EG026703
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.408e-31 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NL+WGVD ALETLF EQGKV++AKV YDR+SGRSRGFGFVTYSSAEEV+NAI+SL+GVDL GRAIRVS AEARP RRQF Sbjct: 194 NLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273 HSP 2 Score: 70.8626 bits (172), Expect = 2.300e-12 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQ 237 NL + D AL LF G V +V YD+ +GRSRGFGFVT SS EEV+ A NG +L GRA+RV+ + P++R+ Sbjct: 93 NLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-SGPPPEKRE 170
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.408e-31 Identity = 66/80 (82.50%), Postives = 73/80 (91.25%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NL+WGVD ALETLF EQGKV++AKV YDR+SGRSRGFGFVTYSSAEEV+NAI+SL+GVDL GRAIRVS AEARP RRQF Sbjct: 200 NLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279 HSP 2 Score: 70.8626 bits (172), Expect = 2.300e-12 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF*AVAETS 261 NL + D AL LF G V +V YD+ +GRSRGFGFVT SS EEV+ A NG +L GRA+RV+ + P++R+ + E S Sbjct: 93 NLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQFNGYELDGRALRVN-SGPPPEKRENSSFRENS 178
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC2_NICPL (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.026e-29 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NLSWGVDDLAL+ LF EQG V++AKV YDR+SGRSRGFGFVTYSSA+EV++AIDSLNG+DL GR+IRVS AE RP RRQF Sbjct: 214 NLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDAIDSLNGIDLDGRSIRVSAAEERP-RRQF 292 HSP 2 Score: 72.4034 bits (176), Expect = 7.906e-13 Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL + VD AL LF G V +V YD+ SGRSRGFGFVT S+ EEV+ A NG ++ GRAIRV+ A +R Sbjct: 94 NLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKR 170
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC2_NICSY (29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.028e-28 Identity = 63/80 (78.75%), Postives = 72/80 (90.00%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NLSWGVDDLAL+ LF EQG V++AKV YDR+SGRSRGFGFVTYSS++EV++AIDSLNGVDL GR+IRVS AE RP RRQF Sbjct: 213 NLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDAIDSLNGVDLDGRSIRVSAAEERP-RRQF 291 HSP 2 Score: 71.633 bits (174), Expect = 1.349e-12 Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL + VD AL LF G V +V YD+ +GRSRGFGFVT S+ EEV+ A NG ++ GRAIRV+ A +R Sbjct: 93 NLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFVTMSTKEEVEAAEQQFNGYEIDGRAIRVNAGPAPAKR 169
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 1.342e-28 Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NLSWGVDD+ALE+LF EQGKV+EA+V YDR+SGRS+GFGFVTY S++EV NAI SL+G DL GR IRVS AEARP RRQ+ Sbjct: 210 NLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289 HSP 2 Score: 69.707 bits (169), Expect = 5.125e-12 Identity = 36/77 (46.75%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL + VD L LF G V +V YD+ +GRSRGFGFVT SS EV+ A NG +L GR +RV+ P+R Sbjct: 97 NLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKR 173
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 8.701e-28 Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NLSWGVDD+ALE LF EQGKV+EA+V YDR+SGRS+GFGFVT SS++EV AI+SLNG DL GR IRVS AEARP R QF Sbjct: 263 NLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAEARPPRGQF 342 HSP 2 Score: 71.633 bits (174), Expect = 1.349e-12 Identity = 36/79 (45.57%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQ 237 NLS+ VD L LF G V +V YD+ +GRSRGFGFVT S+A EV+ A NG + GR +RV+ P+R + Sbjct: 105 NLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREE 183
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC3_ARATH (31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP31 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.217e-21 Identity = 50/80 (62.50%), Postives = 62/80 (77.50%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 NL W VD+ LE LF E GKV+EA+V YDRE+GRSRGFGFVT S +E++ AI +L+G +L GRAIRV+VAE RP RR + Sbjct: 250 NLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329 HSP 2 Score: 67.781 bits (164), Expect = 1.947e-11 Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL++ V+ AL LF + G V A+V Y+RE+ +SRGFGFVT SS +E + A++ N DL GR + V+ A R R Sbjct: 156 NLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSR 232
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC4_NICSY (31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 2.997e-20 Identity = 47/80 (58.75%), Postives = 59/80 (73.75%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 N+ WG+DD LE LF E GKV+ A+V YDRE+GRSRGFGFVT +S E+ +AI +L+G L GR IRV+VAE R +R F Sbjct: 236 NIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRRNTF 315
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC1_SPIOL (28 kDa ribonucleoprotein, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 1.943e-19 Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL W VD LE LF E GKV+ A+V DRE+GRSRGFGFVT SS EV++AI +L+G L GRA+RV+VAE RP+R Sbjct: 155 NLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRR 231 HSP 2 Score: 67.0106 bits (162), Expect = 3.322e-11 Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEAR--PQR 231 NL + VD L +F G V A+V Y+RE+ RSRGFGFVT S+ EE + A++ LNG D+ GR + V+ A R P+R Sbjct: 61 NLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVELLNGYDMDGRQLTVNKAAPRGSPER 139
BLAST of EG026703 vs. ExPASy Swiss-Prot
Match: ROC3_NICSY (28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 2.537e-19 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 240 N+ W +DD LE +F E GKV+ A+V +DRESGRSRGFGFVT SS E+ AI +L+G L GR IRV+ AE RP+R + Sbjct: 197 NIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRRNTY 276 HSP 2 Score: 66.6254 bits (161), Expect = 4.338e-11 Identity = 35/77 (45.45%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 1 NLSWGVDDLALETLFREQGKVLEAKVAYDRESGRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQR 231 NL + +D L LF++ G V A+V Y+RE+ RSRGFGFVT S+ EE D A++ + DL GR + V+ A R R Sbjct: 103 NLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVELYSQYDLNGRLLTVNKAAPRGSR 179 The following BLAST results are available for this feature:
BLAST of EG026703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EG026703 ID=EG026703; Name=EG026703; organism=Citrus clementina; type=EST; length=397bpback to top |