DY305431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO1_MOUSE (Transportin-1 OS=Mus musculus GN=Tnpo1 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.808e-27 Identity = 51/124 (41.13%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 384 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO1_HUMAN (Transportin-1 OS=Homo sapiens GN=TNPO1 PE=1 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.808e-27 Identity = 51/124 (41.13%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 384 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO1_BOVIN (Transportin-1 OS=Bos taurus GN=TNPO1 PE=2 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 1.808e-27 Identity = 51/124 (41.13%), Postives = 85/124 (68.55%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 384 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NPSG + +F C A+ASW + ++L + C++LHG+K + + W + P+K++L+ + Sbjct: 773 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASWINPK-DDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF 895
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO2_MOUSE (Transportin-2 OS=Mus musculus GN=Tnpo2 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 7.598e-26 Identity = 50/124 (40.32%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 13 KSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 384 K+L+EN+AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG+K + W Q P +K++L+ + Sbjct: 762 KTLLENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEENWQQFSEQFPPLLKERLAAF 884
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO2_HUMAN (Transportin-2 OS=Homo sapiens GN=TNPO2 PE=1 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 1.584e-23 Identity = 50/134 (37.31%), Postives = 82/134 (61.19%), Query Frame = 1 Query: 13 KSLIENS----------AITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSKY 384 K+L+EN+ AIT+GRL +VCP+ V+P ++ F++PWC +L IRD+ EK+ AFRG+C M+ NP G + +F C A+ASW + ++L + ++LHG+K + W Q P +K++L+ + Sbjct: 762 KTLLENTGRLTSPSAIPAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICMMIGVNPGGVVQDFIFFCDAVASWVSPK-DDLRDMFYKILHGFKDQVGEDNWQQFSEQFPPLLKERLAAF 894
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: TNPO_DICDI (Transportin OS=Dictyostelium discoideum GN=tnpo PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 6.230e-20 Identity = 47/125 (37.60%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 7 LNKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGAWDQCMSALEPPVKDKLSK 381 LN+ ++EN+A+T+GRL V P +SP ++ F+Q WC+A+ DD EK+ AFRG+ ++ NP+GAL LV++C A+ASW +++ +L+ ++LH YK + G W Q + +++ L++ Sbjct: 799 LNRGVLENTAVTIGRLGIVSPADISPFVDKFIQCWCMAIRRKTDDIEKDSAFRGMWLIINNNPNGALRHLVYICDAVASWDKMQ-PDLYEAYFKLLHMYKTSM-GGVWAQFYNQFPEQLREILNE 921
BLAST of DY305431 vs. ExPASy Swiss-Prot
Match: IMB2_SCHPO (Importin subunit beta-2 OS=Schizosaccharomyces pombe GN=kap104 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.643e-12 Identity = 41/106 (38.68%), Postives = 62/106 (58.49%), Query Frame = 1 Query: 10 NKSLIENSAITLGRLAWVCPELVSPHMEHFMQPWCIALSMIRDDTEKEDAFRGLCAMVKANPSGALSSLVFMCRAIASWHEIRSEELHNEVCQVLHGYKQMLRNGA 327 N +++EN AIT+GRL PELV+PH+E F QPW + + ++ EK+ AFRG C ++ NP ALS L+ M + +E S EL + ++L G ++ A Sbjct: 788 NTTVLENVAITIGRLGVYNPELVAPHLELFYQPWFEIIKTVGENEEKDSAFRGFCNILACNPQ-ALSYLLPMFVLCVAEYENPSAELRDMFQKILQGSVELFNGKA 892 The following BLAST results are available for this feature:
BLAST of DY305431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY305431 ID=DY305431; Name=DY305431; organism=Citrus clementina; type=EST; length=1244bpback to top |