EH406255

Overview
NameEH406255
Unique NameEH406255
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
AbsCOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15071 contig Ccv1_Contig15071:287..1041. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_DICDI (NADH-cytochrome b5 reductase 1 OS=Dictyostelium discoideum GN=cyb5r1 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.755e-58
Identity = 102/189 (53.97%), Postives = 139/189 (73.54%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYTSEMLFQF 584
            G+EV +PYTP + D + G+F+L+IK+Y +G MS +   M +GD + VKGPKG+F YQP   ++ GM AGG+GITPM QV +AIL+NP+DKT++ L++ N+T EDILLK+ELD  A K+P QF +YYVLN PP+ W  GVGFVSKE+I++  P+P+    V+ CGPP MNKAM  HLE +G+    +F F
Sbjct:   99 GKEVYRPYTPISSDEERGYFDLLIKVYEKGAMSGYVDNMFIGDSIEVKGPKGKFNYQPNMRKSIGMLAGGTGITPMLQVIKAILKNPSDKTEISLVFGNITEEDILLKKELDELAEKHP-QFKVYYVLNNPPKGWTQGVGFVSKEIIESRLPSPSDQTMVIMCGPPMMNKAMTGHLETIGFNESNIFTF 286          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_USTMA (NADH-cytochrome b5 reductase 1 OS=Ustilago maydis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.700e-58
Identity = 105/181 (58.01%), Postives = 132/181 (72.93%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G+ V++ YTPT+ D D G F+LV+K Y QG +S +   M++GD L+VKGPKG+ RY PG  R  GM AGG+G+TP  Q+ RA L+NP DKT++  IYANV   DILLK+ELD  A K+ DQF I Y LN+ PE W GGVGFV+KE ++ + P PA+DI+VL CGPPPM KAM  HLEALGY
Sbjct:  128 GKTVVRSYTPTSSDDDHGFFDLVVKSYEQGNVSKYIGSMKIGDLLSVKGPKGQMRYAPGLSRHIGMIAGGTGLTPCLQIIRAALKNPADKTQIDFIYANVKETDILLKDELDELALKHKDQFRISYFLNEAPEGWKGGVGFVTKEALEKNLPKPANDIKVLMCGPPPMIKAMTGHLEALGY 308          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_MORAP (NADH-cytochrome b5 reductase 1 OS=Mortierella alpina GN=CBR1 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 6.787e-57
Identity = 103/181 (56.91%), Postives = 133/181 (73.48%), Query Frame = 3
Query:   18 GEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G+++ + YTPT+   DVGHF L IK YPQG +S  F E+ +GD +  +GPKG+F Y P   RA GM AGG+G+TPM Q+ RAI++NP DKT+V+ I+ANVT EDI+LK ELD  + K+P QF +YYVLN  PE W GGVGFV+ +MI+ H PAPA+DI+VL CGPPPM  AM+   + LGY
Sbjct:  103 GKDISRSYTPTSSSDDVGHFVLCIKSYPQGNISKMFSELSIGDSINARGPKGQFSYTPNMCRAIGMIAGGTGLTPMLQIIRAIVKNPEDKTQVNFIFANVTEEDIILKAELDLLSQKHP-QFKVYYVLNNAPEGWTGGVGFVNADMIKEHMPAPAADIKVLLCGPPPMVSAMSKITQDLGY 282          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_CANAL (NADH-cytochrome b5 reductase 1 OS=Candida albicans GN=CBR1 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.579e-56
Identity = 98/186 (52.69%), Postives = 131/186 (70.43%), Query Frame = 3
Query:    3 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G    G+EV++ YTP + D  +GHF+L+IK Y  G +S H     VG+++ ++GPKG F Y P  V++FGM AGG+GI PM+Q+  AIL+NP DKTK+HL+YANVT  DILLKEELD FAA++PD+  I+YVLN+ P +W G VGFV+ E+I TH P  ++D  +L CGPPPM  AM      LG+
Sbjct:   93 GATIDGKEVVRSYTPISTDDQLGHFDLLIKTYENGNISRHVAGKNVGEHIEIRGPKGFFTYTPNMVKSFGMIAGGTGIAPMYQIITAILKNPEDKTKIHLVYANVTESDILLKEELDNFAARHPDRLKIHYVLNEAPANWQGSVGFVTPEIIDTHLPKASNDTNLLLCGPPPMVSAMKKAAVELGF 278          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_NEOFI (NADH-cytochrome b5 reductase 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=cbr1 PE=3 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 8.296e-55
Identity = 101/190 (53.16%), Postives = 135/190 (71.05%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 563
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++ N      ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP+ W GGVGFV+ EMI+ H PAPASD+++L CGPPPM  AM    E+LGYT
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDKLAAEDPD-FNIYYVLNNPPQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMISAMKKATESLGYT 294          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_DEBHA (NADH-cytochrome b5 reductase 1 OS=Debaryomyces hansenii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.084e-54
Identity = 97/186 (52.15%), Postives = 129/186 (69.35%), Query Frame = 3
Query:    3 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G     +EV++ YTP + D ++G+F+L+IK Y  G +S H    ++G+ + ++GPKG F Y PG V +FGM AGG+GITPM+Q+  AIL NP DKTKV L+YANVT +DILLKEEL+  A ++PD+F IYYVLN PPE+W GGVGFV+ E++  H P  +    +L CGPPPM  AM      LGY
Sbjct:   83 GATINDKEVVRSYTPISTDDELGYFDLLIKAYENGNISRHVESKKIGETIDIRGPKGFFTYTPGMVESFGMIAGGTGITPMYQILTAILRNPEDKTKVSLVYANVTEDDILLKEELNKMAREHPDRFKIYYVLNTPPENWTGGVGFVTPEIMDKHLPKASEATNLLLCGPPPMISAMKKAAVGLGY 268          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPFU (NADH-cytochrome b5 reductase 1 OS=Aspergillus fumigatus GN=cbr1 PE=3 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.084e-54
Identity = 101/190 (53.16%), Postives = 135/190 (71.05%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 563
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S +   +++GD + V+GPKG   Y P   R  GM AGG+GITPM Q+ +A++ N      ND TK+ LI+ANV  +DILLKEELD  AA+ PD F IYYVLN PP+ W GGVGFV+ EMI+ H PAPASD+++L CGPPPM  AM    E+LGYT
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKYLTTLKIGDTMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQIIKAVIRNRPRNGGNDTTKLDLIFANVNPDDILLKEELDMLAAEDPD-FNIYYVLNNPPQGWTGGVGFVTPEMIKEHLPAPASDVKILLCGPPPMISAMKKATESLGYT 294          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_COCIM (NADH-cytochrome b5 reductase 1 OS=Coccidioides immitis GN=CBR1 PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 7.023e-54
Identity = 103/187 (55.08%), Postives = 130/187 (69.52%), Query Frame = 3
Query:   15 QGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILE-----NPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            Q +E+++ YTP + D D G+F+L++K YPQG +S H   +R+GD + V+GPKG   Y P  VR  GM AGG+GITPM QV +AI++       ND T++ LI+ANV  +DILLKEELD   AK  D F IYYVLN PPE WNGGVGFV+ +MI+   PAPA DI+VL CGPPPM  AM    E+LGY
Sbjct:  107 QSKEIVRSYTPISSDDDAGYFDLLVKSYPQGNISKHLTTLRIGDKMKVRGPKGAMVYTPNMVRHIGMIAGGTGITPMLQVIKAIIKGRPRNGGNDTTQIDLIFANVNPDDILLKEELDQL-AKEDDAFRIYYVLNNPPEKWNGGVGFVTPDMIKAKLPAPAGDIKVLICGPPPMVSAMKKATESLGY 292          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_PICGU (NADH-cytochrome b5 reductase 1 OS=Pichia guilliermondii GN=CBR1 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.172e-54
Identity = 98/186 (52.69%), Postives = 129/186 (69.35%), Query Frame = 3
Query:    3 GKDSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILENPNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGY 560
            G    G+EV++ YTP + D ++G+F+L+IK Y QG +S H     VGD++ V+GPKG F Y P  V   GM AGG+GI PM+QV  AIL NP+DKTK+ L+YANVT EDILL+ ELD FA ++PD+F ++YVLN  PE+WNG VGFV+ E+++ H P    D  +L CGPPPM  AM  +   LGY
Sbjct:   83 GATINGKEVVRSYTPISRDDELGYFDLLIKTYEQGNISRHVDSKSVGDHIEVRGPKGFFTYTPNMVEHLGMIAGGTGIAPMYQVLTAILTNPDDKTKISLVYANVTEEDILLRAELDLFAKEHPDRFKVHYVLNNAPENWNGSVGFVTPEIMEKHLPNKDQDGYLLLCGPPPMISAMKKNAVTLGY 268          
BLAST of EH406255 vs. ExPASy Swiss-Prot
Match: NCB5R_ASPCL (NADH-cytochrome b5 reductase 1 OS=Aspergillus clavatus GN=cbr1 PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.565e-53
Identity = 104/190 (54.74%), Postives = 132/190 (69.47%), Query Frame = 3
Query:    9 DSQGEEVIKPYTPTTLDSDVGHFELVIKMYPQGRMSHHFREMRVGDYLAVKGPKGRFRYQPGQVRAFGMTAGGSGITPMFQVTRAILEN-----PNDKTKVHLIYANVTYEDILLKEELDGFAAKYPDQFTIYYVLNQPPESWNGGVGFVSKEMIQTHCPAPASDIQVLRCGPPPMNKAMAAHLEALGYT 563
            + Q +EV++ YTP + D++ G+F+L++K YPQG +S H   ++VGD + V+GPKG   Y P   R  GM AGG+GITPM QV +AI+ N       D TKV LI+ANV  EDILLKEELD  AA+  D F IYYVLN PP+ W GGVGFV+ EMI+   PAPASD++VL CGPPPM  AM    E+LG+T
Sbjct:  106 EGQPKEVVRSYTPISSDNEAGYFDLLVKAYPQGNISKHLTTLKVGDVMKVRGPKGAMVYTPNMCRHIGMIAGGTGITPMLQVIKAIIRNRPRNGGTDITKVDLIFANVNPEDILLKEELDKLAAEDED-FNIYYVLNNPPQGWTGGVGFVTPEMIKERLPAPASDVKVLLCGPPPMISAMKKATESLGFT 294          
The following BLAST results are available for this feature:
BLAST of EH406255 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
NCB5R_DICDI2.755e-5853.97NADH-cytochrome b5 reductase 1 OS=Dictyostelium di... [more]
NCB5R_USTMA4.700e-5858.01NADH-cytochrome b5 reductase 1 OS=Ustilago maydis ... [more]
NCB5R_MORAP6.787e-5756.91NADH-cytochrome b5 reductase 1 OS=Mortierella alpi... [more]
NCB5R_CANAL2.579e-5652.69NADH-cytochrome b5 reductase 1 OS=Candida albicans... [more]
NCB5R_NEOFI8.296e-5553.16NADH-cytochrome b5 reductase 1 OS=Neosartorya fisc... [more]
NCB5R_DEBHA1.084e-5452.15NADH-cytochrome b5 reductase 1 OS=Debaryomyces han... [more]
NCB5R_ASPFU1.084e-5453.16NADH-cytochrome b5 reductase 1 OS=Aspergillus fumi... [more]
NCB5R_COCIM7.023e-5455.08NADH-cytochrome b5 reductase 1 OS=Coccidioides imm... [more]
NCB5R_PICGU9.172e-5452.69NADH-cytochrome b5 reductase 1 OS=Pichia guillierm... [more]
NCB5R_ASPCL1.565e-5354.74NADH-cytochrome b5 reductase 1 OS=Aspergillus clav... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAB2BC05ZM1 AbsCOv1 Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EH406255 ID=EH406255; Name=EH406255; organism=Citrus clementina; type=EST; length=755bp
GGGGCAAGGATAGTCAGGGTGAAGAGGTTATTAAACCATATACCCCAACC
ACATTGGATTCTGATGTTGGTCATTTTGAATTGGTTATTAAGATGTACCC
CCAAGGAAGGATGTCACACCATTTCCGTGAGATGCGTGTTGGTGATTATC
TTGCCGTGAAGGGACCCAAGGGTCGATTCAGGTATCAACCTGGCCAGGTC
AGAGCATTTGGGATGACTGCAGGAGGTTCTGGCATCACTCCAATGTTCCA
AGTTACTAGAGCCATATTAGAGAACCCAAATGACAAGACAAAGGTGCACC
TCATTTATGCCAATGTTACATATGAGGACATTCTTTTAAAGGAAGAATTG
GATGGATTTGCGGCGAAGTACCCTGATCAATTCACAATCTACTATGTGTT
GAATCAGCCTCCTGAATCGTGGAATGGTGGTGTTGGCTTTGTCTCAAAGG
AAATGATTCAAACCCATTGTCCCGCACCTGCTTCTGATATTCAGGTTCTG
AGATGTGGTCCACCACCAATGAACAAGGCCATGGCTGCTCACCTCGAGGC
ACTTGGATATACTTCAGAAATGCTGTTCCAGTTCTGATCACTTCCATAAG
GTTGTCCAATTATTTGGACTGATATTCGTCACTCCTATTCGGTCCACATA
AAGAACTTTTTTACATCTCTTTTAAGCTGTATTTTGTTTCTCCTGTGACT
AAAGAAGCCGATGAAACCGGAGCATGGATTTTGTAATTGATCTTTTGCTT
TAACC
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