EG026394

Overview
NameEG026394
Unique NameEG026394
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12748 contig Ccv1_Contig12748:525..1080. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EG026394 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.444e-16
Identity = 38/50 (76.00%), Postives = 44/50 (88.00%), Query Frame = 3 
Query:    3 KDNVCRSVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 152
            KDNV RSVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   62 KDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of EG026394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.444e-1676.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA3AD07ZM1 AbsAOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG026394 ID=EG026394; Name=EG026394; organism=Citrus clementina; type=EST; length=556bp
GTAAGGACAACGTGTGCAGGAGCGTGTTTCACCCCGGTAGCAACCTTGCT
ACTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACACATCCTAACTC
TCCCACTGTTTATGACTGGCTTTACAGTGGGGAGACTAGGAGCAAGCATC
ATCACTGAGTGGATGATACGCTCCAGCGATGTAAATGAATGTGATGGGTC
ACCAACTCACCGGATGAGTTGCCTGCAGTCTGTAGATAGTGTCGTTTCGT
TTTGGATTTCGCAACGTGTCCTTGTCGTTTTTGTTAATGCTATTTGTATT
ACGTGTCCTTCCTATCTAAAGTTTGGTTTTAAATGCTGCTGACTAAAAAG
TAAACCAAAGACTGTGTGATGTTTTATATCATATAATTGTATGTGACGTG
AGGATTGCCTAAGCTTGTGGGCGGAGATGAAAGGTTACTGGTTTTTGGGT
TTAGGACATGTTTTTGATTGTCATTTTGTAAGAGCCAAGATCATCCCTTC
GTGGACGGTCGTGATGAGCATATATGTTTTATTATTAATAAATAAGTTGC
TTCTCT
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