DY306207
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY306207 vs. ExPASy Swiss-Prot
Match: SKI11_ARATH (F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana GN=SKIP11 PE=1 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 6.605e-30 Identity = 90/188 (47.87%), Postives = 110/188 (58.51%), Query Frame = 3 Query: 438 MLEGRC---LLTSREITSLCHPESKWS--YMTCMIDL----NGKRPLEIDGDDDCHHQRNKSLKL---------SNSRKTAGTSREQSDDDQGSDDNLQSEDNHQADDHQQSNAGHSSDLDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRLRRLNGVIEHWV*FSWPLLEXKA 947 MLE R L++R +S ES WS YM D NGKR LE+ G+ ++ KSLKL +S + EQ+D G + + E Q+D + N G SSD SLI IGRDNSI CLIRCSRSDYGSIASLN++FRSL++SGE+YRLRR NG +EHWV FS LLE A Sbjct: 1 MLEDRSPDSCLSTRVFSSSRLSESNWSNSYMYPEDDDKLLGNGKRALEVVGEV----RQTKSLKLMGFSIIYDSDSSDYSLSGGEEQADAAIGDGSSSRQEQEQQSDFND--NGGDSSDSHSLINEIGRDNSIDCLIRCSRSDYGSIASLNRNFRSLVKSGEIYRLRRQNGFVEHWVYFSCQLLEWVA 182
BLAST of DY306207 vs. ExPASy Swiss-Prot
Match: FBK15_ARATH (F-box/kelch-repeat protein At1g26930 OS=Arabidopsis thaliana GN=At1g26930 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.421e-26 Identity = 71/173 (41.04%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 438 MLEGR---CLLTSREITSLCHPESKWSYMTCMIDLNGKRPLEIDGDDDCHHQRNKSLKLSNSRKTAGTSREQSDDDQGSDDNLQSEDNHQADDHQQSNAGHSSDLDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRLRRLNGVIEHWV*FSWPLLEXKA 947 M EGR L S T H E+KWS++ ++GKR + + D H ++ L + D+ + EDN G SSD +LI + RD+S+SCLIRCSR+DY SIAS+N+S RSLIRSGE+YRLRRL G +EHWV FS L E +A Sbjct: 1 MFEGRPRDSCLVSTLFTMPSHKETKWSFL-----VSGKRSFLNNDESDLHFKKMYKL---------------------TTDSSEGEDN-----------GSSSDSGTLIPGMNRDDSLSCLIRCSRADYCSIASVNRSLRSLIRSGEIYRLRRLQGTLEHWVYFSCHLNEWEA 136 HSP 2 Score: 30.4166 bits (67), Expect = 1.421e-26 Identity = 12/20 (60.00%), Postives = 13/20 (65.00%), Query Frame = 2 Query: 947 FGPIRRRGMHLPKMTSNECF 1006 F P +R MHLP M NECF Sbjct: 137 FDPRSKRWMHLPSMPQNECF 156
BLAST of DY306207 vs. ExPASy Swiss-Prot
Match: FBK29_ARATH (F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana GN=At1g74510 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 2.761e-24 Identity = 65/171 (38.01%), Postives = 95/171 (55.56%), Query Frame = 3 Query: 438 MLEGRCLLTSREITSLCHPESKWSYMT-CMIDLNGKRPLEIDGDDDCHHQRNKSLKLSNSRKTAGTSREQSDDDQGSDDNLQSEDNHQADDHQQSNAGHSSDLDSLIQPIGRDNSISCLIRCSRSDYGSIASLNQSFRSLIRSGELYRLRRLNGVIEHWV*FSWPLLEXKA 947 MLE L SR++ S C ESKW Y C++ L+ ++ L +D D K L++ + SR +SD D+LQ +Q+ + Q G S + + ++ ++CL CS SD+GSIAS N++FRSLI+ ELYRLRR G++EHW+ FS LLE +A Sbjct: 1 MLEAPSYLVSRDLPSSCEEESKWIYNAHCVLQLSLRKRL-LDDTDVEGSSAKKMLRVDHG------SRGESDK---ITDSLQLAKTYQSSNQSQQGGGGDQQ-SSPVTRLDQNALLNCLAHCSLSDFGSIASTNRTFRSLIKDSELYRLRRAKGIVEHWIYFSCRLLEWEA 160 HSP 2 Score: 26.9498 bits (58), Expect = 2.761e-24 Identity = 12/25 (48.00%), Postives = 15/25 (60.00%), Query Frame = 2 Query: 947 FGPIRRRGMHLPKMTSNECFCGSKK 1021 + P R + +PKMT NECF S K Sbjct: 161 YDPNGDRWLRVPKMTFNECFMCSDK 185 The following BLAST results are available for this feature:
BLAST of DY306207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DY306207 ID=DY306207; Name=DY306207; organism=Citrus clementina; type=EST; length=1022bpback to top |