (165), Expect = 6.870e-32 Identity = 31/37 (83.78%), Postives = 34/37 (91.89%), Query Frame = 1
Query: 19 ADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
ADFI+IP R EPCGL+QLHAM YGTVPIV+STGGLVD
Sbjct: 469 ADFIVIPSRFEPCGLVQLHAMPYGTVPIVSSTGGLVD 505
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1B_HORVU (Granule-bound starch synthase 1b, chloroplastic/amyloplastic (Fragment) OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 5.686e-31 Identity = 49/94 (52.13%), Postives = 61/94 (64.89%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G TGF MGSF+ + + V +AL T M++N MA DLSWKGP+KKWEE LL+L V G +PGI+GE+IAPLAK+NVATP
Sbjct: 472 GVTGFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP 565 HSP 2 Score: 60.8474 bits (146), Expect = 5.686e-31 Identity = 28/37 (75.68%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 19 ADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
ADFI+IP R EPCGLIQL M YG VPI +STGGLVD
Sbjct: 431 ADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVD 467
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_ORYSA (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Oryza sativa GN=WAXY PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.887e-28 Identity = 49/94 (52.13%), Postives = 60/94 (63.83%), Query Frame = 2
Query: 143 GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
G TGF MG S ++TT+ +A+ GT A EM++N M DLSWKGP+K WE LL L VAG EPG++GE+IAPLAKENVA P
Sbjct: 513 GKTGFHMGRLSVDCKVVEPSDVQKVATTLKRAIKIVGTPAYNEMVRNCMNQDLSWKGPAKNWENVLLGLGVAGSEPGVEGEEIAPLAKENVAAP 606 HSP 2 Score: 51.9878 bits (123), Expect = 1.887e-28 Identity = 26/42 (61.90%), Postives = 28/42 (66.67%), Query Frame = 1
Query: 4 LIRHEADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
LI AD + +P R EPCGLIQL M YGT ASTGGLVD
Sbjct: 467 LIMAGADVLAVPSRFEPCGLIQLQGMRYGTPCACASTGGLVD 508
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_SORBI (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Sorghum bicolor GN=WAXY PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 3.199e-28 Identity = 53/99 (53.54%), Postives = 65/99 (65.66%), Query Frame = 2
Query: 128 TLME*GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
T++E G TGF MG S ++TT+ +A+ GT A EM+KN M DLSWKGP+K WE LL+L VAG EPGI+GE+IAPLAKENVA P
Sbjct: 511 TIIE-GKTGFHMGRLSVDCNVVEPADVKKVATTLKRAIKVVGTPAYEEMVKNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGIEGEEIAPLAKENVAAP 608 HSP 2 Score: 48.1358 bits (113), Expect = 3.199e-28 Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 19 ADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
AD + + R EPCGLIQL M YGT ASTGGLVD
Sbjct: 474 ADLLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVD 510
BLAST of DY305414 vs. ExPASy Swiss-Prot
Match: SSG1_MAIZE (Granule-bound starch synthase 1, chloroplastic/amyloplastic OS=Zea mays GN=WAXY PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.196e-27 Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 2
Query: 128 TLME*GFTGFLMGSFSGXXXXXXXXXXXXMSTTVLKALATCGTLALAEMMKNGMAHDLSWKGPSKKWEETLLNLKVAGREPGIDGEQIAPLAKENVATP 424
T++E G TGF MG S ++TT+ +A+ GT A EM++N M DLSWKGP+K WE LL+L VAG EPG++GE+IAPLAKENVA P
Sbjct: 508 TIIE-GKTGFHMGRLSVDCNVVEPADVKKVATTLQRAIKVVGTPAYEEMVRNCMIQDLSWKGPAKNWENVLLSLGVAGGEPGVEGEEIAPLAKENVAAP 605 HSP 2 Score: 47.7506 bits (112), Expect = 1.196e-27 Identity = 23/37 (62.16%), Postives = 25/37 (67.57%), Query Frame = 1
Query: 19 ADFILIPDRCEPCGLIQLHAMLYGTVPIVASTGGLVD 129
AD + + R EPCGLIQL M YGT ASTGGLVD
Sbjct: 471 ADVLAVTSRFEPCGLIQLQGMRYGTPCACASTGGLVD 507 The following BLAST results are available for this feature:
BLAST of DY305414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >DY305414 ID=DY305414; Name=DY305414; organism=Citrus clementina; type=EST; length=679bpback to top |